mRNA_F-serratus_M_contig656.17531.1 (mRNA) Fucus serratus male
|
Overview
Homology
BLAST of mRNA_F-serratus_M_contig656.17531.1 vs. uniprot
Match: D8LMR3_ECTSI (Oxidoreductase, short chain dehydrogenase/reductase family n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMR3_ECTSI) HSP 1 Score: 414 bits (1063), Expect = 9.010e-139 Identity = 220/318 (69.18%), Postives = 247/318 (77.67%), Query Frame = 3
Query: 18 MNSRIGTLRCLVIV-PALCKAFLSTTRSFNPRPLFMAASSTMSGTS-LKDKVFLVTGSTDGIGRHTASRLAENGATVLVHGRREASVRKAVDFVKDNGSAVSKVKGFVADVSSLRGMNQLCDEVLEKTDRLDCLINNAGVFEADFRHSEDGNEYTFAVNVLAPYVITGRLLSLIARAPDGGRVVNVASLSASYSVDFDNLQFEKGDYSDHASYSLSKLLDIMFNAELARRAPDGVKCNSLDPGTVNTKMLRAGWGMCGIPIKSANDEFYLATSDGIKGTTGKYFVSRKVYNPPPPAKDNAACRRLWAALEKLSGLSYA 965
M S G + V+V P LC AFL T RS + + + + T L DKV+LVTGSTDGIG+HTASRLAE GATVLVHGRRE++VR+AV+ V G KV+G VAD+SSLRG N LCDEVL TDRLDCL+NNAGVFEADFRHS+DG EYTFAVNVLAPYVITGRLL L+A+AP GGRVVNVASLSASYS+DFDNLQFEKG YSDHASYSLSKLLDIMFNAELARRAP G+ CNSLDPGTVNTKMLRAGWGM GIP+KSAND+FYLATSD + ++G+Y ACRRLW LE+LSG SYA
Sbjct: 1 MPSSKGRMLSFVLVCPTLCSAFLCTRRSLSSLDVGRTTKMSAAVTGRLADKVYLVTGSTDGIGKHTASRLAEEGATVLVHGRRESAVREAVEHV---GGGKGKVEGIVADLSSLRGANHLCDEVLRLTDRLDCLLNNAGVFEADFRHSDDGLEYTFAVNVLAPYVITGRLLDLLAKAPGGGRVVNVASLSASYSLDFDNLQFEKGGYSDHASYSLSKLLDIMFNAELARRAPKGITCNSLDPGTVNTKMLRAGWGMGGIPVKSANDQFYLATSDDVTDSSGEYXXXXXXXXXXXXXXXXEACRRLWRVLEELSGFSYA 315
BLAST of mRNA_F-serratus_M_contig656.17531.1 vs. uniprot
Match: A0A6V2U0S1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2U0S1_HETAK) HSP 1 Score: 274 bits (701), Expect = 3.630e-84 Identity = 142/270 (52.59%), Postives = 187/270 (69.26%), Query Frame = 3
Query: 159 DKVFLVTGSTDGIGRHTASRLAENGATVLVHGRREASVRKAVDFVKDNGSAVSKVKGFVADVSSLRGMNQLCDEVLEKTDRLDCLINNAGVFEADFRHSEDGNEYTFAVNVLAPYVITGRLLSLIARAPDGGRVVNVASLSASYSVDFDNLQFEKGDYSDHASYSLSKLLDIMFNAELARRAPDGVK--CNSLDPGTVNTKMLRAGWGMCGIPIKSANDEFYLATSDGIKGTTGKYFVSRKVYNPPPPAKDNAACRRLWAALEKLSGLSY 962
+K+F+VTGSTDGIGRHT+ +LAE GA V+VHGR A + V ++KD + K+ FVAD+S ++ L D++ EK +DCLINNAGVFE F+ + DG E TFAVNV AP+V+T RLL ++ + P G R++ V+S+S +DF+NLQFEKG Y +H+SYSLSKL D M E+A R G + N+LDPGTVNTKML AGWGMCGIP+ AN+EF+LATS ++G GKYF S + A D A RRLW LE+ +G++Y
Sbjct: 60 EKIFVVTGSTDGIGRHTSKKLAETGARVIVHGRNTARCEETVQWIKDI-TGNEKIDYFVADLSETSNVHTLADQICEKYSHIDCLINNAGVFEEQFQTTPDGFEMTFAVNVAAPFVLTKRLLPMLQKRP-GSRLIIVSSISQGSRIDFENLQFEKGGYDEHSSYSLSKLCDAMLAFEMAARFGSGAQPTVNTLDPGTVNTKMLLAGWGMCGIPVTRANNEFWLATSPDVEGVNGKYFTSCRESRASQVAYDPEARRRLWEYLERTTGVTY 327
BLAST of mRNA_F-serratus_M_contig656.17531.1 vs. uniprot
Match: A0A7S2V5E2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5E2_9STRA) HSP 1 Score: 257 bits (657), Expect = 3.060e-77 Identity = 141/277 (50.90%), Postives = 191/277 (68.95%), Query Frame = 3
Query: 162 KVFLVTGSTDGIGRHTASRLA----ENGATVLVHGRREASVRKAVDFVKDN----GSAVSKVKGFVADVSSLRGMNQLCDEVLEKTDRLDCLINNAGVFEADFRHSEDGNEYTFAVNVLAPYVITGRLLSLIARAPDGGRVVNVASLSASYSVDFDNLQFEKGDYSDHASYSLSKLLDIMFNAELARR--APDGVKCNSLDPGTVNTKMLRAGWGMCGIPIKSANDEFYLATSDGIKGTTGKYFVSRKVYNPPPPAKDNAACRRLWAALEKLSGLSY 962
KV+LVTGSTDGIGRHT RLA + +TV+VHGR A AVD+V++ G +V+ VAD+S++RG+ L ++ + RLDCLINNAGVFE ++ +ED E TFAVNV+APY++T LL L+ G R++NV+S+S Y V+FDNLQF+ G YSDHA+YSLSKLL +M++ E A R +PD + NSLDPGTVNTKML AGWG CGI + A++EF+LATSD ++G G+YFV + + A D+ +L+ LE ++G+SY
Sbjct: 82 KVYLVTGSTDGIGRHTCGRLAALAADGDSTVVVHGRDPARCALAVDWVREKSLSAGGGGCRVESIVADISTIRGVASLANQFKARFGRLDCLINNAGVFEQSYQLTEDNLEMTFAVNVMAPYLLTFLLLDLML-PHKGSRIINVSSISQGYDVNFDNLQFQNGGYSDHAAYSLSKLLMVMYSLESAERIGSPD-LTINSLDPGTVNTKMLYAGWGACGIDVSRADNEFWLATSDQVEGINGRYFVGKGDSSASRAAYDSTNRSKLFEILEGITGVSY 356
BLAST of mRNA_F-serratus_M_contig656.17531.1 vs. uniprot
Match: A0A835YNH2_9STRA (Oxidoreductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNH2_9STRA) HSP 1 Score: 248 bits (633), Expect = 9.230e-75 Identity = 139/274 (50.73%), Postives = 179/274 (65.33%), Query Frame = 3
Query: 153 LKDKVFLVTGSTDGIGRHTASRLAENGATVLVHGRREASVRKAVDFVKDNGSAVSKVKGFVADVSSLRGMNQLCDEVLEKTDRLDCLINNAGVFEADFRHSEDGNEYTFAVNVLAPYVITGRLLSLIARAPDGGRVVNVASLSASYSVDFDNLQFEKGD---YSDHASYSLSKLLDIMFNAELARR-APDGVKCNSLDPGTVNTKMLRAGWGMCGIPIKSANDEFYLATSDGIKGTTGKYFVSRKVYNPPPPAKDNAACRRLWAALEKLSGLSY 962
L K+ LVTGSTDGIGRHTA++LA +GATVLVHGR + + KAV+ VK S +V G +AD+S+L GM L V + T LD L++NAG+FE+ R +EDG E FA NVLAP+V TG LL L+ RA RV+ V+S+S Y+ + QFE+ +SDH SYSLSKL D M + E R A + N+LDPGTVNTKML AGWGMCGI + AND++ LATS+ +KG +GKYF+S + P D A ++LW K+SG Y
Sbjct: 8 LAGKIALVTGSTDGIGRHTATKLATDGATVLVHGRNQERLAKAVEGVKKQSSN-DQVHGILADISTLAGMRTLSTAVHQHTSVLDILVSNAGIFESCRRTTEDGTELVFATNVLAPFVTTGLLLPLL-RASAAARVITVSSMSQGYAAGLVDPQFERDGGSAFSDHRSYSLSKLCDAMLSMEFHERFASPTLTFNTLDPGTVNTKMLDAGWGMCGIAVNRANDQYTLATSENLKGVSGKYFISARETRANPACYDPVARKQLWDYCAKVSGFDY 279
BLAST of mRNA_F-serratus_M_contig656.17531.1 vs. uniprot
Match: A0A7S1HEF3_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1HEF3_HEMAN) HSP 1 Score: 249 bits (635), Expect = 1.450e-74 Identity = 142/307 (46.25%), Postives = 193/307 (62.87%), Query Frame = 3
Query: 54 IVPALCKAFLSTTRSFNPRPLFMAASSTMSGTSLKDKVFLVTGSTDGIGRHTASRLAENGATVLVHGRREASVRKAVDFVKDNGSAVSKVKGFVADVSSLRGMNQLCDEVLEKTDRLDCLINNAGVFEADFRHSEDGNEYTFAVNVLAPYVITGRLLSLIARAPDGGRVVNVASLSASYSVDFDNLQFEKGDYSDHASYSLSKLLDIMFNAELARR---APDGVKCNSLDPGTVNTKMLRAGWGMCGIPIKSANDEFYLATSDGIKGTTGKYFVSRKVYNPPPPAKDNAACRRLWAALEKLSGLSYA 965
+V AL A LS F PL + MSG K+ LVTGSTDGIG+HTA++LA++G VL+HGR + + V +KD ++ F+AD +SL + +L E+ K R+D LINNAGVF + + DGNE TF VNVLAP+++T +L L+ ++ + G+++ V+S+S SY++DFDNLQ +KG +SDH+SYSLSKL + M ELA R A GV N+LDPGTVNTKML AGWGMCGI + AN + LAT + G TG+YFV + PP D +RLW + L+G Y+
Sbjct: 14 LVLALTAASLSLASGFASPPLSLR----MSGGDGSKKIALVTGSTDGIGQHTATKLAQDGFKVLIHGRSQKRIDATVQRIKDKAPGC-ELDTFLADFASLEDVRKLSKELHAKCPRIDLLINNAGVFSQSMQKTVDGNEMTFQVNVLAPFLLTSLVLDLVKKS-EKGKIIIVSSISQSYALDFDNLQMQKG-FSDHSSYSLSKLCNAMHAIELAERLKGALPGVTVNTLDPGTVNTKMLEAGWGMCGIDLSRANYQHTLATDPSLDGETGQYFVGGRNTKASPPCYDTEQRQRLWKIMTDLTGADYS 313
BLAST of mRNA_F-serratus_M_contig656.17531.1 vs. uniprot
Match: A0A2P6TE58_CHLSO (Short chain dehydrogenase reductase family n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TE58_CHLSO) HSP 1 Score: 244 bits (624), Expect = 1.760e-73 Identity = 140/276 (50.72%), Postives = 180/276 (65.22%), Query Frame = 3
Query: 153 LKDKVFLVTGSTDGIGRHTASRLAENGATVLVHGRREASVRKAVDFVK--DNGSAVSKVKGFVADVSSLRGMNQLCDEVLEKTDRLDCLINNAGVFEADFRHSEDGNEYTFAVNVLAPYVITGRLLSLIARAPDGGRVVNVASLSASYSVDFDNLQFEKGDYSDHASYSLSKLLDIMFNAELA---RRAPDGVKCNSLDPGTVNTKMLRAGWGMCGIPIKSANDEFYLATSDGIKGTTGKYFVSRKVYNPPPPAKDNAACRRLWAALEKLSGLSYA 965
L K F VTG+TDGIG HTA RLA GATVLVHGR V +AV V+ +GS + +GFVAD++SL + +L +EV + +D LINNAGVFE R SEDG E T+AVNV AP+++T LL + RVV V+S+SA+ S+D+ NLQ E+G +S H +YSLSKL + +F ELA R A V CN LDPGTVNTKML AGWG GIP+K AN E AT + GT+G+YFV ++ PP A+D A +RLW LE+ +G ++
Sbjct: 5 LLGKTFFVTGATDGIGAHTAQRLAAQGATVLVHGRNPGRVEQAVAAVERAGSGSGGAPPRGFVADLASLAQVRRLAEEVAASSPSVDVLINNAGVFEQQLRKSEDGFELTWAVNVAAPFLLTACLLEAVRE-----RVVVVSSISAASSIDWGNLQQERG-FSAHNAYSLSKLAEQLFTFELADRLRAAGSPVTCNCLDPGTVNTKMLSAGWGSIGIPVKEANYELKAATDPALAGTSGEYFVGGRIARPPSIARDKAEQQRLWRLLEEQTGAKWS 274
BLAST of mRNA_F-serratus_M_contig656.17531.1 vs. uniprot
Match: A0A7S0QHA5_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QHA5_9CRYP) HSP 1 Score: 246 bits (628), Expect = 3.380e-73 Identity = 141/279 (50.54%), Postives = 179/279 (64.16%), Query Frame = 3
Query: 123 AASSTMSGTSLKDKVFLVTGSTDGIGRHTASRLAENGATVLVHGRREASVRKAVDFVKDNGSAVSKVKGFVADVSSLRGMNQLCDEVLEKTDRLDCLINNAGVFEADFRHSEDGNEYTFAVNVLAPYVITGRLLSLIARAPDGGRVVNVASLSASYSVDFDNLQFEKGDYSDHASYSLSKLLDIMFNAELAR---RAPDGVKCNSLDPGTVNTKMLRAGWGMCGIPIKSANDEFYLATSDGIKGTTGKYFVSRKVYNPPPPAKDNAACRRLWAALEKLS 950
A SS G +L K LVTG+TDGIG HTA++LA G VL+HGR +++A+ ++ + V+ F AD SSLR +++ EVLE+ LD LINNAGVF R +EDGNE TF VNVLAP+++T LL ++A+A GRV+ V+S+S S +D+DNLQ EKG +S H SYSLSKL + M ELAR R V N+LDPGTVNTKML AGWG CG+ + ANDEF LAT +G +GKYFV + P D AAC LW LE L+
Sbjct: 53 AGSSAEGGPALGQKTALVTGATDGIGLHTATKLANAGYFVLIHGRDPVRIQEALRKIRLSNPKAG-VESFQADFSSLRDVSRFASEVLEQYQCLDLLINNAGVFSQQMRTTEDGNEMTFQVNVLAPFLLTKALLPIVAKA-QAGRVIIVSSISQSSRIDWDNLQMEKG-FSSHESYSLSKLCNAMHALELARATARTAPHVSVNTLDPGTVNTKMLLAGWGYCGMEVADANDEFLLATDPRFEGVSGKYFVGGRERQAAAPCYDAAACAELWRRLEALT 328
BLAST of mRNA_F-serratus_M_contig656.17531.1 vs. uniprot
Match: A0A1L7H7G4_SACKO (Retinol dehydrogenase 14-like protein 094 n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=A0A1L7H7G4_SACKO) HSP 1 Score: 232 bits (591), Expect = 1.230e-68 Identity = 131/272 (48.16%), Postives = 178/272 (65.44%), Query Frame = 3
Query: 150 SLKDKVFLVTGSTDGIGRHTASRLAENGATVLVHGRREASVRKAVDFVKDNGSAVSKVKGFVADVSSLRGMNQLCDEVLEKTDRLDCLINNAGVFEADFRHSEDGNEYTFAVNVLAPYVITGRLLSLIARAPDGGRVVNVASLSASYSVDFDNLQFEKGDYSDHASYSLSKLLDIMFNAELARRA-PDGVKCNSLDPGTVNTKMLRAGWGMCGIPIKSANDEFYLATSDGIKGTTGKYFVSRKVYNPPPPAKDNAACRRLWAALEKLSGLSY 962
SL +V+L+TGSTDGIG+HTA RLA+ G TVLVHGR A K V+ +K + ++ F AD SSL + Q+ EV E+ R+D LINNAGV+E S++G E T AVNVLAP+++T LL LI + R++ V+S++ +Y++DF NLQFE+ DYS A+Y LSKL DI+F+ EL+ R P G+ N DPGTVNT ML +G GIPI+ A++EFYLAT G TGKYFV + + + D RRLW +E+++G +Y
Sbjct: 2 SLSGRVYLITGSTDGIGKHTALRLAQAGGTVLVHGRNRAKGEKVVEELK-TATGNPNIELFTADFSSLDHIRQMSREVHERHSRIDVLINNAGVWENQRILSQEGYEMTLAVNVLAPFLLTSLLLDLIPKGRVDSRILIVSSMTQAYNIDFSNLQFER-DYSGFAAYGLSKLCDIVFSYELSDRLRPLGIIVNCCDPGTVNTNMLMKSYGPIGIPIEQADNEFYLATDPKFTGVTGKYFVQLQDTSSASISYDIKTRRRLWQIMEQMTGATY 271
BLAST of mRNA_F-serratus_M_contig656.17531.1 vs. uniprot
Match: A0A061S8W3_9CHLO (Short chain dehydrogenase reductase family n=2 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061S8W3_9CHLO) HSP 1 Score: 229 bits (585), Expect = 9.770e-68 Identity = 132/268 (49.25%), Postives = 172/268 (64.18%), Query Frame = 3
Query: 162 KVFLVTGSTDGIGRHTASRLAENGATVLVHGRREASVRKAVDFVKDNGSAVSKVKGFVADVSSLRGMNQLCDEVLEKTDRLDCLINNAGVFEADFRHSEDGNEYTFAVNVLAPYVITGRLLSLIARAPDGGRVVNVASLSASYSVDFDNLQFEKGDYSDHASYSLSKLLDIMFNAELARRAPDG-VKCNSLDPGTVNTKMLRAGWGMCGIPIKSANDEFYLATSDGIKGTTGKYFVSRKVYNPPPPAKDNAACRRLWAALEKLSGLSY 962
KVFLVTGSTDGIG HTA LA G +V+VHGR E VR AV V+ KV + D SSL+ + +L D+V +D L+NNAGV++ S+DG E T+AVNVLAP+V+T L +++ RVVN AS+SA +SVD DNL EKG +S H +YSLSKLLDI+ ELA R + N+LDPGTVNTKML AGWG GIP++SA DEFY++TS ++G +G+YFV ++ P A D LW E+ +G+ +
Sbjct: 13 KVFLVTGSTDGIGLHTAKLLAAGGGSVIVHGRNELRVRDAVAEVERVARGNGKVASYTRDFSSLQEVKRLGDDVKRDFATIDVLVNNAGVYKEGKELSQDGFEMTYAVNVLAPFVLTSALHNIVT-----SRVVNTASISAGHSVDLDNLNQEKG-FSSHNAYSLSKLLDIILTFELAERLKEKPFTVNTLDPGTVNTKMLLAGWGPIGIPVESA-DEFYVSTSPDLEGVSGEYFVGKRRTRAPAAAYDRGLRETLWRLWEQQTGVRF 273
BLAST of mRNA_F-serratus_M_contig656.17531.1 vs. uniprot
Match: A0A8J9RHQ5_9CHLO (Retinol dehydrogenase 14 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RHQ5_9CHLO) HSP 1 Score: 223 bits (567), Expect = 7.470e-65 Identity = 125/267 (46.82%), Postives = 166/267 (62.17%), Query Frame = 3
Query: 153 LKDKVFLVTGSTDGIGRHTASRLAENGATVLVHGRREASVRKAVDFVKDNGSAVSKVKGFVADVSSLRGMNQLCDEVLEKTDRLDCLINNAGVFEADFRHSEDGNEYTFAVNVLAPYVITGRLLSLIARAPDGGRVVNVASLSASYSVDFDNLQFEKGDYSDHASYSLSKLLDIMFNAELARRAPDGVKCNSLDPGTVNTKMLRAGWGMCGIPIKSANDEFYLATSDGIKGTTGKYFVSRKVYNPPPPAKDNAACRRLWAALEKLSG 953
++ K L+TG+TDGIG+HTA++LA+ GATVLVHGR + A ++ V + AD++ L + +L V + +D LINNAGVF +EDG E T+AVNVLAP+++T L++ + R++NV+S+SA +DFDNL EKG +S H +YSLSKL +MFN ELA R N LDPGTVNTKML GWG CGI I+ AN E YLATS + TTG+YFVS + P +D A RLW LE+ +G
Sbjct: 25 MEGKKVLITGATDGIGKHTAAQLAKVGATVLVHGRNQQKADAAAKEIQKETGGQGHVHPYAADMAVLGQVRELASRVQKDHPSIDILINNAGVFPERKILTEDGFEQTWAVNVLAPFLLTSLLVNSVKE-----RIINVSSISAGSRIDFDNLNQEKG-FSAHNAYSLSKLAMMMFNTELAMRISPPPTANCLDPGTVNTKMLLQGWGPCGIDIEDANHELYLATSTDVANTTGQYFVSDRPRRMPSVVQDTNARERLWKILEEQTG 285 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig656.17531.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig656.17531.1 >prot_F-serratus_M_contig656.17531.1 ID=prot_F-serratus_M_contig656.17531.1|Name=mRNA_F-serratus_M_contig656.17531.1|organism=Fucus serratus male|type=polypeptide|length=317bp MNSRIGTLRCLVIVPALCKAFLSTTRSFNPRPLFMAASSTMSGTSLKDKVback to top mRNA from alignment at F-serratus_M_contig656:275305..287785+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig656.17531.1 ID=mRNA_F-serratus_M_contig656.17531.1|Name=mRNA_F-serratus_M_contig656.17531.1|organism=Fucus serratus male|type=mRNA|length=12481bp|location=Sequence derived from alignment at F-serratus_M_contig656:275305..287785+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig656:275305..287785+ >mRNA_F-serratus_M_contig656.17531.1 ID=mRNA_F-serratus_M_contig656.17531.1|Name=mRNA_F-serratus_M_contig656.17531.1|organism=Fucus serratus male|type=CDS|length=1902bp|location=Sequence derived from alignment at F-serratus_M_contig656:275305..287785+ (Fucus serratus male)back to top |