mRNA_F-serratus_M_contig1235.1772.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1235.1772.1
Unique NamemRNA_F-serratus_M_contig1235.1772.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig1235.1772.1 vs. uniprot
Match: A0A6H5KV08_9PHAE (cobW domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KV08_9PHAE)

HSP 1 Score: 401 bits (1031), Expect = 7.930e-136
Identity = 200/230 (86.96%), Postives = 216/230 (93.91%), Query Frame = 1
Query:  178 YQEHGHTHEHMEHPGTYSDRDPPLLDRSLSERAFTVGIGGPVGSGKTALMLELCKALREELSIGAVTNDIFTREDAEFLTKNAALEEGRIAAIETGGCPHAAIREDISANLMACEMLTARHQADMILMESGGDNLAANYSRELADYIIYVIDVAGGDKVPRKGGPGITQSDLLVINKTDLAEAVGADLEVMRRESKVMRGEGHTVFAQVKKGVGVDEIKALILAAYEAFK 867
            + EHGHTHEHM+HPG ++DR+PP  DR+L+ER++TVGIGGPVGSGKTALMLELCK LR+ELSIGAVTNDIFTREDAEFLTKN+ALEEGRI AIETGGCPHAAIREDISANL ACE LTARH+ D+IL+ESGGDNLAANYSRELADYIIYVIDVAGGDKVPRKGGPGITQSDLLVINKTDLAEAVGADLEVMRRE+KVMRGEG T+FAQVKKGVGV EIKALIL  YEA K
Sbjct:   44 FAEHGHTHEHMDHPGFFADREPPQPDRALAERSYTVGIGGPVGSGKTALMLELCKLLRDELSIGAVTNDIFTREDAEFLTKNSALEEGRILAIETGGCPHAAIREDISANLGACETLTARHETDIILVESGGDNLAANYSRELADYIIYVIDVAGGDKVPRKGGPGITQSDLLVINKTDLAEAVGADLEVMRREAKVMRGEGDTIFAQVKKGVGVGEIKALILKHYEAAK 273          
BLAST of mRNA_F-serratus_M_contig1235.1772.1 vs. uniprot
Match: A0A836CD81_9STRA (Urease accessory protein ureG n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CD81_9STRA)

HSP 1 Score: 346 bits (887), Expect = 5.450e-114
Identity = 172/224 (76.79%), Postives = 192/224 (85.71%), Query Frame = 1
Query:  205 HMEHPGTYSDRDPPLLDRSLSERAFTVGIGGPVGSGKTALMLELCKALREELSIGAVTNDIFTREDAEFLTKNAALEEGRIAAIETGGCPHAAIREDISANLMACEMLTARHQADMILMESGGDNLAANYSRELADYIIYVIDVAGGDKVPRKGGPGITQSDLLVINKTDLAEAVGADLEVMRRESKVMRGEGHTVFAQVKKGVGVDEIKALILAAYEAFKTTC 876
            H+EH G + +R+PPL  R L +RAFTVGIGGPVGSGKTALMLELCK LR+  SI AVTNDIFTREDAEFLT+NAAL E RIAAIETGGCPHAAIREDISANL ACE++T RH  D++L+ESGGDNLAANYSRELADYIIYVIDVAGGDKVPRKGGPGITQSDL VINK DLA+AVGADL VMRR+S +MRG+G TVFAQVK GVGVD+I   IL+ ++     C
Sbjct:   49 HLEHAGCFHEREPPLNSRDLKDRAFTVGIGGPVGSGKTALMLELCKRLRDNYSIAAVTNDIFTREDAEFLTRNAALAEDRIAAIETGGCPHAAIREDISANLSACEIMTTRHACDIVLVESGGDNLAANYSRELADYIIYVIDVAGGDKVPRKGGPGITQSDLFVINKIDLADAVGADLAVMRRDSLLMRGDGPTVFAQVKHGVGVDDIVKYILSDHKRMVDAC 272          
BLAST of mRNA_F-serratus_M_contig1235.1772.1 vs. uniprot
Match: A0A261Y2A4_9FUNG (Putative urease accessory protein ureG-like n=1 Tax=Bifiguratus adelaidae TaxID=1938954 RepID=A0A261Y2A4_9FUNG)

HSP 1 Score: 335 bits (860), Expect = 4.470e-110
Identity = 172/228 (75.44%), Postives = 192/228 (84.21%), Query Frame = 1
Query:  181 QEHGHTHEHMEHPGTYSDRDPPLL-DRSLSERAFTVGIGGPVGSGKTALMLELCKALREELSIGAVTNDIFTREDAEFLTKNAALEEGRIAAIETGGCPHAAIREDISANLMACEMLTARHQADMILMESGGDNLAANYSRELADYIIYVIDVAGGDKVPRKGGPGITQSDLLVINKTDLAEAVGADLEVMRRESKVMRGEGHTVFAQVKKGVGVDEIKALILAAYEA 861
            QEHGHTHE ++HPG Y++R P    DRS  ERAFTVGIGGPVGSGKTALML LC+ LRE+ SI AVTNDIFT+ED EFL +N AL E RIAAIETGGCPHAAIRED+SANL A E L A+    ++L+ESGGDNLAANYSRELADYIIYVIDVAGGDKVPRKGGPGITQSDLL+INKTDLA+ VGADL VM R++K MRG G TVFAQVK GVGVDEI +LIL  ++A
Sbjct:   37 QEHGHTHEQLDHPGFYAERPPVNYGDRSWRERAFTVGIGGPVGSGKTALMLALCQRLREQYSIAAVTNDIFTKEDTEFLIRNKALPEERIAAIETGGCPHAAIREDVSANLNALEKLHAKFNTQLLLIESGGDNLAANYSRELADYIIYVIDVAGGDKVPRKGGPGITQSDLLIINKTDLADIVGADLSVMDRDAKKMRGSGPTVFAQVKNGVGVDEIISLILGEWKA 264          
BLAST of mRNA_F-serratus_M_contig1235.1772.1 vs. uniprot
Match: W3X1K9_PESFW (Urease accessory protein ureG-like protein n=2 Tax=Sporocadaceae TaxID=1812776 RepID=W3X1K9_PESFW)

HSP 1 Score: 328 bits (842), Expect = 2.340e-107
Identity = 170/237 (71.73%), Postives = 198/237 (83.54%), Query Frame = 1
Query:  154 GINIEGMNYQEHGHTHEHMEHPGTYSDRDPPLLD-RSLSERAFTVGIGGPVGSGKTALMLELCKALREELSIGAVTNDIFTREDAEFLTKNAALEEGRIAAIETGGCPHAAIREDISANLMACEMLTARHQADMILMESGGDNLAANYSRELADYIIYVIDVAGGDKVPRKGGPGITQSDLLVINKTDLAEAVGADLEVMRRESKVMRGEGHTVFAQVKKGVGVDEIKALILAAYEA 861
            G + +G +  +HGH+HE ++ PG+Y  R+ P+++ R  SERAFTVGIGGPVGSGKTALML LC ALRE+ SI AVTNDIFTREDAEFLTKN AL   RI AIETGGCPHAA+REDISANL A E L     +D++L+ESGGDNLAANYSRELADYIIYVIDV+GGDKVPRKGGPGITQSDLLV+NKTDLAEAVGADL+VM R+++ MR  G TVFAQVKKGV VD I  LI++A++A
Sbjct:   12 GHSHDGFSAADHGHSHEILDGPGSYIGREMPIVEGREWSERAFTVGIGGPVGSGKTALMLALCLALREKYSIAAVTNDIFTREDAEFLTKNKALPAPRIRAIETGGCPHAAVREDISANLAALEDLHREFGSDILLIESGGDNLAANYSRELADYIIYVIDVSGGDKVPRKGGPGITQSDLLVVNKTDLAEAVGADLDVMERDARKMREGGPTVFAQVKKGVAVDHIVNLIISAWKA 248          
BLAST of mRNA_F-serratus_M_contig1235.1772.1 vs. uniprot
Match: UPI001D85A772 (CobW/HypB/UreG, nucleotide-binding domain-containing protein n=1 Tax=Microdochium trichocladiopsis TaxID=1682393 RepID=UPI001D85A772)

HSP 1 Score: 328 bits (841), Expect = 3.310e-107
Identity = 166/237 (70.04%), Postives = 198/237 (83.54%), Query Frame = 1
Query:  154 GINIEGMNYQEHGHTHEHMEHPGTYSDRDPPLLD-RSLSERAFTVGIGGPVGSGKTALMLELCKALREELSIGAVTNDIFTREDAEFLTKNAALEEGRIAAIETGGCPHAAIREDISANLMACEMLTARHQADMILMESGGDNLAANYSRELADYIIYVIDVAGGDKVPRKGGPGITQSDLLVINKTDLAEAVGADLEVMRRESKVMRGEGHTVFAQVKKGVGVDEIKALILAAYEA 861
            G + +  N  EHGH+HE ++ PG+Y  R+ P+++ R+  ERAFT+GIGGPVGSGKTALML+LC ALRE+ SI AVTNDIFTREDAEFLT+N AL   RI AIETGGCPHAA+REDISANL A E L A    D++++ESGGDNLAANYSRELAD+IIYVIDV+GGDK+PRKGGPGITQSDLL++NKTDLAEAVGADL VM R+++ MR  G TVFAQVKKGVGVD I  LI++A++A
Sbjct:   12 GHSHDNFNAAEHGHSHEILDGPGSYLSREMPIVEGRTWGERAFTIGIGGPVGSGKTALMLQLCLALREKYSIAAVTNDIFTREDAEFLTRNKALPAPRIRAIETGGCPHAAVREDISANLAALEDLHAEFDTDLLVIESGGDNLAANYSRELADFIIYVIDVSGGDKIPRKGGPGITQSDLLIVNKTDLAEAVGADLGVMERDARKMREGGPTVFAQVKKGVGVDHIVNLIISAWKA 248          
BLAST of mRNA_F-serratus_M_contig1235.1772.1 vs. uniprot
Match: A0A136JI93_9PEZI (CobW/HypB/UreG, nucleotide-binding domain-domain-containing protein n=2 Tax=Xylariales TaxID=37989 RepID=A0A136JI93_9PEZI)

HSP 1 Score: 328 bits (840), Expect = 4.680e-107
Identity = 166/237 (70.04%), Postives = 198/237 (83.54%), Query Frame = 1
Query:  154 GINIEGMNYQEHGHTHEHMEHPGTYSDRDPPLLD-RSLSERAFTVGIGGPVGSGKTALMLELCKALREELSIGAVTNDIFTREDAEFLTKNAALEEGRIAAIETGGCPHAAIREDISANLMACEMLTARHQADMILMESGGDNLAANYSRELADYIIYVIDVAGGDKVPRKGGPGITQSDLLVINKTDLAEAVGADLEVMRRESKVMRGEGHTVFAQVKKGVGVDEIKALILAAYEA 861
            G + +  N  EHGH+HE ++ PG+Y  R+ P+++ R+  ERAFT+GIGGPVGSGKTALML+LC ALRE+ SI AVTNDIFTREDAEFLT+N AL   RI AIETGGCPHAA+REDISANL A E L A    D++++ESGGDNLAANYSRELAD+IIYVIDV+GGDK+PRKGGPGITQSDLL++NKTDLAEAVGADL VM R+++ MR  G TVFAQVKKGVGVD I  LI++A++A
Sbjct:   12 GHSHDSFNAAEHGHSHEILDGPGSYLSREMPIVEGRTWGERAFTIGIGGPVGSGKTALMLQLCLALREKYSIAAVTNDIFTREDAEFLTRNKALPAPRIRAIETGGCPHAAVREDISANLAALEDLHAEFDTDLLVIESGGDNLAANYSRELADFIIYVIDVSGGDKIPRKGGPGITQSDLLIVNKTDLAEAVGADLGVMERDARKMREGGPTVFAQVKKGVGVDHIVNLIVSAWKA 248          
BLAST of mRNA_F-serratus_M_contig1235.1772.1 vs. uniprot
Match: A0A162U528_PHYB8 (cobW domain-containing protein n=1 Tax=Phycomyces blakesleeanus (strain ATCC 8743b / DSM 1359 / FGSC 10004 / NBRC 33097 / NRRL 1555) TaxID=763407 RepID=A0A162U528_PHYB8)

HSP 1 Score: 327 bits (838), Expect = 1.150e-106
Identity = 167/232 (71.98%), Postives = 189/232 (81.47%), Query Frame = 1
Query:  169 GMNYQEHGHTHEHMEHPGTYSDRDPPLLD-RSLSERAFTVGIGGPVGSGKTALMLELCKALREELSIGAVTNDIFTREDAEFLTKNAALEEGRIAAIETGGCPHAAIREDISANLMACEMLTARHQADMILMESGGDNLAANYSRELADYIIYVIDVAGGDKVPRKGGPGITQSDLLVINKTDLAEAVGADLEVMRRESKVMRGEGHTVFAQVKKGVGVDEIKALILAAYEA 861
            G   QEHGHTHE M+HPG Y++R   + + R  SERAFTVGIGGPVGSGKTALML LC+ LRE+ S+ AVTNDIFT+ED EFL +  AL E RI AIETGGCPHAAIRED+SANL A E+L A+    ++L+ESGGDNLAANYSRELADYIIYVIDVAGGDKVPRKGGPGITQSDLLV+NKTDLAE +GADL VM R++K MRG G TVFAQVK GV VD+I  LIL  + A
Sbjct:   39 GRGTQEHGHTHEQMDHPGHYAERPKAIYNHRDWSERAFTVGIGGPVGSGKTALMLALCQRLREKYSVAAVTNDIFTKEDTEFLVREKALPEERIMAIETGGCPHAAIREDVSANLNALEVLHAKFNTQLLLIESGGDNLAANYSRELADYIIYVIDVAGGDKVPRKGGPGITQSDLLVVNKTDLAEIIGADLGVMARDAKKMRGNGPTVFAQVKNGVAVDDIINLILGEWRA 270          
BLAST of mRNA_F-serratus_M_contig1235.1772.1 vs. uniprot
Match: A0A2T3AQ63_AMORE (cobW domain-containing protein n=3 Tax=Leotiomycetes TaxID=147548 RepID=A0A2T3AQ63_AMORE)

HSP 1 Score: 327 bits (837), Expect = 1.370e-106
Identity = 167/225 (74.22%), Postives = 191/225 (84.89%), Query Frame = 1
Query:  187 HGHTHEHMEHPGTYSDRDPPLLD-RSLSERAFTVGIGGPVGSGKTALMLELCKALREELSIGAVTNDIFTREDAEFLTKNAALEEGRIAAIETGGCPHAAIREDISANLMACEMLTARHQADMILMESGGDNLAANYSRELADYIIYVIDVAGGDKVPRKGGPGITQSDLLVINKTDLAEAVGADLEVMRRESKVMRGEGHTVFAQVKKGVGVDEIKALILAAYE 858
            HGHTHE ++ PG+Y  R+ P+++ R+ SERAFTVGIGGPVGSGKTALML LC ALRE  SI AVTNDIFTREDAEFLTK+ AL   RI AIETGGCPHAA+REDISANL A E L     +D++L+ESGGDNLAANYSRELADYIIYVIDV+GGDK+PRKGGPGITQSDLLV+NKTDLAEAVGADL VM R+++ MR  G TVFAQVKKGVGVD I  LI++A++
Sbjct:   24 HGHTHEILDGPGSYMGREMPIIEGRNWSERAFTVGIGGPVGSGKTALMLALCNALRERYSIAAVTNDIFTREDAEFLTKHKALPANRIRAIETGGCPHAAVREDISANLAALEDLHREFTSDLLLIESGGDNLAANYSRELADYIIYVIDVSGGDKIPRKGGPGITQSDLLVVNKTDLAEAVGADLAVMDRDARKMREGGPTVFAQVKKGVGVDHIVGLIISAWK 248          
BLAST of mRNA_F-serratus_M_contig1235.1772.1 vs. uniprot
Match: G9N3Y0_HYPVG (cobW domain-containing protein n=31 Tax=Opisthokonta TaxID=33154 RepID=G9N3Y0_HYPVG)

HSP 1 Score: 327 bits (837), Expect = 1.420e-106
Identity = 167/233 (71.67%), Postives = 198/233 (84.98%), Query Frame = 1
Query:  166 EGMNYQEHGHTHEHMEHPGTYSDRDPPLLD-RSLSERAFTVGIGGPVGSGKTALMLELCKALREELSIGAVTNDIFTREDAEFLTKNAALEEGRIAAIETGGCPHAAIREDISANLMACEMLTARHQADMILMESGGDNLAANYSRELADYIIYVIDVAGGDKVPRKGGPGITQSDLLVINKTDLAEAVGADLEVMRRESKVMRGEGHTVFAQVKKGVGVDEIKALILAAYEA 861
            +G + QEHGH+HE ++ PG+Y  R+ P+++ R+ S+RAFT+GIGGPVGSGKTALML LC ALRE+ S+ AVTNDIFTREDAEFLT++AAL   RI AIETGGCPHAA+REDISANL A E L     +D++L+ESGGDNLAANYSRELAD+IIYVIDV+GGDKVPRKGGPGITQSDLLV+NKTDLAEAVGADL VM R+++ MR  G TVFAQVKK VGVD I  LIL+A++A
Sbjct:   15 DGFSAQEHGHSHEILDGPGSYIGREMPIVEGRNWSDRAFTIGIGGPVGSGKTALMLALCLALREKYSLAAVTNDIFTREDAEFLTRHAALPPQRIRAIETGGCPHAAVREDISANLAALEDLHTEFDSDLLLIESGGDNLAANYSRELADFIIYVIDVSGGDKVPRKGGPGITQSDLLVVNKTDLAEAVGADLGVMERDARKMREGGPTVFAQVKKDVGVDHIVNLILSAWKA 247          
BLAST of mRNA_F-serratus_M_contig1235.1772.1 vs. uniprot
Match: A0A0F4ZF67_9PEZI (cobW domain-containing protein n=3 Tax=Ceratocystidaceae TaxID=1028423 RepID=A0A0F4ZF67_9PEZI)

HSP 1 Score: 325 bits (833), Expect = 5.330e-106
Identity = 163/232 (70.26%), Postives = 197/232 (84.91%), Query Frame = 1
Query:  169 GMNYQEHGHTHEHMEHPGTYSDRDPPLLD-RSLSERAFTVGIGGPVGSGKTALMLELCKALREELSIGAVTNDIFTREDAEFLTKNAALEEGRIAAIETGGCPHAAIREDISANLMACEMLTARHQADMILMESGGDNLAANYSRELADYIIYVIDVAGGDKVPRKGGPGITQSDLLVINKTDLAEAVGADLEVMRRESKVMRGEGHTVFAQVKKGVGVDEIKALILAAYEA 861
            G N QEHGH+HE ++ PG+Y  R+ P+++ R+ ++RAFT+GIGGPVGSGKTALML LCKALR + +I AVTNDIFTREDAEFLT+N AL   RI AIETGGCPHAA+REDIS NL A E L  +   D++L+ESGGDNLAANYSRELAD+IIYVIDV+GGDK+PRKGGPGITQSDLL++NKTDLAEAVGADL VM R++++MR  G T+FAQVKK VGVD+I  LIL+A++A
Sbjct:   21 GFNAQEHGHSHEILDGPGSYLAREMPIVEGRNWNDRAFTIGIGGPVGSGKTALMLALCKALRTKYNIAAVTNDIFTREDAEFLTRNGALPAERIRAIETGGCPHAAVREDISLNLGALEDLHGQFSTDLLLIESGGDNLAANYSRELADFIIYVIDVSGGDKIPRKGGPGITQSDLLIVNKTDLAEAVGADLNVMERDARLMREGGPTIFAQVKKHVGVDDIVNLILSAWKA 252          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1235.1772.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KV08_9PHAE7.930e-13686.96cobW domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A836CD81_9STRA5.450e-11476.79Urease accessory protein ureG n=1 Tax=Tribonema mi... [more]
A0A261Y2A4_9FUNG4.470e-11075.44Putative urease accessory protein ureG-like n=1 Ta... [more]
W3X1K9_PESFW2.340e-10771.73Urease accessory protein ureG-like protein n=2 Tax... [more]
UPI001D85A7723.310e-10770.04CobW/HypB/UreG, nucleotide-binding domain-containi... [more]
A0A136JI93_9PEZI4.680e-10770.04CobW/HypB/UreG, nucleotide-binding domain-domain-c... [more]
A0A162U528_PHYB81.150e-10671.98cobW domain-containing protein n=1 Tax=Phycomyces ... [more]
A0A2T3AQ63_AMORE1.370e-10674.22cobW domain-containing protein n=3 Tax=Leotiomycet... [more]
G9N3Y0_HYPVG1.420e-10671.67cobW domain-containing protein n=31 Tax=Opisthokon... [more]
A0A0F4ZF67_9PEZI5.330e-10670.26cobW domain-containing protein n=3 Tax=Ceratocysti... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1235contigF-serratus_M_contig1235:43431..47499 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score403.7
Seed ortholog evalue7e-110
Seed eggNOG ortholog2880.D8LD20
Preferred nameUREG
KEGG koko:K03189
Hectar predicted targeting categoryother localisation
GOsGO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0019627,GO:0034641,GO:0043085,GO:0043603,GO:0044093,GO:0044237,GO:0044281,GO:0050790,GO:0065007,GO:0065009,GO:0071704,GO:0071941,GO:1901564
EggNOG free text desc.nickel cation binding
EggNOG OGs2QR6E@2759,COG0378@1
Ec32 ortholog descriptionCobW/HypB/UreG domain
Ec32 orthologEc-01_001950.1
COG Functional cat.KO
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000
Exons7
Model size1427
Cds size825
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929153.2234654-UTR-F-serratus_M_contig1235:43430..434871622929153.2234654-UTR-F-serratus_M_contig1235:43430..43487Fucus serratus maleUTRF-serratus_M_contig1235 43431..43487 +
1690962726.1349082-UTR-F-serratus_M_contig1235:43430..434871690962726.1349082-UTR-F-serratus_M_contig1235:43430..43487Fucus serratus maleUTRF-serratus_M_contig1235 43431..43487 +
1622929153.794821-UTR-F-serratus_M_contig1235:46954..474991622929153.794821-UTR-F-serratus_M_contig1235:46954..47499Fucus serratus maleUTRF-serratus_M_contig1235 46955..47499 +
1690962726.217532-UTR-F-serratus_M_contig1235:46954..474991690962726.217532-UTR-F-serratus_M_contig1235:46954..47499Fucus serratus maleUTRF-serratus_M_contig1235 46955..47499 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929153.2384548-CDS-F-serratus_M_contig1235:43487..435981622929153.2384548-CDS-F-serratus_M_contig1235:43487..43598Fucus serratus maleCDSF-serratus_M_contig1235 43488..43598 +
1690962726.1455526-CDS-F-serratus_M_contig1235:43487..435981690962726.1455526-CDS-F-serratus_M_contig1235:43487..43598Fucus serratus maleCDSF-serratus_M_contig1235 43488..43598 +
1622929153.2500544-CDS-F-serratus_M_contig1235:44743..448861622929153.2500544-CDS-F-serratus_M_contig1235:44743..44886Fucus serratus maleCDSF-serratus_M_contig1235 44744..44886 +
1690962726.1530302-CDS-F-serratus_M_contig1235:44743..448861690962726.1530302-CDS-F-serratus_M_contig1235:44743..44886Fucus serratus maleCDSF-serratus_M_contig1235 44744..44886 +
1622929153.2615218-CDS-F-serratus_M_contig1235:45129..451901622929153.2615218-CDS-F-serratus_M_contig1235:45129..45190Fucus serratus maleCDSF-serratus_M_contig1235 45130..45190 +
1690962726.1604264-CDS-F-serratus_M_contig1235:45129..451901690962726.1604264-CDS-F-serratus_M_contig1235:45129..45190Fucus serratus maleCDSF-serratus_M_contig1235 45130..45190 +
1622929153.7190402-CDS-F-serratus_M_contig1235:45458..455291622929153.7190402-CDS-F-serratus_M_contig1235:45458..45529Fucus serratus maleCDSF-serratus_M_contig1235 45459..45529 +
1690962726.1717494-CDS-F-serratus_M_contig1235:45458..455291690962726.1717494-CDS-F-serratus_M_contig1235:45458..45529Fucus serratus maleCDSF-serratus_M_contig1235 45459..45529 +
1622929153.7329125-CDS-F-serratus_M_contig1235:45898..460291622929153.7329125-CDS-F-serratus_M_contig1235:45898..46029Fucus serratus maleCDSF-serratus_M_contig1235 45899..46029 +
1690962726.1836135-CDS-F-serratus_M_contig1235:45898..460291690962726.1836135-CDS-F-serratus_M_contig1235:45898..46029Fucus serratus maleCDSF-serratus_M_contig1235 45899..46029 +
1622929153.762594-CDS-F-serratus_M_contig1235:46388..465581622929153.762594-CDS-F-serratus_M_contig1235:46388..46558Fucus serratus maleCDSF-serratus_M_contig1235 46389..46558 +
1690962726.192408-CDS-F-serratus_M_contig1235:46388..465581690962726.192408-CDS-F-serratus_M_contig1235:46388..46558Fucus serratus maleCDSF-serratus_M_contig1235 46389..46558 +
1622929153.7775779-CDS-F-serratus_M_contig1235:46816..469541622929153.7775779-CDS-F-serratus_M_contig1235:46816..46954Fucus serratus maleCDSF-serratus_M_contig1235 46817..46954 +
1690962726.2007577-CDS-F-serratus_M_contig1235:46816..469541690962726.2007577-CDS-F-serratus_M_contig1235:46816..46954Fucus serratus maleCDSF-serratus_M_contig1235 46817..46954 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1235.1772.1prot_F-serratus_M_contig1235.1772.1Fucus serratus malepolypeptideF-serratus_M_contig1235 43488..46954 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1235.1772.1

>prot_F-serratus_M_contig1235.1772.1 ID=prot_F-serratus_M_contig1235.1772.1|Name=mRNA_F-serratus_M_contig1235.1772.1|organism=Fucus serratus male|type=polypeptide|length=275bp
MASGDHSHDHDHGHDHSHGHDHGHGHPDGHKEGINIEGMNYQEHGHTHEH
MEHPGTYSDRDPPLLDRSLSERAFTVGIGGPVGSGKTALMLELCKALREE
LSIGAVTNDIFTREDAEFLTKNAALEEGRIAAIETGGCPHAAIREDISAN
LMACEMLTARHQADMILMESGGDNLAANYSRELADYIIYVIDVAGGDKVP
RKGGPGITQSDLLVINKTDLAEAVGADLEVMRRESKVMRGEGHTVFAQVK
KGVGVDEIKALILAAYEAFKTTCT*
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mRNA from alignment at F-serratus_M_contig1235:43431..47499+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1235.1772.1 ID=mRNA_F-serratus_M_contig1235.1772.1|Name=mRNA_F-serratus_M_contig1235.1772.1|organism=Fucus serratus male|type=mRNA|length=4069bp|location=Sequence derived from alignment at F-serratus_M_contig1235:43431..47499+ (Fucus serratus male)
AGCATTTCCAGCTGTAGCTGTTCAGTGCATCTGCTCTGTCTCCTAACCCT GGCAGGGATGGCTTCAGGGGACCATTCTCACGACCATGACCATGGCCACG ACCACAGTCATGGCCACGATCACGGTCACGGTCACCCAGATGGTCATAAA GAAGGAATCAATATCGAGGTAGGGCCGAAAAAAACTGATGCATATATGTA TGCATGTACTGATATGCATCTATCTATGGTCATCACATATAGCAGAGTAT GGATCAACCGGGTGAGGTTGCTAATCCTGCTCGAGGTCAACGGATCAGGG AAACTGAATATTCCCCTATCCTCGTACGCGCCTGAGAATTTGGTCTTGAG AGACGGATTCAGCCGTCCCGTCCCGGTTCACCCTGCTCGTTCTCTATACT CAGACTGAATCGGGTGCTTAACGGGATTCCTCCCCATTTCCGCGACGGCG TCCATTTAGTTATTCAAACGGACGTACCCTGTCTGGCCAGTCCCGAGGTA GTCGGGTCACGCAATTGCGTACCGATGGCGTTCACTGCCGAGATTCAGCC AGGACAGGGCCAGTACAGTTCCAGTAACGAGTGTTGCCACTTTGTAGGTC ACCTTGGACTATGACCAATTAATGTGCGCCTCTCTTTTCCAACACCCAAA AAGGCAGAACTACTACAGGTGCATGTACATTAATACCTGTACAGAGTATG TTCAGTATGTAGAGTATTTCGTAAGGGTCCGATTCTTTTTTAGATTTATC TGAAGCTCTGTTACGGAACGCACCAGCACGAAAGCTTGTTTCAGGTCAAT CTAGCTCTTGATGGTGTGGAACACTTTTTGAGTCTCGGTACTTGTGCAAC AACTTGTTCCCCCTGGCTGGGGTATGATGCATGATGGTATAATGATGCTC AGAAGGCCTATTCTAGATGCGTTCATATTTTTCTTTAAACAGCGAGCGTT TGCTTTCGCTTTGCTCAATTCTCATCAACGTACTGGTAGGGACATTTTTT TGTCTTGGTTTTTCTGCACTATCTACAGGTTAGTGTACTGCACAAGTGAT GATGGCTCCATTCAACTGGCTTGCTATTATAATATTCCCATCAAATCAAG CGTGTGGTCCTGCGGGATCTACCCCGTACCGACCTACAGTCCTCTGCCCG ATGCAAGTTCAGCACAGCTTCGCCTCCTCAACCAGAGGTTGCAGTGCGCT TTCCGCTCCAATTGTCCATTTTTTTTTTCAATATTAGTTTTAAAACATAC TATACTAGTCTAACTGTAACACGACCAGTACTGGTACCTGTACCCTTCCT CGCCTGTCGAAAGGGCATGAACTACCAAGAACATGGTCACACCCACGAGC ACATGGAACATCCAGGGACCTATTCTGACCGAGATCCGCCACTGCTGGAT CGATCCTTGTCGGAGCGCGCATTTACCGTGGGCATCGGCGGGCCCGTAGG GAGCGGGTGAGTCGGGCACAAAGGAGGTACATGGATGGTACACATAAGTT TTGTTTAAGAAGCTTTTTAGACCCGATACCGGAAAAGGTCCAGCTGCGGC CCTCCAGTTGCCCAGACTGTTTTACAAGGCGCAGGTGCCTCCTTGGATTG TTCAACTCGAAGCGACCACAGCTGCTACGACGGAGGCGTTAAACACCAAC CGTTTTTCCCTGCCTATGCCTGCGCCCGGGGGTCCGCTGCTGCCGCCAGG AAGACGGCTCTCATGTTGGAGTTGTGCAAGGCGCTTCGCGAAGAGCTGAG CATTGGAGCGGTGAGTGGACGGACCCCTGTCGTATCCTCTTTCTCCACGC ATCCCTCCTTTGCCATAGCATCGCACTACAGTACTGAAATATACTAGGGC GACCCGTCAGCAGCCCTGTAATGTAATCCACCTGGAGGCAAGAGGCTGTA CGATCCTTAGGACAGCTTAAAGGCAACGCTGACTCTGCATGGTAAAAAAG CTTTCGACACCGTCACGGAATTGATCTTGACATCTCGCCCTCAAGACATG AAGCTGACCCCTCCGCATTGGTGACCAGGTGACTAACGATATATTTACTC GAGAAGACGCCGAGTTCCTCACCAAGAATGCCGCACTGGAAGAGGGAAGG TACGATCACGTCAAATTTTCTTATTTGGGCTCGTGGGGAGAGGCAGAACG CAGGCTTGAGCCGACCGGTCGTTTCTGAGAGTCCCACTCACGAGGACTCT CTTCCACAAAAGAGCAAACCTTCCGGTGTGCTTTTGAGGGTTGGTTCCAG GAAGGTGGGTCTCCCCATGCTACAAAGTAGGGTTTTTTGCCACCGAACGC TACCTTTTGCGGGGGGAAAACTCGGGGGCGAGAAAGCTTCTCCAACATCT GGCAGGGTAATACTCGGTACGTATTGATAGTTCGCCGGTACTTTTTCGGA ATTGAGTTCTAATAAATGTCACCGATATCCGTTCGACACCAACACCCGAT CCTCGCGCGTGTGCTCAGGATTGCGGCCATCGAGACCGGGGGCTGCCCTC ACGCCGCAATCCGCGAGGACATCAGCGCCAATCTTATGGCCTGTGAAATG CTCACCGCCAGACATCAGGCGGACATGATCCTCATGGAGTCTGGAGGAGG TACGGCATCGCTATTATTAGAGAAGTGGTCGCGACCCCGCACCCCGCCTA CTAAATATATATATAATATACGCTTGTGTTTGGACTATGACGAACAACTT GCGGTGCGACGATGACCGACGGTGCGCCTCAGGTCTACTCTCTCTTAAGA AATTTTTTAGTGCGTCCTGTGAACAACATCGACCTCGGCGCACGGGAATG TCTGAAAAAAAACAGCACTACGTTACCCCCATCTGCACAGCAAGCCGGAG ATGATACCAGACCGGCTGATTTTGGTCCAACAAACATTTGAAGCGTCGCA ATATTTCTGTTGTTGCCCTCTCGCGCGCTCGACCCGTACCCCGTACCGAG TCGCGCAGATAACCTAGCGGCGAACTACAGCAGAGAGTTGGCGGACTACA TAATCTATGTCATCGACGTTGCCGGGGGAGACAAAGTTCCGAGGAAAGGA GGACCGGGTATCACACAGTCTGACCTGCTCGTGATCAACAAAACCGATCT GGCGGAGGCTGTGGGTGCAGACCTCGAGGTTTGTCTAGACTTGAATATCT TCGCGATTCCCTTTGGCCTGGTTTCCTGTTGTACCCAGCGTGTTTGCATG TGCGATCATATTGCCTTACGAAAAGTGCAACCAATGGCTGCTTTTTTCAC CTCGCGGCAGTTTCGCGGCAACAACTGTACAGAAACTAAGCGGTACTGAT TTGCAGATGGTGGCGTCGCAGCGCGTTTTTTTTACCTATGAGTGAAGGGC TTTCTGCGACGCTGACCGCGACTTATGATTGCTAAGGTGATGCGACGCGA GTCCAAGGTTATGCGCGGGGAGGGCCATACCGTCTTCGCACAGGTCAAGA AGGGAGTCGGGGTGGACGAGATCAAGGCGCTCATCCTCGCCGCCTACGAG GCGTTCAAGACAACCTGCACCTAAAGCTATCCAAGGCGCCTTTAGCCCGC CAACAGCGTTTCGCCCCCACGTTCTTACGCGCAAAACAGAGCGAACCTGA GAGTTTCTAGTTCTTGCTCGCGCCAGGGTATGTGGCGGGGGGGCTTTTAC CTATCACACTTCACAGTATTTCGTTGGAAATTTTGGCTGTTAAGTTTTCC ACGGTCGTAAATCGAACCTGTTTTAGGGCGCGTAACCGTACAGCTGGTAG GTGTAGATGTTAATAGTCACATGTTTTCAGATCACAGGCTGTAATATTCT TGTTTTATGATATGGATACAGCGAAACTTAGGGACTCAGGCTACGAATTC GAAGACGCGCTGACAGAAATATCATTTCATGTGGACGTGCGAGAGCTGCT AACATTTTGGTCCGTGGTCCTCTGACGTACTTGTACGAGTAGCTCTATGG TGGCTGTTGAAAAAGGGCTCGATGTGTTGTTTTGTACCAAAGATCTCGCG CGCCGGGTAAAAAATCGCGCACAACAACCACGGGAAGCGAGACGGTTCCA TCGCGGTACTAAGACTGAC
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Coding sequence (CDS) from alignment at F-serratus_M_contig1235:43431..47499+

>mRNA_F-serratus_M_contig1235.1772.1 ID=mRNA_F-serratus_M_contig1235.1772.1|Name=mRNA_F-serratus_M_contig1235.1772.1|organism=Fucus serratus male|type=CDS|length=1650bp|location=Sequence derived from alignment at F-serratus_M_contig1235:43431..47499+ (Fucus serratus male)
ATGGCTTCAGGGGACCATTCTCACGACCATGACCATGGCCACGACCACAG
TCATGGCCACGATCACGGTCACGGTCACCCAGATGGTCATAAAGAAGGAA
TCAATATCGAGATGGCTTCAGGGGACCATTCTCACGACCATGACCATGGC
CACGACCACAGTCATGGCCACGATCACGGTCACGGTCACCCAGATGGTCA
TAAAGAAGGAATCAATATCGAGGGCATGAACTACCAAGAACATGGTCACA
CCCACGAGCACATGGAACATCCAGGGACCTATTCTGACCGAGATCCGCCA
CTGCTGGATCGATCCTTGTCGGAGCGCGCATTTACCGTGGGCATCGGCGG
GCCCGTAGGGAGCGGGGCATGAACTACCAAGAACATGGTCACACCCACGA
GCACATGGAACATCCAGGGACCTATTCTGACCGAGATCCGCCACTGCTGG
ATCGATCCTTGTCGGAGCGCGCATTTACCGTGGGCATCGGCGGGCCCGTA
GGGAGCGGGAAGACGGCTCTCATGTTGGAGTTGTGCAAGGCGCTTCGCGA
AGAGCTGAGCATTGGAGCGGAAGACGGCTCTCATGTTGGAGTTGTGCAAG
GCGCTTCGCGAAGAGCTGAGCATTGGAGCGGTGACTAACGATATATTTAC
TCGAGAAGACGCCGAGTTCCTCACCAAGAATGCCGCACTGGAAGAGGGAA
GGTGACTAACGATATATTTACTCGAGAAGACGCCGAGTTCCTCACCAAGA
ATGCCGCACTGGAAGAGGGAAGGATTGCGGCCATCGAGACCGGGGGCTGC
CCTCACGCCGCAATCCGCGAGGACATCAGCGCCAATCTTATGGCCTGTGA
AATGCTCACCGCCAGACATCAGGCGGACATGATCCTCATGGAGTCTGGAG
GAGGATTGCGGCCATCGAGACCGGGGGCTGCCCTCACGCCGCAATCCGCG
AGGACATCAGCGCCAATCTTATGGCCTGTGAAATGCTCACCGCCAGACAT
CAGGCGGACATGATCCTCATGGAGTCTGGAGGAGATAACCTAGCGGCGAA
CTACAGCAGAGAGTTGGCGGACTACATAATCTATGTCATCGACGTTGCCG
GGGGAGACAAAGTTCCGAGGAAAGGAGGACCGGGTATCACACAGTCTGAC
CTGCTCGTGATCAACAAAACCGATCTGGCGGAGGCTGTGGGTGCAGACCT
CGAGATAACCTAGCGGCGAACTACAGCAGAGAGTTGGCGGACTACATAAT
CTATGTCATCGACGTTGCCGGGGGAGACAAAGTTCCGAGGAAAGGAGGAC
CGGGTATCACACAGTCTGACCTGCTCGTGATCAACAAAACCGATCTGGCG
GAGGCTGTGGGTGCAGACCTCGAGGTGATGCGACGCGAGTCCAAGGTTAT
GCGCGGGGAGGGCCATACCGTCTTCGCACAGGTCAAGAAGGGAGTCGGGG
TGGACGAGATCAAGGCGCTCATCCTCGCCGCCTACGAGGCGTTCAAGACA
ACCTGCACCTAAGTGATGCGACGCGAGTCCAAGGTTATGCGCGGGGAGGG
CCATACCGTCTTCGCACAGGTCAAGAAGGGAGTCGGGGTGGACGAGATCA
AGGCGCTCATCCTCGCCGCCTACGAGGCGTTCAAGACAACCTGCACCTAA
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