mRNA_F-serratus_M_contig656.17522.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig656.17522.1 vs. uniprot
Match: A0A6G7NUH2_SACJA (Nuf2p n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A6G7NUH2_SACJA) HSP 1 Score: 375 bits (964), Expect = 2.020e-124 Identity = 248/389 (63.75%), Postives = 311/389 (79.95%), Query Frame = 1
Query: 1 KVLRNPQQHVAQVSMIFEKLVETATGVTKEDMNQPAFAALSVLSYPDIHEDNIAFMALFRAVCKMMKISRIDDFSLKDMSEPKPKRLIRQLSAVVNFIRFREGKESMFREAMAKKRAIREKARTAQLRHSEVVEELEDLQDKMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKDRVAAAQTALKQAEMEKERLQGQVVNSPQRILREVEDQQQALEQELADAEGEAKNTQTLQHSVAVMSRAKREMVKASASIDEASAEPGTTAATELSKQESAFKEVKSTQRKIVDRKGECAARASEISEEQRKLVRFEEKLSHLRKQATFKTEATVTELDAVRTAIAETEMQWKEANGRLEEARTVMDQLKQDKENVKSQI 1167
+VL +P+QH +QV M+FEKLVET GVTKE+M+QPAFA L LS P++H+DNI F+ALFR VCKMMKIS+IDDF+LKDMS+P RL RQLSA +NF+RFRE K+ M++E +A+K+++ ++ ++LR+ ++ ++L+D+Q +M XXXXXXXXXXXXXXXXXXXXXXXXXXX AKD+VA++ ALKQAE+EKERLQGQVVNSPQRILREV DQQQAL+QELAD + E +NTQ LQ SV V+ RAKRE+VKA+ASI+EA TELSKQESA+KEVKSTQRKIV+++GE AARASEISE QR+LVR EEKL HL+KQA FKTEAT ELDAVRTAIA+ E QW EA+GRLE+A++ ++Q Q+K ++ QI
Sbjct: 33 EVLSDPKQHASQVVMVFEKLVETTMGVTKEEMSQPAFAGLGCLSNPELHDDNITFLALFRNVCKMMKISKIDDFALKDMSDPTRPRLRRQLSAAINFVRFREEKDVMYQEWLARKKSVAAASKASKLRNIKLADDLDDVQSRMAEKKKAIEDIXXXXXXXXXXXXXXXXXXXXXXXXXXXLKKANFAAKDKVASSMAALKQAEVEKERLQGQVVNSPQRILREVADQQQALDQELADVQAELQNTQKLQQSVVVLGRAKRELVKAAASIEEAG--------TELSKQESAYKEVKSTQRKIVEKRGEYAARASEISENQRRLVRLEEKLFHLQKQAAFKTEATAGELDAVRTAIADKEGQWSEAHGRLEKAKSAVEQHLQEKNLLEDQI 413
BLAST of mRNA_F-serratus_M_contig656.17522.1 vs. uniprot
Match: D8LMS3_ECTSI (Centromere-associated protein NUF2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMS3_ECTSI) HSP 1 Score: 302 bits (773), Expect = 1.220e-95 Identity = 209/389 (53.73%), Postives = 283/389 (72.75%), Query Frame = 1
Query: 1 KVLRNPQQHVAQVSMIFEKLVETATGVTKEDMNQPAFAALSVLSYPDIHEDNIAFMALFRAVCKMMKISRIDDFSLKDMSEPKPKRLIRQLSAVVNFIRFREGKESMFREAMAKKRAIREKARTAQLRHSEVVEELEDLQDKMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKDRVAAAQTALKQAEMEKERLQGQVVNSPQRILREVEDQQQALEQELADAEGEAKNTQTLQHSVAVMSRAKREMVKASASIDEASAEPGTTAATELSKQESAFKEVKSTQRKIVDRKGECAARASEISEEQRKLVRFEEKLSHLRKQATFKTEATVTELDAVRTAIAETEMQWKEANGRLEEARTVMDQLKQDKENVKSQI 1167
++L +P+ HV Q++M+FE+LVET GVTKE+M+QP FA L L+YP++H+++IAF+ALFR VC+MM+ISRI+DF+LKDMS+P KRL RQLSAV+NF+RF+EGKE ++ +AMAKK+ + ++ EE ED+QD+M XXXXXXXXXXXXXXXXXXXXXXXXXXXX LQ QVV+SP+RILREV D QQ+LEQEL++ E E + Q+ +HSV VM++A+RE+ KA+A+I+EA ATELSKQESA +EVK+TQ KI +++ + A R+SE +E QR+LVRFEEKL+HLRKQA FKTEA E++A+R AIAE E + EA+ R+EE++ V+DQ +Q+KENV++++
Sbjct: 33 QMLASPKDHVPQLTMLFERLVETTLGVTKEEMSQPVFAGLGCLTYPELHDESIAFLALFRNVCRMMRISRIEDFALKDMSDPNQKRLRRQLSAVINFVRFKEGKEHLYLDAMAKKQRLAAXXXXXXXXXXKLQEEHEDIQDRMAEKNKAIEAVNAKHEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLQAQVVSSPKRILREVSDLQQSLEQELSEVEAETRKAQSFKHSVVVMNKARRELAKATANIEEA--------ATELSKQESAMREVKNTQYKIHEKRNDFATRSSEKAELQRRLVRFEEKLAHLRKQAAFKTEAMAGEMEAIRAAIAENEAHYNEAHARMEESQAVLDQYRQEKENVEAEV 413
BLAST of mRNA_F-serratus_M_contig656.17522.1 vs. uniprot
Match: A0A835ZCC3_9STRA (Nuf2 family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCC3_9STRA) HSP 1 Score: 184 bits (466), Expect = 5.660e-50 Identity = 128/358 (35.75%), Postives = 189/358 (52.79%), Query Frame = 1
Query: 1 KVLRNPQQHVAQVSMIFEKLVETATGVTKEDMNQPAFAALSVLSYPDIHEDNIAFMALFRAVCKMMKISRIDDFSLKDMSEPKPKRLIRQLSAVVNFIRFREGKESMFREAMAKKRAIREKARTAQLRHSEVVEELEDLQDKMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKDRVAAAQTALKQAEMEKERLQGQVVNSPQRILREVEDQQQALEQELADAEGEAKNTQTLQHSVAVMSRAKREMVKASASIDEASAEPGTTAATELSKQESAFKEVKSTQRKIVDRKGECAARASEISEEQRKLVRFEEKLSHLRKQATFKTEATVTELDAVRTAIAETE 1074
+ L NPQ++V +V +F KLVE GVT+E+MNQP FA L+VL+Y +HED++ +A FRAV KMM S + DFS D+ P RL RQLSAV+NF FREG+ ++ +K + + + + EL L ++ KDR+AA K+A ME+ERLQ Q+V+SP RI RE+ DQQ ALEQE + K Q + + A ++RA+RE+VKA+ ++D+ E L +Q+ A +EV++ QR + + + AA A++ + +R R +EKL+HLR+Q + EA L A+R +AE E
Sbjct: 42 ETLDNPQKNVQEVQNVFAKLVEFTMGVTREEMNQPVFAGLNVLNYAQLHEDSVPELAFFRAVSKMMTASCVHDFSFNDLQTPNKTRLKRQLSAVINFCMFREGRMQVYNALATEKENLLANVQALGEDNERLERELASLTERTSQEAAETEMVEADCRAMEAQISALNREQAATRAQSGDLKRQANGLKDRLAALDLETKEAIMERERLQAQIVSSPDRIRREMADQQAALEQERTEGMAAEKQAQRTELTAANVARAEREVVKATRALDDIEEE--------LGRQKEALREVRAAQRALAENGAKSAAAAADAAVLRRHAARLDEKLAHLRRQGRARAEAADASLAALRAELAEEE 391
BLAST of mRNA_F-serratus_M_contig656.17522.1 vs. uniprot
Match: W7TPN5_9STRA (Kinetochore protein Nuf2 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TPN5_9STRA) HSP 1 Score: 115 bits (288), Expect = 1.290e-24 Identity = 73/262 (27.86%), Postives = 131/262 (50.00%), Query Frame = 1
Query: 7 LRNPQQHVAQVSMIFEKLVETATGVTKEDMNQPAFAALSVLSYPDIHEDNIAFMALFRAVCKMMKISRIDDFSLKDMSEPKPKRLIRQLSAVVNFIRFREGKESMFREAMAKKRAIREKARTAQLRHSEVVEELEDLQDKMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKDRVAAAQTALKQAEMEKERLQGQVVNSPQRILREVEDQQQALEQELADAEGEAKNTQTLQHSVAVMSRAKREMVK 792
+ +H + +E LVE TG+TKE+M+QPAF+ ++ L+YP++HE++I +A FRA KMM + + DFS+KD+ P+PKR+ R LSA++NF +FRE + M+ E K+ + + + Q V +EL L+++ K+ + A +AL+ E+E+ +GQ+V SP+R+ RE+ + +E E + ++ + + V + + ++E+ K
Sbjct: 64 INEADKHRDAIRRAYEYLVEICTGITKEEMSQPAFSGINALNYPELHEESIPELAFFRACTKMMTVCGVHDFSMKDLLSPEPKRVRRHLSAIINFAKFREERLVMYSELAVKRDELLDNLKRLQDEEVGVAKELGVLREQAAAESEEMEGLEQACEVAEAELEQLNKRQAEIRAQGAELKKQSQDLKESIGKASSALESGIEEREKTRGQIVRSPERVRRELASAAEEVETEKKEGLATERDAREMHLRVQAVQKGEKEVGK 325
BLAST of mRNA_F-serratus_M_contig656.17522.1 vs. uniprot
Match: A0A4D9D8Z4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D8Z4_9STRA) HSP 1 Score: 116 bits (291), Expect = 1.440e-24 Identity = 74/263 (28.14%), Postives = 132/263 (50.19%), Query Frame = 1
Query: 7 LRNPQQHVAQVSMIFEKLVETATGVTKEDMNQPAFAALSVLSYPDIHEDNIAFMALFRAVCKMMKISRIDDFSLKDMSEPKPKRLIRQLSAVVNFIRFREGKESMFREAMAKKRAIREKARTAQLRHSEVVEELEDLQDKMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKDRVAAAQTALKQAEMEKERLQGQVVNSPQRILREVEDQQQALEQELADAEGEAKNTQTLQHSVAVMSRAKREMVKA 795
+ +H + +E LVE TG+TKE+M+QPAF+ ++ L+YP++HE++I +A FRA KMM + + DFS+KD+ P+PKR+ R LSA++NF +FRE + M+ E K+ + + + Q V +EL L+++ K+ + A +AL+ E+E+ +GQ+V SP+R+ RE+ + +E E + ++ + + V + + ++E+ KA
Sbjct: 718 INEADKHRDAIRRAYEYLVEICTGITKEEMSQPAFSGINALNYPELHEESIPELAFFRACTKMMTVCGVHDFSMKDLLSPEPKRVRRHLSAIINFAKFREERLVMYSELAVKRDELLDNLKRLQDEEVGVAKELGVLREQAAAEREEMEGLEQACEVAEAELEQLNKRQAEIRAQGAELKKQSQDLKESIGKASSALESGIEEREKTRGQIVRSPERVRRELASAAEEVETEKKEGLATERDAREMHLRVQAVQKGEKEVGKA 980
BLAST of mRNA_F-serratus_M_contig656.17522.1 vs. uniprot
Match: A0A0U9HIA3_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A0U9HIA3_KLENI) HSP 1 Score: 107 bits (268), Expect = 3.880e-22 Identity = 95/362 (26.24%), Postives = 178/362 (49.17%), Query Frame = 1
Query: 37 VSMIFEKLVETATGVTKEDMNQPAFAALSVLSYPDIHEDNIAFMALFRAVCKMMKISRIDDFSLKDMSEPKPKRLIRQLSAVVNFIRFREGKESMFREAMAKKRAIREKARTAQLRHSEVVEELEDLQDKMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKDRVAAAQTALKQAEMEKERLQGQVVNSPQRILREVEDQQQALEQELADAEGEA-KNTQTLQHSVAVMSRAKREMVKASASIDEASAEPGTTAATELSKQESAFKEVKSTQRKIVDRKGECAARASEISEEQRKLVRFEEKLSHLRKQATFKTEATVTELDAVRTAIAETEMQWKEANGRLEEART 1119
V +++ V+ +T+E++ QP F A++ L YP++H+D+I +A FRA+ K+MK++ +++F LKDM P + R LSA++N++ FRE K F+E + ++ E+ + + + ++ EL+ ++ + D++A+ + AL +A E+ L+G++V SP+++ R +E+ A+E+E A A GEA + + LQ + + +RE++K ++EA AE ++K ++ ++ K+ + KI + + QR+ E+L L +Q K EA V L+ R AE E + KE +L E +T
Sbjct: 39 VKPLYQGFVQLLMQMTREELQQPVFHAMAELEYPELHDDSIGDLASFRALQKLMKVAGVNNFCLKDMHMPDTLGVRRNLSALLNYVMFREDKLQTFQEHQDRSDSLLERKQQLEEENLQLTSELKRIEAERAADRPAVEELERETSGLQVTIVALNKEQAALNKENHRLKQQANELADQLASEKFALLEAHQERAELRGKIVESPEKLQRTLEELGAAVERERA-AIGEAERRARDLQAKLECCGKVEREVMKTVKLMEEAEAE--------IAKYKTVSRDAKAAKAKIKANEDTAWELDRVLQHLQRQHQSAMERLQRLEQQGALKREAAVAALEEARALKAEAEAEHKETMAKLTERQT 391
BLAST of mRNA_F-serratus_M_contig656.17522.1 vs. uniprot
Match: K3X7R5_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X7R5_GLOUD) HSP 1 Score: 107 bits (266), Expect = 7.890e-22 Identity = 81/252 (32.14%), Postives = 129/252 (51.19%), Query Frame = 1
Query: 37 VSMIFEKLVETATGVTKEDMNQPAFAALSVLSYPDIHEDNIAFMALFRAVCKMMKISRIDDFSLKDMSEPKPKRLIRQLSAVVNFIRFREGKESMFREAMAKKRAIREKARTAQLRHSEVVEELEDLQDKMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKDRVAAAQTALKQAEMEKERLQGQVVNSPQRILREVEDQQQALEQELADAEGEAKNTQTLQHSVAVMSRAKREMVK 792
+ + E +E GVT+E+MNQPAFA LS LSYP++HED++ +A FR K++ + DF LKD+ P PKR+ RQLSA++NF +FRE + + F E + + +K Q + + +L +L + XXXXXXX D + + Q + +AE E ERL+G++VNSP+R+ +E+E +LE + + + L +RA+++M+K
Sbjct: 59 IRKVLEVFIENIMGVTREEMNQPAFAGLSALSYPELHEDSVPELAFFRTAAKLLTACGVYDFGLKDIITPTPKRVRRQLSALINFAKFREERLAAFSELTRETDHLIKKKMGLQEENELLQRQLNELLQEHEAEAPAIKQITDETAQLEAEINVLNKRQAVMRHETSEXXXXXXXXXDEMTSYQFNILEAEKEIERLRGKIVNSPERVKKEIESIAVSLEDAKEEVNAMERRHRELLAYSDTFARAEKDMLK 310
BLAST of mRNA_F-serratus_M_contig656.17522.1 vs. uniprot
Match: A0A2D4C6D6_PYTIN (Uncharacterized protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C6D6_PYTIN) HSP 1 Score: 103 bits (258), Expect = 9.530e-21 Identity = 50/101 (49.50%), Postives = 71/101 (70.30%), Query Frame = 1
Query: 28 VAQVSMIFEKLVETATGVTKEDMNQPAFAALSVLSYPDIHEDNIAFMALFRAVCKMMKISRIDDFSLKDMSEPKPKRLIRQLSAVVNFIRFREGKESMFRE 330
VA + + E +ET GV++E+MNQP FA LSVLSYP++HED+I + FR K+M+ I DFS+KD+ P PKR+ RQLSA++NF +FR+ + + F E
Sbjct: 58 VAAIRKVLEVFIETTMGVSREEMNQPQFAGLSVLSYPELHEDSIPELTFFRQASKLMQACGIYDFSMKDVLTPNPKRVRRQLSALINFAKFRDERVAAFAE 158
BLAST of mRNA_F-serratus_M_contig656.17522.1 vs. uniprot
Match: A0A662XCM7_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XCM7_9STRA) HSP 1 Score: 103 bits (257), Expect = 1.350e-20 Identity = 88/266 (33.08%), Postives = 143/266 (53.76%), Query Frame = 1
Query: 31 AQVSMIFEKLVETATGVTKEDMNQPAFAALSVLSYPDIHEDNIAFMALFRAVCKMMKISRIDDFSLKDMSEPKPKRLIRQLSAVVNFIRFREGKESMFREAMAKKRAIREKARTAQLRHSEVVEELEDLQDKMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKDRVAAAQTALKQAEMEKERLQGQVVNSPQRILREVEDQQQALEQELADA-EGEAKNTQTLQHSVAVMSRAKREMVKASASIDEASAE 825
A V + E +E+A GVT+E++ QPAF LS LS+P++H ++I ++ FRA +++ + DF L+D+ P PKR+ RQLSA++NF +FRE + + F E + A+ ++ Q +++ + EL+ L + XXXXXXXXX +D VA+A+ + +A E ERL GQ+V SP+R+ +E+ +ALE + E E + + L HS RA++++ K A +DE + E
Sbjct: 44 AAVRRVLEAFLESAMGVTREELQQPAFTGLSALSFPELHAESIPELSFFRASQRLLAACGVADFGLQDLLAPSPKRVRRQLSALINFAKFREERLAAFGELTGRTDALLQRKTALQEQNAALQRELDALLQQQQTEAPAKRQLEXXXXXXXXXINGLNQRQAVLRHEAKTLKEARQGREDDVASARFNVLEAAKEIERLDGQIVTSPERVKKELRGIAEALEGAKGELHEMEREYGKLLAHSD-TYERAEKDLAKTFALLDEVARE 308
BLAST of mRNA_F-serratus_M_contig656.17522.1 vs. uniprot
Match: A0A7S2W6E6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W6E6_9STRA) HSP 1 Score: 102 bits (255), Expect = 3.430e-20 Identity = 110/335 (32.84%), Postives = 178/335 (53.13%), Query Frame = 1
Query: 22 QHVAQVSMIFEKLVETATGVTKEDMNQPAFAALSVLSYPDIHEDNIAFMALFRAVCKMMKISRIDDFSLKDMSEPKPKRLIRQLSAVVNFIRFREGKESMFREAMAKKRAIREKARTAQLRHSEVVEELEDLQDKMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKDRVAAAQTALKQAEMEKERLQGQVVNSPQRILREVEDQQQALEQELADAEGEAKNTQTLQHSVAVMSRAKREMVKASASIDEASAEPGTTAATELSKQESAFKEVKSTQRKIVDRKGECAARASEISEEQRKLVRFEEKLSHLRKQATFKTEA 1026
+HVA V IFE L+E +G KE+++ P F A +S+ +HED++ +A +RA+ K+M + DFS D+ P+PKRL +QLSA++NF++F E + ++ A + ++ + + ++ +LEDL+++ XXXXXXXXXXXXXXXXXXXXXXXXX +++ A A E +LQ QVV+SP+R+ RE+ + Q+AL+QE + E + + V+ A ++ +A A +E A SK ++K+ + K + E + + +R+ R ++KL HL+ Q K A
Sbjct: 96 KHVATVRRIFENLLEALSGTRKEELHMPVFTAHQNMSWSQLHEDSVPELAFWRALSKLMFTCGVGDFSRSDIISPQPKRLRKQLSALINFVKFHEERMELYGRITAARDEYLDRLQVVTQENQQLQTQLEDLREETKVQREEISSLDEAIANTSKXXXXXXXXXXXXXXXXXXXXXXXXXXXEQLGEAGLERGNASAEIRKLQSQVVHSPERVRREMHESQRALQQERREGEAAEQAALVATTATKVVDEANLKVQEALAVAEEV--------AEHTSKWHDTVGQIKAKEAKTAVNRKEASEVMETALDVERQNARLQDKLQHLQAQGESKQRA 422 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig656.17522.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig656.17522.1 >prot_F-serratus_M_contig656.17522.1 ID=prot_F-serratus_M_contig656.17522.1|Name=mRNA_F-serratus_M_contig656.17522.1|organism=Fucus serratus male|type=polypeptide|length=389bp KVLRNPQQHVAQVSMIFEKLVETATGVTKEDMNQPAFAALSVLSYPDIHEback to top mRNA from alignment at F-serratus_M_contig656:68957..73538+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig656.17522.1 ID=mRNA_F-serratus_M_contig656.17522.1|Name=mRNA_F-serratus_M_contig656.17522.1|organism=Fucus serratus male|type=mRNA|length=4582bp|location=Sequence derived from alignment at F-serratus_M_contig656:68957..73538+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig656:68957..73538+ >mRNA_F-serratus_M_contig656.17522.1 ID=mRNA_F-serratus_M_contig656.17522.1|Name=mRNA_F-serratus_M_contig656.17522.1|organism=Fucus serratus male|type=CDS|length=2334bp|location=Sequence derived from alignment at F-serratus_M_contig656:68957..73538+ (Fucus serratus male)back to top |