mRNA_F-serratus_M_contig67.17706.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig67.17706.1
Unique NamemRNA_F-serratus_M_contig67.17706.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
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BLAST of mRNA_F-serratus_M_contig67.17706.1 vs. uniprot
Match: D7G5E4_ECTSI (Similar to arginine/serine-rich splicing factor 7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5E4_ECTSI)

HSP 1 Score: 310 bits (795), Expect = 3.080e-99
Identity = 214/262 (81.68%), Postives = 219/262 (83.59%), Query Frame = 1 
Query:    1 MGDVPGTKVWVGNLGSTCEERDLRDEFSKFGELNKVWVARNPPGFAFVWFADDRDATDAVREVDGRSIGGREWRVEISHQRGRGDRGGPPGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYKVRITGLPEGMRWSELKDFVRKAGDVTYADVRGDEGVAEFSNREDMTRAVRELDDTYFADRRIRVDYDDAGSGRGRSRSPRRXXXX--PPRRGSPXXXXXXXXXXXXXXXXXXXXSRSPIRDR 780
            MGDVPGTKVWVGNLGSTCEERDLRDEFSKFGELNKVWVARNPPGFAFVWFADDRDA DAVRE+DG+SI GREWRVE+SHQRGR DRG PPGG            XXXXXXXXXXXXXXXXXXXX              YKVRITGLPEGMRWSELKDFVRKAGDVTYADVRGDEGVAEFSNR+DM+RAVRELDDTYFADRRIRVDYDD GSG      P  XXX   PPRRGS XXXXXXXXXXXXXXXXXXXXSRSPIRDR
Sbjct:    1 MGDVPGTKVWVGNLGSTCEERDLRDEFSKFGELNKVWVARNPPGFAFVWFADDRDAGDAVREIDGKSIAGREWRVEVSHQRGR-DRG-PPGG------------XXXXXXXXXXXXXXXXXXXXYGAPRVGGAAPRTGYKVRITGLPEGMRWSELKDFVRKAGDVTYADVRGDEGVAEFSNRDDMSRAVRELDDTYFADRRIRVDYDDGGSGXXXXXXPAXXXXRSPPPRRGSXXXXXXXXXXXXXXXXXXXXXSRSPIRDR 248
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BLAST of mRNA_F-serratus_M_contig67.17706.1 vs. uniprot
Match: A0A6H5L109_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L109_9PHAE)

HSP 1 Score: 221 bits (563), Expect = 8.480e-65
Identity = 151/217 (69.59%), Postives = 151/217 (69.59%), Query Frame = 1 
Query:    1 MGDVPGTKVWVGNLGSTCEERDLRDEFSKFGELNKVWVARNPPGFAFVWFADDRDATDAVREVDGRSIGGREWRVEI------------------------------------------SHQRGRGDRGGPPGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYKVRITGLPEGMRWSELKDFVRKAGDVTYADVRGDEG 525
            MGDVPGTKVWVGNLGSTCEERDLRDEFSKFGELNKVWVARNPPGFAFVWFADDRDATDAVREVDGRSI GREWRVEI                                          SHQRGR DRG PPGGG    XXXXXXXXXXXXXXXXXXXXXXXX                 YKVRITGLPEGMRWSELKDFVRKAGDVTYADVRGDEG
Sbjct:    1 MGDVPGTKVWVGNLGSTCEERDLRDEFSKFGELNKVWVARNPPGFAFVWFADDRDATDAVREVDGRSIAGREWRVEIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSHQRGR-DRG-PPGGGYGGGXXXXXXXXXXXXXXXXXXXXXXXX-----------------YKVRITGLPEGMRWSELKDFVRKAGDVTYADVRGDEG 198
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BLAST of mRNA_F-serratus_M_contig67.17706.1 vs. uniprot
Match: A0A835Z7K1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7K1_9STRA)

HSP 1 Score: 162 bits (410), Expect = 1.520e-42
Identity = 107/233 (45.92%), Postives = 132/233 (56.65%), Query Frame = 1 
Query:    1 MGD--VPGTKVWVGNLGSTCEERDLRDEFSKFGELNKVWVARNPPGFAFVWFADDRDATDAVREVDGRSIGGREWRVEISHQRGRGDRGGPPGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYKVRITGLPEGMRWSELKDFVRKAGDVTYADVRGDEGVAEFSNREDMTRAVRELDDTYFADRRIRVDYDDAGSGRGR-SRSPRRXXXXPPRRG 690
            MGD    GTKV++GN+     E +LRDEF+++G L +VW+ARNPPGFAFVWF+D RDA DAVR +DG  + G+  RVEISH R RG R      G             XXXXX                           +KVRI+ LP    W+ELKDF+RK GD+ YA+    EGVAEF++R+ M RA REL DT F DRRI ++ +D      R SRSP      PPRRG
Sbjct:    1 MGDREESGTKVFIGNVEG-ISEGELRDEFARYGRLTQVWIARNPPGFAFVWFSDIRDAEDAVRGLDGSQLNGKPIRVEISHNR-RGRRXXXXXXGRGGGYGDRDRGYDXXXXXSSRPPPRAGGAPRKTG-----------FKVRISNLPANAHWTELKDFMRKVGDIIYANAENGEGVAEFADRDGMERAYRELHDTTFGDRRIVIEMNDESDRYRRDSRSP------PPRRG 214
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BLAST of mRNA_F-serratus_M_contig67.17706.1 vs. uniprot
Match: A0A5D6YQ52_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YQ52_9STRA)

HSP 1 Score: 139 bits (351), Expect = 5.750e-34
Identity = 92/219 (42.01%), Postives = 119/219 (54.34%), Query Frame = 1 
Query:   16 GTKVWVGNLGSTCEERDLRDEFSKFGELNKVWVARNPPGFAFVWFADDRDATDAVREVDGRSIGGREWRVEISHQRGRGDRGGPPGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYKVRITGLPEGMRWSELKDFVRKAGDVTYADVRGD-EGVAEFSNREDMTRAVRELDDTYFADRRIRVDYDDAGSGRG----RSRSP 657
            GT+V+VG L      R+++D FS++G ++ +WVARNPPGFAFV F D RDA DA+R +DGR   G   RVEI+    R D GG   GG   XXXXXXXX                                  ++VRIT LP G  W  +KDF+R  G+VTY D+  D   VAEF ++EDM  A+++LDDT F    +R+  +  G G      RSRSP
Sbjct:    2 GTRVYVGGLPRDATSREIQDGFSRYGHVSNIWVARNPPGFAFVDFEDPRDAEDAIRALDGRDFLGGRIRVEIARGGSRRDDGGRGRGGDFGXXXXXXXXRDRGFDRGAGRNPPQRTD----------------FRVRITDLPRGTDWRNIKDFLRTGGEVTYCDIENDGTAVAEFQSKEDMDNAIKKLDDTEFRGNYVRLIPESGGGGNDSSSRRSRSP 204
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BLAST of mRNA_F-serratus_M_contig67.17706.1 vs. uniprot
Match: A0A6G0XSF8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XSF8_9STRA)

HSP 1 Score: 131 bits (330), Expect = 1.100e-31
Identity = 75/214 (35.05%), Postives = 113/214 (52.80%), Query Frame = 1 
Query:   22 KVWVGNLGSTCEERDLRDEFSKFGELNKVWVARNPPGFAFVWFADDRDATDAVREVDGRSIGGREWRVEISHQRGRGDRGGPPGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYKVRITGLPEGMRWSELKDFVRKAGDVTYADVRGDEGVAEFSNREDMTRAVRELDDTYFADRRIRVDYDDAGSGRGRSRSPRR 663
            +V+VG +  +   R++ + F +FG++  VW+ARNPPGFAFV F D RDA DA++++DG+ + G   RV+++       RGG   GG                                             +KVRITGLP    W ++KDFVRKAGDV++ D+ GD+ + E +++ D+   +R+LDDT F  RR+ +      + R RS+SPRR
Sbjct:    5 RVYVGGIPKSAGNREIEEAFQRFGKIVNVWIARNPPGFAFVDFEDPRDADDAIKDMDGKELLGERIRVQMA-------RGGVRRGGRGDRDRSYRDGSSDRHRSSG-------------------------HKVRITGLPRNADWRDVKDFVRKAGDVSFCDMDGDDAIVELASKFDLENVIRKLDDTEFDGRRVSIK-----AVRDRSQSPRR 181
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BLAST of mRNA_F-serratus_M_contig67.17706.1 vs. uniprot
Match: A0A2D4BLB0_PYTIN (Serine/arginine-rich splicing factor 1-like protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BLB0_PYTIN)

HSP 1 Score: 127 bits (319), Expect = 6.870e-30
Identity = 81/203 (39.90%), Postives = 111/203 (54.68%), Query Frame = 1 
Query:   16 GTKVWVGNLGSTCEERDLRDEFSKFGELNKVWVARNPPGFAFVWFADDRDATDAVREVDGRSIGGREWRVEISH---QRGRGDRGGPPGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYKVRITGLPEGMRWSELKDFVRKAGDVTYADVRGD-EGVAEFSNREDMTRAVRELDDTYFADRRIRV 612
            GT+V+VG L     +R+++D F ++G ++ VW+ARNPPGFAFV F D RDA DA+R +DGR   G   RVE +    +R RGDRG                               XXXXXXX             ++VRIT LP G+ W ++KD +R AG+VT+ +V GD   +AEF  +EDM  A+++LDD  F    IR+
Sbjct:    2 GTRVYVGGLPRDATQREIQDGFGRYGHISNVWIARNPPGFAFVDFEDPRDADDAIRSMDGRDFLGGRIRVEQARGGTRRDRGDRG-----------------------------DFXXXXXXXRNERGRNPPQRTDFRVRITDLPRGVDWRDVKDHLRTAGEVTFCNVEGDGTAIAEFQTQEDMDNAIQKLDDKDFRGSYIRI 175
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BLAST of mRNA_F-serratus_M_contig67.17706.1 vs. uniprot
Match: A0A484E7I0_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E7I0_BRELC)

HSP 1 Score: 130 bits (326), Expect = 6.890e-30
Identity = 78/217 (35.94%), Postives = 109/217 (50.23%), Query Frame = 1 
Query:   16 GTKVWVGNLGSTCEERDLRDEFSKFGELNKVWVARNPPGFAFVWFADDRDATDAVREVDGRSIGGREWRVEISHQRGRGDRGGPPGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYKVRITGLPEGMRWSELKDFVRKAGDVTYADVRGD-EGVAEFSNREDMTRAVRELDDTYFADRRIRVDYDDAGSGRGRSRSPRR 663
            GT+V+VG L      R+++D F+++G ++ +WVARNPPGFAFV F D RDA DA+R +DGR   G   RVE++    R D GG  G                                               ++VR+T LP  + W  +KDF+R  G+VTY ++  D   +AEF  ++DM  AV++LDDT F    +RV  +  G    RSRSP R
Sbjct:   90 GTRVYVGGLPRDATSREIQDGFNRYGHVSNIWVARNPPGFAFVDFEDPRDADDAIRSMDGREFLGGRIRVELARGGSRRDGGGRRG---------------------DDERFGRGGSGGDRVERGRNPPQRTDFRVRVTDLPRDVDWRNVKDFLRTGGEVTYCNIEADGSAIAEFQTKDDMEDAVKKLDDTEFRGSYVRVAPE--GDSSRRSRSPAR 283
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BLAST of mRNA_F-serratus_M_contig67.17706.1 vs. uniprot
Match: G4YPP5_PHYSP (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YPP5_PHYSP)

HSP 1 Score: 124 bits (312), Expect = 1.380e-29
Identity = 72/193 (37.31%), Postives = 101/193 (52.33%), Query Frame = 1 
Query:   16 GTKVWVGNLGSTCEERDLRDEFSKFGELNKVWVARNPPGFAFVWFADDRDATDAVREVDGRSIGGREWRVEISHQRGRGDRGGPPGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYKVRITGLPEGMRWSELKDFVRKAGDVTYADVRGD-EGVAEFSNREDMTRAVRELDDTYF 591
            GT+V+VG L      R+++D F+++G ++ +WVARNPPGFAFV F D RDA DA+R +DGR   G   RVE++    R D GG                      XXXX                        Y+VR+T LP  + W  +KDF+R  G+VTY ++  D   +AEF  ++DM  A+++LDDT F
Sbjct:    2 GTRVYVGGLPRDATSREIQDGFNRYGHVSNIWVARNPPGFAFVDFEDPRDADDAIRSMDGRDFLGGRIRVELARGGSRRDGGG---------------------RXXXXDRGGYGGRGGDRFDRGRNPPQRTDYRVRVTDLPRDVDWRNVKDFLRTGGEVTYCNIEADGSAIAEFQTKDDMEDAIKKLDDTEF 173
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BLAST of mRNA_F-serratus_M_contig67.17706.1 vs. uniprot
Match: A0A8K1CTI4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CTI4_PYTOL)

HSP 1 Score: 126 bits (316), Expect = 1.930e-29
Identity = 86/217 (39.63%), Postives = 118/217 (54.38%), Query Frame = 1 
Query:   16 GTKVWVGNLGSTCEERDLRDEFSKFGELNKVWVARNPPGFAFVWFADDRDATDAVREVDGRSIGGREWRVEISHQRGRGDRGGPPGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYKVRITGLPEGMRWSELKDFVRKAGDVTYADVRGD-EGVAEFSNREDMTRAVRELDDTYFADRRIRVDYDDAGSGRGRSRSPRR 663
            GT+V++G L      R+++D FS++G +  +W+ARNPPGFAFV F D RDA DA+R +DGR   G   RVE++    R DR                        XXXXXXXXXX                  ++VRIT LP G+ W ++KD +R AG+VT+ +V  D   +AEF +R+D+  A+ +LDD  F    IR+    +   R RSRSPRR
Sbjct:    2 GTRVYIGGLPRDATSREVQDGFSRYGHIANIWIARNPPGFAFVDFEDPRDADDAIRSMDGRDFLGGRIRVELAKGGSRRDR------------------------XXXXXXXXXXRGGDRFERGGRNPPQRTEFRVRITDLPRGVDWRDVKDHLRTAGEVTFCNVENDGTAIAEFQSRDDVQNAIEKLDDKEFRGSYIRITAA-SSEERSRSRSPRR 193
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BLAST of mRNA_F-serratus_M_contig67.17706.1 vs. uniprot
Match: A0A7S3PMS3_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PMS3_9STRA)

HSP 1 Score: 127 bits (319), Expect = 2.650e-29
Identity = 110/210 (52.38%), Postives = 139/210 (66.19%), Query Frame = 1 
Query:   19 TKVWVGNLGSTCEERDLRDEFSKFGELNKVWVARNPPGFAFVWFADDRDATDAVREVDGRSIGGREWRVEISHQRGRGDRGGPPGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYKVRITGLPEGMRWSELKDFVRKAGDVTYADVRGDEGVAEFSNREDMTRAVRELDDTYFADRRIRVDYDDAGSGRGRS 648
            +K++VGN+     E +L D+F K+G+++ VW+ARNPPGFAFV F D RDA DA+++++ R   GR  RVE+S +R            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX            ++V ITGLP    W +LKDF+R+ G+V YADVR  EGVA+F   +DM RAVR+LD T F    I +  +D G  R RS
Sbjct:    2 SKLYVGNIPDDTREGELEDKFKKYGKISSVWLARNPPGFAFVTFDDPRDAEDAMKDMNDREFLGRRIRVELSKERRX---------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRHGRHRDYRQGEFRVIITGLPSRCSWQDLKDFLRRGGEVCYADVRDGEGVADFLTADDMDRAVRKLDGTDFDGGPITI-KEDRGGRRDRS 201
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig67.17706.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G5E4_ECTSI3.080e-9981.68Similar to arginine/serine-rich splicing factor 7 ... [more]
A0A6H5L109_9PHAE8.480e-6569.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z7K1_9STRA1.520e-4245.92Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A5D6YQ52_9STRA5.750e-3442.01Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A6G0XSF8_9STRA1.100e-3135.05Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A2D4BLB0_PYTIN6.870e-3039.90Serine/arginine-rich splicing factor 1-like protei... [more]
A0A484E7I0_BRELC6.890e-3035.94Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
G4YPP5_PHYSP1.380e-2937.31Uncharacterized protein (Fragment) n=1 Tax=Phytoph... [more]
A0A8K1CTI4_PYTOL1.930e-2939.63Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S3PMS3_9STRA2.650e-2952.38Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig67contigF-serratus_M_contig67:50032..55583 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score313.2
Seed ortholog evalue1.2e-82
Seed eggNOG ortholog2880.D7G5E4
Preferred nameNPL3
KEGG koko:K12893,ko:K12896,ko:K14651
KEGG Pathwayko03022,ko03040,ko05168,ko05202,map03022,map03040,map05168,map05202
Hectar predicted targeting categoryother localisation
GOsGO:0000122,GO:0000375,GO:0000377,GO:0000398,GO:0000993,GO:0001067,GO:0001069,GO:0001098,GO:0001099,GO:0003674,GO:0003676,GO:0003723,GO:0003727,GO:0003729,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0006139,GO:0006355,GO:0006357,GO:0006396,GO:0006397,GO:0006403,GO:0006405,GO:0006406,GO:0006412,GO:0006415,GO:0006417,GO:0006518,GO:0006611,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0008104,GO:0008143,GO:0008150,GO:0008152,GO:0008380,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010494,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010629,GO:0015031,GO:0015833,GO:0015931,GO:0016043,GO:0016070,GO:0016071,GO:0017148,GO:0019219,GO:0019222,GO:0019538,GO:0019899,GO:0022411,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031369,GO:0031370,GO:0031503,GO:0031554,GO:0032268,GO:0032269,GO:0032784,GO:0032786,GO:0032968,GO:0032984,GO:0032991,GO:0033036,GO:0034243,GO:0034248,GO:0034249,GO:0034613,GO:0034641,GO:0034645,GO:0035770,GO:0036464,GO:0042886,GO:0043043,GO:0043170,GO:0043175,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043242,GO:0043244,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0045184,GO:0045292,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0045944,GO:0046483,GO:0046907,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050657,GO:0050658,GO:0050789,GO:0050794,GO:0051028,GO:0051128,GO:0051129,GO:0051168,GO:0051169,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051234,GO:0051236,GO:0051246,GO:0051248,GO:0051252,GO:0051253,GO:0051254,GO:0051641,GO:0051649,GO:0060255,GO:0060567,GO:0065007,GO:0070063,GO:0070717,GO:0070727,GO:0071166,GO:0071426,GO:0071427,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1904594,GO:1990904,GO:2000112,GO:2000113,GO:2000804,GO:2000805,GO:2001141
EggNOG free text desc.RNA splicing
EggNOG OGsCOG0724@1,KOG0106@2759
Ec32 ortholog descriptionSR RNA splicing protein
Ec32 orthologEc-06_010740.1
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03019,ko03021,ko03041
Exons6
Model size1738
Cds size783
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932052.014693-UTR-F-serratus_M_contig67:50031..509691622932052.014693-UTR-F-serratus_M_contig67:50031..50969Fucus serratus maleUTRF-serratus_M_contig67 50032..50969 -
1690964121.539027-UTR-F-serratus_M_contig67:50031..509691690964121.539027-UTR-F-serratus_M_contig67:50031..50969Fucus serratus maleUTRF-serratus_M_contig67 50032..50969 -
1622932052.0380864-UTR-F-serratus_M_contig67:51503..515201622932052.0380864-UTR-F-serratus_M_contig67:51503..51520Fucus serratus maleUTRF-serratus_M_contig67 51504..51520 -
1690964121.550629-UTR-F-serratus_M_contig67:51503..515201690964121.550629-UTR-F-serratus_M_contig67:51503..51520Fucus serratus maleUTRF-serratus_M_contig67 51504..51520 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932052.0578327-CDS-F-serratus_M_contig67:51520..516851622932052.0578327-CDS-F-serratus_M_contig67:51520..51685Fucus serratus maleCDSF-serratus_M_contig67 51521..51685 -
1690964121.5599153-CDS-F-serratus_M_contig67:51520..516851690964121.5599153-CDS-F-serratus_M_contig67:51520..51685Fucus serratus maleCDSF-serratus_M_contig67 51521..51685 -
1622932052.0724208-CDS-F-serratus_M_contig67:51940..520341622932052.0724208-CDS-F-serratus_M_contig67:51940..52034Fucus serratus maleCDSF-serratus_M_contig67 51941..52034 -
1690964121.569898-CDS-F-serratus_M_contig67:51940..520341690964121.569898-CDS-F-serratus_M_contig67:51940..52034Fucus serratus maleCDSF-serratus_M_contig67 51941..52034 -
1622932052.0936282-CDS-F-serratus_M_contig67:53738..540311622932052.0936282-CDS-F-serratus_M_contig67:53738..54031Fucus serratus maleCDSF-serratus_M_contig67 53739..54031 -
1690964121.580944-CDS-F-serratus_M_contig67:53738..540311690964121.580944-CDS-F-serratus_M_contig67:53738..54031Fucus serratus maleCDSF-serratus_M_contig67 53739..54031 -
1622932052.110799-CDS-F-serratus_M_contig67:54735..548611622932052.110799-CDS-F-serratus_M_contig67:54735..54861Fucus serratus maleCDSF-serratus_M_contig67 54736..54861 -
1690964121.596651-CDS-F-serratus_M_contig67:54735..548611690964121.596651-CDS-F-serratus_M_contig67:54735..54861Fucus serratus maleCDSF-serratus_M_contig67 54736..54861 -
1622932052.1319935-CDS-F-serratus_M_contig67:55478..555831622932052.1319935-CDS-F-serratus_M_contig67:55478..55583Fucus serratus maleCDSF-serratus_M_contig67 55479..55583 -
1690964121.6134415-CDS-F-serratus_M_contig67:55478..555831690964121.6134415-CDS-F-serratus_M_contig67:55478..55583Fucus serratus maleCDSF-serratus_M_contig67 55479..55583 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig67.17706.1prot_F-serratus_M_contig67.17706.1Fucus serratus malepolypeptideF-serratus_M_contig67 51521..55583 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig67.17706.1

>prot_F-serratus_M_contig67.17706.1 ID=prot_F-serratus_M_contig67.17706.1|Name=mRNA_F-serratus_M_contig67.17706.1|organism=Fucus serratus male|type=polypeptide|length=261bp
MGDVPGTKVWVGNLGSTCEERDLRDEFSKFGELNKVWVARNPPGFAFVWF
ADDRDATDAVREVDGRSIGGREWRVEISHQRGRGDRGGPPGGGGGYGGGG
GGYGGGGGGGYGGGGGYGGGGGGYGGGPRMGGAAPRTGYKVRITGLPEGM
RWSELKDFVRKAGDVTYADVRGDEGVAEFSNREDMTRAVRELDDTYFADR
RIRVDYDDAGSGRGRSRSPRRRSRSPPRRGSPPRGRSRSPPGRGRSPYGR
SRSRSPIRDR*
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mRNA from alignment at F-serratus_M_contig67:50032..55583-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig67.17706.1 ID=mRNA_F-serratus_M_contig67.17706.1|Name=mRNA_F-serratus_M_contig67.17706.1|organism=Fucus serratus male|type=mRNA|length=5552bp|location=Sequence derived from alignment at F-serratus_M_contig67:50032..55583- (Fucus serratus male)
ATGGGAGACGTGCCTGGAACGAAGGTTTGGGTGGGTAACCTCGGAAGCAC
CTGCGAGGAGCGCGATCTTAGGGACGAGTTTAGCAAGTTCGGAGAGCTTA
ACAAGGTGTGAGGCCCCAAGCCTGTGAACTTTTTCGAGTTCCCTGGTGCG
GTAAAGAAGTCTTGTTTCTCTCTAGATTTACAATCCCGTTGTGTCGAGAA
CCCGAGCGACCGCAACGAGCGGTTATATAACAAACATTACTGCCATCGTA
ATTTGTCCACATTGGTTGGTTGTCGGCCATCTCGGTTTACCCAAGCTTTT
ATCCGACGACAGCCCTTACCCCTTCCGTCACCGAGAACCCTTCGCTTTGC
CGCCCTTTTGAGACGAGATACCATTTCTACCCCTCCCCGCTGCAACCGCT
CCAATTCTCCGGCCAGTAATGTTTTCCCATCCTACCCTTCTGCTGCAGGT
TCCCGCACAACTGATCCAACCAGTTGCCTCGTTCCCCTTTTCTCTCTTGC
GTCATTGTTCGGTCCGATTACTATACCTGGTTGCTTTTTCGCACTTGTCC
TTTCATCACTTTTTTGCATGTTCCCGCTATTTTTTGCTCTGTCGTACACG
TTGACCTTTAAACTCATAATAATAGGAAACTATACTGACTTTATGTTTCT
TCGTTGTTGCCCTTTTTTTGTTTTTTTTCCCCCCACTCCTCGTATCTCTT
GCTTTTTCCTCGCCTTGAACAGGTCTGGGTCGCTCGCAACCCACCGGGAT
TCGCGTTCGTCTGGTTCGCCGATGATCGCGATGCTACGGATGCTGTGAGG
GAGGTAGACGGTAGAAGCATCGGGGGCCGTGAGTGGCGCGTTGAGATTGT
GAGTACGCAGGGGTCAAGCCATCGTCGGGACACTTGAAACCCTGTAGAGG
CTCTGTAATGTACCTGTACTCCTTCCTACATGTGAAGCTTGAATATACCC
ATATAATATTGTACCAGCTGTACTCGTAAAACTGAAGCTTGTATGAAAAA
ACTCCGGTACGAAGTGTGATACATCTACGGATATTGATGTTGTTAACACC
AGTGCACAGCTAGCCTTGTGTTGACACGAAGGGAGCCTTATCCAAAGACC
TCCTGTACGTTGATGCCTATTAATATAATCACCGACCTCATCGATTTATT
GTTACTCTCAGAACTTATGTATTCTATACAATCACAGGGTTGTCAATTTT
ATTTAAAAAACTTGACAACTGACCATAAACTCGGTGGTCCCACGTTTCCT
TGACAAAAAATAAAGAAAAATATTCCCATTATTCTGCCGAGACCATTCTC
GGATCTGTTGCTCGAATGTTTTTTTTGGGGCTTCTCTCATATAGTTTTAT
ACTGAAACTACAAATTTAGGAGCTTTGGCTTTGCTACCGAAAAATCTCAC
GTCTCCGTTTATGTCTTTGGGTTTGGTTTGGTTTGTAGAATCTCAACGTT
GTTCCAATTTGGCGCGGCATCCTGCACTCTAACGTCATTTGGTACAAAAT
CTCATGTATTTTTTCGCTTTAATTCGCTTGCTCCCATCCTCTCGACAATC
AGTCTCATCAGAGGGGACGAGGTGACCGTGGTGGCCCCCCTGGCGGCGGA
GGTGGTTATGGTGGTGGAGGAGGCGGTTACGGTGGCGGAGGCGGAGGCGG
CTATGGTGGTGGAGGAGGTTACGGGGGTGGAGGAGGGGGTTACGGGGGCG
GCCCGCGCATGGGTGGTGCTGCTCCTCGCACTGGCTATAAGGTTCGAATC
ACTGGGCTTCCAGAAGGCATGCGGTGGTCAGAGCTTAAGGACTTCGTGCG
CAAGGCGGGAGACGTGACTTACGCCGACGTGCGCGGCGACGAAGGGTAAG
TTTGGCAGTATCCAGTCAAATCATCACGGGATACAATTCGCCTCAATACT
TCGATTTTGTGGCTGATATCCCCCGGAGTGTTTGTGTCCGTTTTCCCTGT
CTCGCCGCCTAAAGAGGTGATATCCTCGATCCCAAGCGTTGTAACCCTAT
TTTGGCCAAACGCTGGTTCATCATCGATTGCTCAACCGTGTTCCCACCAT
TGCCATTTGGGACTTGGCGACGTCGAATGCGACGCATGGCGTGTTGGGAA
GTGTACAGCTGCAAAAAGCAACTGGCTATAACATTAAACCCCTTTTCCCT
CTGGATGAGCCCCCCCCCCCTCCCCCGGTTGTACCTGTCTTCAACGGTGA
GTCGAGGGAGAAAGAAAGGCCTGGGGTGACTCATGTTGATTCTGCGTCCC
TCAGGCAGAACTTCGTCCCTTGAGCAGAATCTCGAATCGATAGAAGGCTA
GTAATGGCGCGATCGTGCCTTCGCGAGAGCTTTCCGCACAGATGAAATCG
CCGGAAAATGAGATGAAATCATTTTAACGACTCTAACGTCGTCGACCGGT
GTTCAGTGGGAATTAAAGGTCAACGAAACCTCAAAACCGCGATTTGACCG
CCGTAGGTATCATGTCCTAAGAACTTGGAATTTCTCTTTTAGAGTTTGAA
TTGGCTAATGTACACATCGAAATCGGTGGGAGGGGGGGTGGGGATCGCGC
AATCCCACCAACCACCAGTATTGCGTGGAACCCCTTTTAGGATAGGGACG
GGTTCATCGGAGAACTTCTTGAAGGCGGCCACCTTTCTTTAGAGATCTTT
CGGCATTGGGAGAGGAGTTACAAGCCTTCTTGCTCCCTCCCTCCCATCTA
AGAGCCGATCGACAGCAGTTGTGTAGCGGCAGCTTGGAGTGAATCTTGGT
TCAAGTACCGCGGATGACTTCTCTTCTTGGCCGCGTTTTCCATCAACCAC
CACATTGCGAGCACCGAGCCCAGAAGCAGCATCACTGCTCTTCCCTTCAT
ACGTCAGTAGAGCATCAGAACCCAGCTACAACAGCCACACCACCTACACC
TACTGCGCCGAATGGTTTCGATCGGCAACCATCGCAACCATCGCAACCCC
AACATTTCAACACTTCAACACCGTCGACGACCGCTACAAGCTGCAATCTT
CGGTTTCAACCGTTCGTGACGTGACGTTGCTGCCCTGCCAACTACTGGAT
GAAACGGTACCGTAACCACGCGTATTTCGAATTTGTCAAATAAAAGTAGG
CGTCGTACAAATCGGCACTTTTGCGGGATAACCCCCGAATTTACGCCTCA
AAAGGATCGTAGGCACCCTGCAGACAAACGCGTTGTTCTTTTAACAGTAC
GTAGAAGGGAACAACGGGGTCCACGCGAGAGTTGTCTAATATTGGAAACA
TCGGGGAAGCAGCTTCGGCATCGGAAGCCAAGCAAGCACTAGCGTGGCCC
CTACATTGAAAAAACATTCGGGCCTTGTTGTGCGGATCCGCCGTCACGAC
AAGCCCGTGGTGTTTTGCCCCGCCTGTCGCTTACAAGATGCTTCGACCGT
TTTTTTCTTCCTGTGTCGCCATGCTTGGGCGGGCGACCCTCGTGCGTCCA
TCGGCTCTCTCGTTTTGTGTTTTTCTCTTCCGTTCCTGTTGTATCGTGTA
ATGGTTACTGCTTGGCCACACCGCCAAAATGGTATTGTGTGGTCTACAGC
GTAGCGGAGTTCTCCAACAGGGAAGACATGACTAGGGCCGTGAGAGAGCT
CGATGACACCTACTTCGCAGACAGGCGCATCCGTGTCGACTACGTGAGTG
GCTGAACAAAATATGATTCCTCAGGCTAAAGTCTAACAGCGAGGGGGGTA
AAACGCCTCCATATGTTTTCCGCTGGTGATGTGTGTGTACAGTACTGTTG
TCTTCTGCTTGGAGGTGGTTTCAAGTTGGAAGGAAGCCCATGCCTAGACC
TTCTCTGAGCGTTGTAATCAACCTTTTAAGAACGCATGAATTCCTGCCCC
ATGCTGCGTTATTTTTATGTTCCCCCCCCCCTTTTCGTTAATATGCAGGA
TGACGCCGGCAGCGGTCGGGGCCGCTCTCGCTCCCCCAGGCGCCGCTCGC
GCAGCCCCCCCCGCCGTGGCAGCCCTCCCCGTGGACGCTCGAGGTCGCCC
CCTGGCCGCGGGCGATCCCCTTACGGGCGGAGCCGCAGTCGCAGCCCCAT
CCGTGACAGGTGAAGCCGCTCTGGAAAAACGTTGAGTGATGGCTGCAGTG
TTGTCTCTTGAGAATCTATGTTGTATCTCACTTACTATTAGTATGGCCGA
TGAGCCTCAACGTGCTAGGCTACGAATCTCACCAACTGCAACGTTGCCAT
CCTGCCCGTGGTCCTTAAGAATTTTCCCATCTCTGCCCGGTTCTTGCCTC
AAGACTTTAGTTTATTATCGCGATTCAAGTTCTTGCAATTCGTCAAGCAA
TAGTTATTTTTTACTCACGCTTTCCGCTATGAAACAAATAAGACGTATCC
TGGTTTTCCACGAGAATCAAACTTGCGATTTCCACGCTAGCAGGGTGTAC
GTGGTCACCTACTAGACCACTCGTGCGGCAAAGGTAACTTGTTTCAGAAC
TCACCCAGACTGAAATTACTCGGCAGCTTTTGGGAGATGTGCTTGGCAAC
AATGGCTTGGAGTTACAAGCTTAGCGTCCCTTGTTGTTGGATAACCTAAT
ACTTACCATTTACTGTCTCCGTCTCGGTCTGTCCGCACGCTTACGTGTAT
TTTTTTCTCTTTAGGTACTGAAACGGTTGCTGGAGGTCCAAGATCTTTGC
AGAGCCGCTCTGAAATCATGGCCACAGCAAATTCTAATATCTTTCTCCAA
AAAAAGTCGATTCGTGTCATTTCCGAGTTCGGTCGGTTTGCACACGGGGT
TAATGCGAGGAGGAGCAATCAGGCCTTGGCGAAAAAATTTCTCTTCAGTG
ACTTGTGTTTCGCGTAGAGGCCACCAAACTGCAGAATTGGGATACTCTCG
AGTACGTGATAACCCATGTGAAGGTATAGTAATGCCGCCCCTTTGCACAG
CGCGACTTCGCCTAGTGGAGTGGGAATCACCTTTGCTGCCATCACTCTAG
CCTGGTGGTGAAATATATGAGATCATTTCGCAAGGGGTTGCTTGGTTTGA
AGCACATTTATTTTTGCTGTTTCACTCAATGCCACCTGCAGTCGTACTGG
ATGCAAAACCTTTTTCTTGACCGTCTTCTGTTTTTTTGGATCCTGCGATT
GCGTCGTGGCATGGGGAGGCGCTTTGCTTTGTATGTCTTGATTTTTTGCA
TTCTCCCTTTGCCGCGCTTATATTTCGTATATAGAGTCGTTGTGGGCTGA
CACTATCTGGGTGAAGATTTTCCGATGGAAAGGAATTTTCTTAAATATCC
AATGAATGTTCACAAGTTATTTGTATAAAAAGAGGCGCACATCAAATGGT
CAAAGGTGATGCAAAGGCAACATCCGTTATTGTAATGGAAGTACACGCCA
TCGGTACGCGATTGCATGACCTGATAAACTGGAGCGTGATCAAATGGTGT
ATGGCGGTTAAAATTAATAGATGGACGCCGCCGCGGGACGGGACTGCCGA
ACCCGTTTCGTGAGGCCAAAATGTCTGGAGGCGCGAACCGGGACAAGGAA
AAAATCATTCAGCGCACCACAAGCAGGATTGACACCCGTTTCTTATTCTT
GC
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Coding sequence (CDS) from alignment at F-serratus_M_contig67:50032..55583-

>mRNA_F-serratus_M_contig67.17706.1 ID=mRNA_F-serratus_M_contig67.17706.1|Name=mRNA_F-serratus_M_contig67.17706.1|organism=Fucus serratus male|type=CDS|length=1566bp|location=Sequence derived from alignment at F-serratus_M_contig67:50032..55583- (Fucus serratus male)
ATGGGAGACGTGCCTGGAACGAAGGTTTGGGTGGGTAACCTCGGAAGCAC
CTGCGAGGAGCGCGATCTTAGGGACGAGTTTAGCAAGTTCGGAGAGCTTA
ACAAGATGGGAGACGTGCCTGGAACGAAGGTTTGGGTGGGTAACCTCGGA
AGCACCTGCGAGGAGCGCGATCTTAGGGACGAGTTTAGCAAGTTCGGAGA
GCTTAACAAGGTCTGGGTCGCTCGCAACCCACCGGGATTCGCGTTCGTCT
GGTTCGCCGATGATCGCGATGCTACGGATGCTGTGAGGGAGGTAGACGGT
AGAAGCATCGGGGGCCGTGAGTGGCGCGTTGAGATTGTCTGGGTCGCTCG
CAACCCACCGGGATTCGCGTTCGTCTGGTTCGCCGATGATCGCGATGCTA
CGGATGCTGTGAGGGAGGTAGACGGTAGAAGCATCGGGGGCCGTGAGTGG
CGCGTTGAGATTTCTCATCAGAGGGGACGAGGTGACCGTGGTGGCCCCCC
TGGCGGCGGAGGTGGTTATGGTGGTGGAGGAGGCGGTTACGGTGGCGGAG
GCGGAGGCGGCTATGGTGGTGGAGGAGGTTACGGGGGTGGAGGAGGGGGT
TACGGGGGCGGCCCGCGCATGGGTGGTGCTGCTCCTCGCACTGGCTATAA
GGTTCGAATCACTGGGCTTCCAGAAGGCATGCGGTGGTCAGAGCTTAAGG
ACTTCGTGCGCAAGGCGGGAGACGTGACTTACGCCGACGTGCGCGGCGAC
GAAGGTCTCATCAGAGGGGACGAGGTGACCGTGGTGGCCCCCCTGGCGGC
GGAGGTGGTTATGGTGGTGGAGGAGGCGGTTACGGTGGCGGAGGCGGAGG
CGGCTATGGTGGTGGAGGAGGTTACGGGGGTGGAGGAGGGGGTTACGGGG
GCGGCCCGCGCATGGGTGGTGCTGCTCCTCGCACTGGCTATAAGGTTCGA
ATCACTGGGCTTCCAGAAGGCATGCGGTGGTCAGAGCTTAAGGACTTCGT
GCGCAAGGCGGGAGACGTGACTTACGCCGACGTGCGCGGCGACGAAGGCG
TAGCGGAGTTCTCCAACAGGGAAGACATGACTAGGGCCGTGAGAGAGCTC
GATGACACCTACTTCGCAGACAGGCGCATCCGTGTCGACTACCGTAGCGG
AGTTCTCCAACAGGGAAGACATGACTAGGGCCGTGAGAGAGCTCGATGAC
ACCTACTTCGCAGACAGGCGCATCCGTGTCGACTACGATGACGCCGGCAG
CGGTCGGGGCCGCTCTCGCTCCCCCAGGCGCCGCTCGCGCAGCCCCCCCC
GCCGTGGCAGCCCTCCCCGTGGACGCTCGAGGTCGCCCCCTGGCCGCGGG
CGATCCCCTTACGGGCGGAGCCGCAGTCGCAGCCCCATCCGTGACAGGTG
AGATGACGCCGGCAGCGGTCGGGGCCGCTCTCGCTCCCCCAGGCGCCGCT
CGCGCAGCCCCCCCCGCCGTGGCAGCCCTCCCCGTGGACGCTCGAGGTCG
CCCCCTGGCCGCGGGCGATCCCCTTACGGGCGGAGCCGCAGTCGCAGCCC
CATCCGTGACAGGTGA
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