mRNA_F-serratus_M_contig656.17526.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig656.17526.1 vs. uniprot
Match: D8LMR7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMR7_ECTSI) HSP 1 Score: 332 bits (850), Expect = 6.350e-95 Identity = 222/394 (56.35%), Postives = 263/394 (66.75%), Query Frame = 3
Query: 1188 VRDLRRQLHVITTENTRLREAVDEKLRMT---VNGSGTDKELEMLRSQVSAARAVIASSLDGGEENQERSLLELVLLVESRGYKKSEESTAGTIPTTTEQMTGKCSAPAESAAKATAVALRVESTARSELEKRVESLERDLARVGEESGMQSEWAAPMPGCLDAVEPSRDDGGGGRLPRN----------------EDDQYGPKAVATSDIIALKCKAAHLVEKLRQEKHAWLRSEREAQTMGGKVQMLSDHIEKLMVFLKHEATQKAKAHEQQRRLKKELELVKARSSALMRSNQAKDRVVVELREGSKVLEDQLRLMDEKYMELRTKLDWTRTKGEKDVRKARAQASALRAKWAILCGD-VGMGQPTLLDSMKVDA--GPSLCKSESVPRMA 2303
V +L +L EN RLREA ++ + T + G KELE+L+ QV AARAV+ SSL GE+ ER+LLELVLL ES+GYK++E++ A++VES AR+ELEKRVESLERDLAR G+ES QS AA + LD+ D G G +D G VAT+DI+ALK KA LVE+LR EK A L++ER+ Q + GKVQ+LSDHIEKLM+FLKHEATQKAKAHEQQRRL+KELELVKARS+AL+RSNQAKDRV ELREGSK+LEDQLRLMDEKYMELRTKLDWTRTK +KDVR+ARAQASALR KWAILCGD G G +LLD+M+VD GP L S S P A
Sbjct: 287 VTELEERLRRANLENARLREAAEQNIAATPGSADDGGAKKELEVLKHQVEAARAVMLSSLADGEDKPERTLLELVLLAESQGYKQAEKNNXXXXXXXXXXXXXXXXXXXXX------XAVKVESIARAELEKRVESLERDLARAGQESRAQSARAASLQRQLDSGGNGGDQSGSGXXXXXGVAGGVGVVVNSGGGLDDVTIG---VATADIMALKVKATQLVERLRHEKSARLKAERKTQKVAGKVQVLSDHIEKLMMFLKHEATQKAKAHEQQRRLQKELELVKARSTALLRSNQAKDRVTTELREGSKILEDQLRLMDEKYMELRTKLDWTRTKADKDVRRARAQASALRTKWAILCGDGEGGGGSSLLDTMQVDVAPGPHLNHSSSAPGTA 671
BLAST of mRNA_F-serratus_M_contig656.17526.1 vs. uniprot
Match: A0A835YJ85_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ85_9STRA) HSP 1 Score: 148 bits (373), Expect = 2.520e-35 Identity = 86/159 (54.09%), Postives = 109/159 (68.55%), Query Frame = 3
Query: 1743 AVATSDIIALKCKAAHLVEKLRQEKHAWLRSEREAQTMGGKVQMLSDHIEKLMVFLKHEATQKAKAHEQQRRLKKELELVKARSSALMRSNQAKDRVVVELREGSKVLEDQLRLMDEKYMELRTKLDWTRTKGEKDVRKARAQASALRAKWAILCGDVG 2219
A T DI AL+ + LVE LRQEK LR+ E + G V+ LS+H+EKLM +LKHEA KA+AHEQQ RL+KE+EL++AR +AL R AK R + ELREGSK+LEDQLRLMD KY+ELR KLD TR + ++V A+ + LR KW L + G
Sbjct: 27 AAITGDIAALRSRCLQLVEALRQEKGRRLRAVGEGERQAGHVRALSEHVEKLMAYLKHEAAAKARAHEQQLRLQKEVELLRARGAALERKAAAKSRAISELREGSKILEDQLRLMDAKYVELRGKLDRTRARAAREVGAAKRDCTRLRVKWTTLSREFG 185
BLAST of mRNA_F-serratus_M_contig656.17526.1 vs. uniprot
Match: A0A7S1UHS9_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UHS9_9STRA) HSP 1 Score: 150 bits (378), Expect = 3.910e-34 Identity = 89/175 (50.86%), Postives = 123/175 (70.29%), Query Frame = 3
Query: 1758 DIIALKCKAAHLVEKLRQEKHAWLRSEREAQTMGGKVQMLSDHIEKLMVFLKHEATQKAKAHEQQRRLKKELELVKARSSALMRSNQAKDRVVVELREGSKVLEDQLRLMDEKYMELRTKLDWTRTKGEKDVRKARAQASALRAKWAIL------CGDVGMGQPTLLDSMKVDAG 2264
D+ AL+ +A HL + RQEK A R+E ++ KV LSDHIEKLM+ LKHEA KAKA E QRR ++E L++ R+ AL++ N A++RV++E++EGSK+LEDQLRLMDEKY+ELR KLDWTR K ++V+K +A+AS LRA++A+L D + Q TL +M + G
Sbjct: 293 DMKALRMRATHLASRHRQEKEAKYRAEDALRSSNKKVAALSDHIEKLMLHLKHEAASKAKAFELQRRAQRETTLLRKRNQALVKRNTARERVILEMQEGSKILEDQLRLMDEKYLELRVKLDWTRNKATQEVKKFKAEASNLRARFALLHPGEGLLDDARVQQDTLQLAMSMGLG 467
BLAST of mRNA_F-serratus_M_contig656.17526.1 vs. uniprot
Match: A0A7S2RYH1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RYH1_9STRA) HSP 1 Score: 140 bits (354), Expect = 5.390e-34 Identity = 85/158 (53.80%), Postives = 109/158 (68.99%), Query Frame = 3
Query: 1791 LVEKLRQEKHAWLRSEREAQTMGGKVQMLSDHIEKLMVFLKHEATQKAKAHEQQRRLKKELELVKARSSALMRSNQAKDRVVVELREGSKVLEDQLRLMDEKYMELRTKLDWTRTKGEKDVRKARAQASALRAKWAILCGDVGMGQPTLLDSMKVDAG 2264
L+E+ + EK + LR+E + K+ LS HIE+LM+ LKHEA KAKAHE R +E+ L++ R+ L + A+D+V+VELREG+K+LEDQLRLMDEKYMELRTKLD+TR K+V K + QAS LRAKWA+L G PTLLD M V G
Sbjct: 2 LLERQKAEKESRLRAEAATKLANKKILALSQHIERLMLHLKHEAASKAKAHEAAGRATQEVSLLRQRNGVLTKRAGARDQVIVELREGAKILEDQLRLMDEKYMELRTKLDYTRQASTKEVNKYKQQASHLRAKWALLSNAPGH-VPTLLDEMPVPMG 158
BLAST of mRNA_F-serratus_M_contig656.17526.1 vs. uniprot
Match: A0A7S2B9G0_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B9G0_9STRA) HSP 1 Score: 138 bits (347), Expect = 2.320e-32 Identity = 82/158 (51.90%), Postives = 109/158 (68.99%), Query Frame = 3
Query: 1749 ATSDIIALKCKAAHLVEKLRQEKHAWLRSEREAQTMGGKVQMLSDHIEKLMVFLKHEATQKAKAHEQQRRLKKELELVKARSSALMRSNQAKDRVVVELREGSKVLEDQLRLMDEKYMELRTKLDWTRTKGEKDVRKARAQASALRAKWAILCGDVGM 2222
A+ D+ LK KA L+E+ + EK LR+E + KV LS HIEKLM+ LKHEA KAKAHE R +E+ L++AR++AL + ++D ++ EL EG+K+LEDQLRLMDEKYMELRTKLD+TR K+V K +A AS+LRAKWA + G+
Sbjct: 44 ASDDLTLLKAKAMSLLERQKNEKELRLRAEAATKASNKKVLALSQHIEKLMLHLKHEAASKAKAHEAAGRAAQEVSLLRARNAALGKRAASRDSIIKELTEGAKILEDQLRLMDEKYMELRTKLDFTRMTTGKEVTKYKALASSLRAKWAAYSNNQGL 201
BLAST of mRNA_F-serratus_M_contig656.17526.1 vs. uniprot
Match: A0A8J2SP64_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SP64_9STRA) HSP 1 Score: 142 bits (358), Expect = 5.670e-32 Identity = 90/204 (44.12%), Postives = 126/204 (61.76%), Query Frame = 3
Query: 1701 GRLPRNEDDQYGPKA------VATSDIIALKCKAAHLVEKLRQEKHAWLRSEREAQTMGGKVQMLSDHIEKLMVFLKHEATQKAKAHEQQRRLKKELELVKARSSALMRSNQAKDRVVVELREGSKVLEDQLRLMDEKYMELRTKLDWTRTKGEKDVRKARAQASALRAKWAILCGDVGMGQPTLLDSMKVDAGPSLCKSESVP 2294
G+L +ED++ +A A D+ ALK KA L+ + + EK ++E EA+ G KV LSDH+EKLMV LKHE KA+ +Q RR +K+L+ K RS L R N A+++ V+EL+EGSK+LEDQL+LMD +Y+ELR KLDWTR E V++A+ AS LRAKWA+ LLD +++ A +L + P
Sbjct: 295 GKLRHSEDEKTSLRAELRGALAAGDDVRALKHKATELLARGKAEKDQRQKAEAEAKLTGKKVAALSDHVEKLMVHLKHEVGAKAQVTDQLRRAEKDLDTAKLRSRTLARRNNAREKFVLELKEGSKILEDQLKLMDRRYLELRAKLDWTRQHAETQVKRAKKAASTLRAKWALATNS----SQGLLDEVQLPAPGTLTQQSHFP 494
BLAST of mRNA_F-serratus_M_contig656.17526.1 vs. uniprot
Match: A0A812Y6I0_SYMMI (Hypothetical protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812Y6I0_SYMMI) HSP 1 Score: 135 bits (341), Expect = 6.930e-31 Identity = 83/151 (54.97%), Postives = 102/151 (67.55%), Query Frame = 3
Query: 1749 ATSDIIALKCKAAHLVEKLRQEKHAWLRSEREAQTMGGKVQMLSDHIEKLMVFLKHEATQKAKAHEQQRRLKKELELVKARSSALMRSNQAKDRVVVELREGSKVLEDQLRLMDEKYMELRTKLDWTRTKGEKDVRKARAQASALRAKWAI 2201
A DI ALK KA LVE++RQEK LR E E + K++MLSDH+EKLM+ LKHEA K KA +Q R +K V+ + R AKDR++ ELREGSK+LEDQLRLMDEKY+ELRTKLD+ R K VR A+ AS LR K+A+
Sbjct: 201 AAEDIRALKAKAISLVERIRQEKEDKLRIEGEQKQYAKKIEMLSDHVEKLMIHLKHEAAAKIKAVDQLRASEKRNRAVQDNLDLVSRKAAAKDRLIAELREGSKILEDQLRLMDEKYLELRTKLDYAREMAAKKVRNAQKTASELRVKFAL 351
BLAST of mRNA_F-serratus_M_contig656.17526.1 vs. uniprot
Match: A0A7S2DJE2_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DJE2_9STRA) HSP 1 Score: 132 bits (331), Expect = 8.410e-31 Identity = 89/194 (45.88%), Postives = 124/194 (63.92%), Query Frame = 3
Query: 1758 DIIALKCKAAHLVEKLRQEKHAWLRSEREAQTMGGKVQMLSDHIEKLMVFLKHEATQKAKAHEQQRRLKKELELVKARSSALMRSNQAKDRVVVELREGSKVLEDQLRLMDEKYMELRTKLDWTRTKGEKDVRKARAQASALRAKWAILCGDVGMGQPTLLDSM-KVDAGPSLCKSE---SVPRMATKSKKDGI 2327
D++ LK + A LV++ RQEK R+E + KV +LS H+EKLM+ LKHEA KAKA E R +E+ L++ R+ AL + +KD ++ EL EG+K+LEDQLRLMDEKYME+RTKLD+TRT ++V K + ++S LRAKWA TLLD + + ++G S+ KSE + P T S K G+
Sbjct: 14 DLLNLKGRQAALVDRQRQEKENRSRAEAATKNAIKKVVLLSQHVEKLMLHLKHEAVSKAKAQEAAGRAAQEVSLMRTRNKALNKRAASKDVMIRELSEGAKILEDQLRLMDEKYMEIRTKLDFTRTTSTREVAKHKQESSVLRAKWAQYSNST-----TLLDDVGEEESGISMEKSEGWMTSPSNKTSSSKGGV 202
BLAST of mRNA_F-serratus_M_contig656.17526.1 vs. uniprot
Match: A0A6G0WU58_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WU58_9STRA) HSP 1 Score: 124 bits (311), Expect = 1.470e-25 Identity = 84/201 (41.79%), Postives = 120/201 (59.70%), Query Frame = 3
Query: 1746 VATSDIIALKCKAAHLVEKLRQEKHAWLRSEREAQTMGGKVQMLSDHIEKLMVFLKHEATQKAKAHEQQRRLKKELELVKARSSALMRSNQAKDRVVVELREGSKVLEDQLRLMDEKYMELRTKLDWTRTKGEKDVRKARAQASALRAKW--AILCGDVGMGQPTLLDSMKVDAGPSLCKSESVPRMATKSKKDGIPTKGN 2342
A D+ ALK K A L + R EK R++ K+ LS+HIEKLMV LKHEA KAKA + R ++ E + ++ L + + AKDRV+ EL++GSK+LEDQLRLMDEKY+ELR KLDWTR+ +++ +K + + +ALR KW A+ G + P L +K A SES +++ + +D P +GN
Sbjct: 377 AAMGDVKALKEKTAELAGRQRTEKELRSRTDAALVEANEKIVALSEHIEKLMVHLKHEAAAKAKAQDALRTVESERRELTDTTATLAKKSTAKDRVIAELQQGSKILEDQLRLMDEKYIELRNKLDWTRSTSQRENKKLQQELNALRCKWQRAMDTGQIEEEAPLSLKPLKKMATLGTSMSESKLALSSNNAEDR-PLRGN 576
BLAST of mRNA_F-serratus_M_contig656.17526.1 vs. uniprot
Match: W4GXL6_9STRA (Uncharacterized protein n=14 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GXL6_9STRA) HSP 1 Score: 122 bits (305), Expect = 8.680e-25 Identity = 73/152 (48.03%), Postives = 97/152 (63.82%), Query Frame = 3
Query: 1746 VATSDIIALKCKAAHLVEKLRQEKHAWLRSEREAQTMGGKVQMLSDHIEKLMVFLKHEATQKAKAHEQQRRLKKELELVKARSSALMRSNQAKDRVVVELREGSKVLEDQLRLMDEKYMELRTKLDWTRTKGEKDVRKARAQASALRAKWAI 2201
A D+ ALK K A L + R EK R++ K+ LS+HIEKLMV LKHEA KAKA E + ++ + + S+ L + AKDRV+ EL++GSK+LEDQLRLMDEKY+ELR KLDWTRT +KD R+ + + + LR KW +
Sbjct: 383 AAMDDVKALKEKTAELAGRQRTEKELRARTDAALVEANEKIVALSEHIEKLMVHLKHEAAAKAKALEALKAVEADRRDLADASATLTKKTNAKDRVISELQQGSKILEDQLRLMDEKYIELRNKLDWTRTTSQKDTRRLQHELNTLRCKWQL 534 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig656.17526.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig656.17526.1 >prot_F-serratus_M_contig656.17526.1 ID=prot_F-serratus_M_contig656.17526.1|Name=mRNA_F-serratus_M_contig656.17526.1|organism=Fucus serratus male|type=polypeptide|length=780bp MDVNTASDSLQISDMQESLSERRNNGNVDKKISNNQDDEDDSAYDLKDFEback to top mRNA from alignment at F-serratus_M_contig656:114012..120470+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig656.17526.1 ID=mRNA_F-serratus_M_contig656.17526.1|Name=mRNA_F-serratus_M_contig656.17526.1|organism=Fucus serratus male|type=mRNA|length=6459bp|location=Sequence derived from alignment at F-serratus_M_contig656:114012..120470+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig656:114012..120470+ >mRNA_F-serratus_M_contig656.17526.1 ID=mRNA_F-serratus_M_contig656.17526.1|Name=mRNA_F-serratus_M_contig656.17526.1|organism=Fucus serratus male|type=CDS|length=4680bp|location=Sequence derived from alignment at F-serratus_M_contig656:114012..120470+ (Fucus serratus male)back to top |