mRNA_F-serratus_M_contig650.17491.1 (mRNA) Fucus serratus male
|
Overview
Homology
BLAST of mRNA_F-serratus_M_contig650.17491.1 vs. uniprot
Match: D7G621_ECTSI (Histidine--tRNA ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G621_ECTSI) HSP 1 Score: 723 bits (1866), Expect = 3.360e-256 Identity = 402/591 (68.02%), Postives = 449/591 (75.97%), Query Frame = 1
Query: 28 MRLKVQMLMSVISGGIEPA--VVRAFIPSLSATMASSGVRLLSLSSMIQPTAAPGRC-SWVRCQGRRAAAATSASSTSPTGSKAFPFLLYGH---SRRCLACTGEATEGGGEGGRGGGRTSAAVLQDSERRSNAGESARP----------VEKLDLNPPKGTRDVFPVDMRLRNWLFGHWRHVALSFGFEEYDAPVLENEALYVRKSGEEVTQQLYCFEDKGGRRVSLRPEMTPSLARMVMAKRKSLTFPVKWFSLPQCWRYERMTRGRRREHYQWNMDIWGVPGVEAEAELLGAMVAFFERVGLRAEDVGIKVNSRGVLTEVLQELGVPEEKHAATCVLVDKLDKVPLEAISDDLATLGLQESSVKRLLEVMEVGDIDGVQSVLGKESPAADELRRLFVLADSYGISDWLVLDCSVVRGLAYYTGTVFEAFDRRGTLRAICGGGRYDALLESFGGEPLPAAGFGFGDAVIMELLSDKGLLPEDQGPGFTAVVFGYNAELQGAATEVAGVLRRGGLSVDLVLEARKTKANFKHASRVGASHAVMVAPAEWKEGKASPTLRPER*KRQVSVKDLRTSEQSEVAVADVAEHIL 1752
MRL+ QML+SV SG + PA VVRAF+PS AS+ VR+ S S R + A SA P+ +A +G SRR +AC+ E+ GG+ G G VEKLDL PPKGTRDVFP DMRLRNWLFGHWR VA SFGFEEYDAPVLE+E+LY RKSGEEVTQQLYCFEDKGGRRVSLRPEMTPSLARMVMAKRKSLT PVKWFS+PQCWRYERMTRGRRREHYQWNMDIWGV GV AEAELLGAMV FFERVGLRAEDVGI+VNSRGVLTEVL LGVP +KH ATCVLVDKLDK+PLEA++ DLA LGL+E+SVKRLLEVME+ D+ GV++ LGKESPAA+ELR+LF LA+SYGISDWLVLDCSVVRGLAYYTGTVFEAFDRRG LRAI GGGRYDALLESFGGE LPAAGFGFGDAVI+ELLSD+GLLP++ GPG TAVVFG++ ELQGAATEVA LRR G+SVDLVL+ RKTKANFKHA+RVGA++ VMVAP+EW+ GK VSVKDLRTS+Q E+ V +VA HIL
Sbjct: 1 MRLQAQMLLSVASGSLGPAATVVRAFVPS-----ASTAVRVHSAXXXXXXXXXXXXXXSTTRLR------AFSAGEPGPSVDRA-AISSWGRGSSSRRSIACSAES---GGKAGALGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVEKLDLKPPKGTRDVFPEDMRLRNWLFGHWRGVASSFGFEEYDAPVLESESLYTRKSGEEVTQQLYCFEDKGGRRVSLRPEMTPSLARMVMAKRKSLTLPVKWFSIPQCWRYERMTRGRRREHYQWNMDIWGVSGVAAEAELLGAMVTFFERVGLRAEDVGIRVNSRGVLTEVLHSLGVPGDKHTATCVLVDKLDKMPLEAVAGDLAELGLEETSVKRLLEVMELRDMGGVEAFLGKESPAAEELRKLFALAESYGISDWLVLDCSVVRGLAYYTGTVFEAFDRRGKLRAIAGGGRYDALLESFGGEALPAAGFGFGDAVIVELLSDRGLLPKEAGPGATAVVFGWDDELQGAATEVAASLRREGISVDLVLQPRKTKANFKHATRVGATYVVMVAPSEWEAGK-------------VSVKDLRTSDQKELPVGEVASHIL 563
BLAST of mRNA_F-serratus_M_contig650.17491.1 vs. uniprot
Match: A0A835Z4P1_9STRA (Histidine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4P1_9STRA) HSP 1 Score: 573 bits (1476), Expect = 2.580e-199 Identity = 288/437 (65.90%), Postives = 337/437 (77.12%), Query Frame = 1
Query: 439 LDLNPPKGTRDVFPVDMRLRNWLFGHWRHVALSFGFEEYDAPVLENEALYVRKSGEEVTQQLYCFEDKGGRRVSLRPEMTPSLARMVMAKRKSLTFPVKWFSLPQCWRYERMTRGRRREHYQWNMDIWGVPGVEAEAELLGAMVAFFERVGLRAEDVGIKVNSRGVLTEVLQELGVPEEKHAATCVLVDKLDKVPLEAISDDLATLGLQESSVKRLLEVMEVGDIDGVQSVLGKESPAADELRRLFVLADSYGISDWLVLDCSVVRGLAYYTGTVFEAFDRRGTLRAICGGGRYDALLESFGGEPLPAAGFGFGDAVIMELLSDKGLLPEDQGPGFTAVVFGYNAELQGAATEVAGVLRRGGLSVDLVLEARKTKANFKHASRVGASHAVMVAPAEWKEGKASPTLRPER*KRQVSVKDLRTSEQSEVAVADVAEHI 1749
+D NP KGTRD++P DMRLR WLFGHWR VA +GFEEYDAPVLE+EALYVRKSGEEVTQQLY FEDKG RRV+LRPEMTPSLARM+MA+R +T PVKWFSLPQCWRYERMTRGRRREHYQWNMDIWGV GVEAEAELL A+V+FF +G+ + DVG+KVNSR L E++ LGVPE KHAATCVLVDKL+KVPL+A+ D+A LGL + +V +LL VME ID +++ +G +S A ELRRLF LA++YG +DWLV D SVVRGLAYYTG VFE FDR G LRAICGGGRYD LLESFGGE LPA GFGFGDAVI+ELL D+ LLP+ A+V ++ ELQGAAT +A LR+ G SVDLV+E+RK K FKHA R GA +VAP EW E R+V+VKD+ T +Q V D+A +I
Sbjct: 1 MDANPVKGTRDMYPEDMRLRTWLFGHWRKVAEQYGFEEYDAPVLESEALYVRKSGEEVTQQLYNFEDKGERRVALRPEMTPSLARMIMARRNGVTLPVKWFSLPQCWRYERMTRGRRREHYQWNMDIWGVQGVEAEAELLAAVVSFFTNIGITSADVGMKVNSRAALGEIMTSLGVPEAKHAATCVLVDKLEKVPLDALRSDMAALGLTDETVTKLLAVMESKSIDALEAAVGADSAAVRELRRLFELAEAYGYADWLVFDASVVRGLAYYTGIVFEGFDRSGALRAICGGGRYDKLLESFGGEALPACGFGFGDAVIVELLKDRNLLPDTTRGTVEALVSAFSPELQGAATSIAAALRQQGRSVDLVIESRKPKWVFKHADRRGARFVCLVAPQEWAE-------------RKVNVKDMVTGDQLAVQRDDLATYI 424
BLAST of mRNA_F-serratus_M_contig650.17491.1 vs. uniprot
Match: B8C1W7_THAPS (Histidine--tRNA ligase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C1W7_THAPS) HSP 1 Score: 553 bits (1426), Expect = 1.660e-190 Identity = 287/461 (62.26%), Postives = 342/461 (74.19%), Query Frame = 1
Query: 358 GGRTSAAV----LQDSERRSNAGESARPVEKLDLNPPKGTRDVFPVDMRLRNWLFGHWRHVALSFGFEEYDAPVLENEALYVRKSGEEVTQQLYCFEDKGGRRVSLRPEMTPSLARMVMAKRKSLTFPVKWFSLPQCWRYERMTRGRRREHYQWNMDIWGVPGVEAEAELLGAMVAFFERVGLRAEDVGIKVNSRGVLTEVLQELGVPEEKHAATCVLVDKLDKVPLEAISDDLATLGLQESSVKRLLEVMEVGDIDGVQSVLGKESPAADELRRLFVLADSYGISDWLVLDCSVVRGLAYYTGTVFEAFDRRGTLRAICGGGRYDALLESFGGEPLPAAGFGFGDAVIMELLSDKGLLPEDQGPGFTAVVFGYNAELQGAATEVAGVLRRGGLSVDLVLEARKTKANFKHASRVGASHAVMVAPAEWKEGKASPTLRPER*KRQVSVKDLRTSEQSEVAV 1728
GGR +A+V L N S+ P LD NPPKGTRD +P DMRLR WLF WR VA +GF EYDAPVLE+E+LY RK+GEEVTQQLY F DKG R V+LRPEMTPSLARMVMAK+ L P+KWFS+PQCWRYERMTRGRRREHYQWNMDIWGV G+EAEAELL AMV FF+RVGL +EDVGIKVNSRGV+ EVL+ELGVPEEK AATCVLVDKL+KVPL+AI +L LGL++S++++L V+ I+ + +VL S A +L +LF L ++YGI+DW++ D SVVRGLAYYTG VFEAFDR+G LRAI GGGRYD LLE+FGGEP PAAGFGFGDAVI+ELL ++ +LP +G GF VVF + +L G A +VA LR+ G SVDL+LE +K K FKHASR A + V+VA E+K G +VSVKDL EQ V +
Sbjct: 48 GGRVAASVTDKDLLSKTTTDNNTNSSPPKVALDTNPPKGTRDFYPPDMRLRTWLFSQWRIVASLYGFSEYDAPVLESESLYTRKAGEEVTQQLYNFVDKGDRNVALRPEMTPSLARMVMAKKGGLPLPLKWFSIPQCWRYERMTRGRRREHYQWNMDIWGVDGIEAEAELLSAMVMFFKRVGLTSEDVGIKVNSRGVIGEVLKELGVPEEKFAATCVLVDKLEKVPLDAIQGELEELGLEKSTIEKLTSVLTNTSIESISAVLPPGSDAVKQLSQLFKLCEAYGIADWILFDASVVRGLAYYTGIVFEAFDRKGVLRAIAGGGRYDKLLETFGGEPTPAAGFGFGDAVIVELLKERDVLPSFEGSGFDTVVFAMSEDLFGVAVQVASTLRQNGQSVDLILENKKPKWVFKHASRNEAKYCVIVAGDEYKNG-------------EVSVKDLALGEQMSVKI 495
BLAST of mRNA_F-serratus_M_contig650.17491.1 vs. uniprot
Match: A0A6U3RP29_9STRA (Histidine--tRNA ligase n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3RP29_9STRA) HSP 1 Score: 553 bits (1425), Expect = 2.620e-190 Identity = 285/467 (61.03%), Postives = 347/467 (74.30%), Query Frame = 1
Query: 346 GGRGGGRTSAAVLQDSER-RSNAGESARPVEKLDLNPPKGTRDVFPVDMRLRNWLFGHWRHVALSFGFEEYDAPVLENEALYVRKSGEEVTQQLYCFEDKGGRRVSLRPEMTPSLARMVMAKRKSLTFPVKWFSLPQCWRYERMTRGRRREHYQWNMDIWGVPGVEAEAELLGAMVAFFERVGLRAEDVGIKVNSRGVLTEVLQELGVPEEKHAATCVLVDKLDKVPLEAISDDLATLGLQESSVKRLLEVMEVGDIDGVQSVLGKESPAADELRRLFVLADSYGISDWLVLDCSVVRGLAYYTGTVFEAFDRRGTLRAICGGGRYDALLESFGGEPLPAAGFGFGDAVIMELLSDKGLLPEDQGPGFTAVVFGYNAELQGAATEVAGVLRRGGLSVDLVLEARKTKANFKHASRVGASHAVMVAPAEWKEGKASPTLRPER*KRQVSVKDLRTSEQSEVAVADVAE 1743
G +GGGR SA V + +++ +S + ++LD NPPKGTRD +P DMRLR WLF HWR VA ++GF EYDAPVLE+EALY RK+GEEVTQQLY F DKG R V+LRPEMTPSLARMVMAK+ L P+KW S+PQCWRYERMTRGRRREH+QWNMD+WGV GVEAEAELL AMV FFE VGL ++DVGIKVNSR V+TEVL ELGVPE+K AATCVLVDKL+KVPL+AI DDL LGL+ V++LLEV+ ++ + SVLG ES A +L LF L ++YGI DW++LD SVVRGLAYYTG VFEAFDR+G LRAI GGGRYD LLE+FGG+P PAAGFGFGDAVI+ELL ++ +LP + VVF EL A VA LR+ G VD+VLE +K K FKHA R+ A + ++VAP E++ K++VSVK+L EQ+ V + +A+
Sbjct: 51 GNKGGGRVSAGVKDTNILDKTDTSKSMKKQKQLDTNPPKGTRDFYPEDMRLRTWLFDHWRSVASTYGFSEYDAPVLESEALYTRKAGEEVTQQLYNFMDKGDRAVALRPEMTPSLARMVMAKKGGLNLPLKWHSIPQCWRYERMTRGRRREHFQWNMDVWGVQGVEAEAELLSAMVTFFENVGLTSDDVGIKVNSRLVITEVLTELGVPEDKFAATCVLVDKLEKVPLDAIQDDLTELGLERDVVEKLLEVLTNNSLESLSSVLGAESNAVKQLTELFDLCEAYGIQDWVLLDASVVRGLAYYTGIVFEAFDRKGVLRAIAGGGRYDKLLETFGGDPTPAAGFGFGDAVIVELLKERNVLPSFESSDVDTVVFAMRPELYSVAINVASKLRKAGQKVDVVLEKKKPKWVFKHADRICAKYCLIVAPDEYE-------------KQEVSVKNLELGEQTTVKIDALAD 504
BLAST of mRNA_F-serratus_M_contig650.17491.1 vs. uniprot
Match: A0A6U3ZLG2_9STRA (Histidine--tRNA ligase n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A6U3ZLG2_9STRA) HSP 1 Score: 551 bits (1421), Expect = 1.210e-189 Identity = 275/430 (63.95%), Postives = 329/430 (76.51%), Query Frame = 1
Query: 439 LDLNPPKGTRDVFPVDMRLRNWLFGHWRHVALSFGFEEYDAPVLENEALYVRKSGEEVTQQLYCFEDKGGRRVSLRPEMTPSLARMVMAKRKSLTFPVKWFSLPQCWRYERMTRGRRREHYQWNMDIWGVPGVEAEAELLGAMVAFFERVGLRAEDVGIKVNSRGVLTEVLQELGVPEEKHAATCVLVDKLDKVPLEAISDDLATLGLQESSVKRLLEVMEVGDIDGVQSVLGKESPAADELRRLFVLADSYGISDWLVLDCSVVRGLAYYTGTVFEAFDRRGTLRAICGGGRYDALLESFGGEPLPAAGFGFGDAVIMELLSDKGLLPEDQGPGFTAVVFGYNAELQGAATEVAGVLRRGGLSVDLVLEARKTKANFKHASRVGASHAVMVAPAEWKEGKASPTLRPER*KRQVSVKDLRTSEQSEVAV 1728
LD NPPKGTRD +P DMRL++WLF WR VA ++GF EYDAPVLE+E+LY RK+GEEVTQQLY FEDKGGR V+LRPEMTPSLARMVMAK+ L P+KW+S+PQCWRYERMTRGRRREHYQWNMDIWGV G+EAEAELL AMV FF+ VGL A+DVGIKVNSR V+ EVL ELGVPEEK AATCVLVDKL+KVPL+AI +L LGL+ S +++L EV+ I+ + +VL +S A EL +LF L ++YGI DW++ D SVVRGLAYYTG VFEAFDR+G LRA+ GGGRYD LLE+FGGEP PAAGFGFGDAVI+ELL ++ +LP +G G+ +VVF + +L G A EVA LR G +VDL+LE +K K FKHASR A V+VA E++ G +VSVKDL EQ V +
Sbjct: 84 LDTNPPKGTRDFYPADMRLQSWLFNQWRQVAATYGFSEYDAPVLESESLYTRKAGEEVTQQLYNFEDKGGRNVALRPEMTPSLARMVMAKKGGLPLPLKWYSIPQCWRYERMTRGRRREHYQWNMDIWGVDGIEAEAELLSAMVMFFKNVGLTADDVGIKVNSRNVIGEVLTELGVPEEKFAATCVLVDKLEKVPLDAIQGELEELGLERSMIEKLTEVLTNTSIESISAVLPDDSKAVQELTKLFDLCNAYGIGDWIMFDASVVRGLAYYTGVVFEAFDRKGVLRAVAGGGRYDKLLETFGGEPTPAAGFGFGDAVIVELLKERNVLPSFEGSGYDSVVFAMSEDLYGVAIEVASKLRAAGQTVDLILEKKKPKWVFKHASRNDAKFCVIVAGNEYENG-------------EVSVKDLSAGEQKAVKI 500
BLAST of mRNA_F-serratus_M_contig650.17491.1 vs. uniprot
Match: A0A7S1BJC2_9STRA (Histidine--tRNA ligase n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BJC2_9STRA) HSP 1 Score: 551 bits (1420), Expect = 4.670e-189 Identity = 284/464 (61.21%), Postives = 341/464 (73.49%), Query Frame = 1
Query: 355 GGGRTSAAVLQDSERRSNAGESARPVEKLDLNPPKGTRDVFPVDMRLRNWLFGHWRHVALSFGFEEYDAPVLENEALYVRKSGEEVTQQLYCFEDKGGRRVSLRPEMTPSLARMVMAKRKSLTFPVKWFSLPQCWRYERMTRGRRREHYQWNMDIWGVPGVEAEAELLGAMVAFFERVGLRAEDVGIKVNSRGVLTEVLQELGVPEEKHAATCVLVDKLDKVPLEAISDDLATLGLQESSVKRLLEVMEVGDIDGVQSVLGKESPAADELRRLFVLADSYGISDWLVLDCSVVRGLAYYTGTVFEAFDRRGTLRAICGGGRYDALLESFGGEPLPAAGFGFGDAVIMELLSDKGLLPEDQGPGFT-AVVFGYNAELQGAATEVAGVLRRGGLSVDLVLEARKTKANFKHASRVGASHAVMVAPAEWKEGKASPTLRPER*KRQVSVKDLRTSEQSEVAVADVAE 1743
GGGR+SAAV + G+S++ +KLD NPPKGTRD +P DM LRN+LF +R A S GF EYDAPVLE+E LYVRK+GE+V+ QLY FEDKGGRRVSLRPEMTPSLARMVMA K + P+KWFS+PQCWRYERMTRGRRREHYQWN+DIWG+ GVEAEAELL MV FE +G+ AEDVGI++NSRGV+ EVL VPEEK AATCVLVDKLDK+P++AI D+ LGL S V+ L V+ +D + SVLG +S A +LRRLF LA++YGI++WL D SVVRGLAYYTGTVFEAFDR+G LRAI GGGRYD LLE+FGGE PA GFGFGDAVI+EL+ ++G+LP +G VVF N EL G A + A +R+ G+SVD+VLE +K K FKHA R+GA H V+VAP EW+ G +VS+KDL EQ V V + E
Sbjct: 86 GGGRSSAAVTDPNLASKTTGKSSQKNKKLDTNPPKGTRDFYPDDMLLRNYLFEKFRQAANSHGFREYDAPVLESEDLYVRKAGEDVSAQLYGFEDKGGRRVSLRPEMTPSLARMVMAGGKGIVMPLKWFSIPQCWRYERMTRGRRREHYQWNVDIWGIAGVEAEAELLATMVGLFESLGITAEDVGIRINSRGVIKEVLAGFDVPEEKFAATCVLVDKLDKMPIDAIQGDMEALGLARSVVENLTSVLTDASLDSMSSVLGPDSEALTDLRRLFALAEAYGITEWLAFDASVVRGLAYYTGTVFEAFDRKGELRAIAGGGRYDRLLETFGGESTPACGFGFGDAVIVELMKERGVLPSVEGQSVVDVVVFALNDELYGGAVKAAREIRKQGMSVDVVLEKKKMKWAFKHADRLGAKHVVVVAPDEWERG-------------EVSIKDLTKGEQILVKVEKLEE 536
BLAST of mRNA_F-serratus_M_contig650.17491.1 vs. uniprot
Match: L1K527_GUITC (Histidine--tRNA ligase n=2 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1K527_GUITC) HSP 1 Score: 548 bits (1413), Expect = 1.490e-188 Identity = 282/463 (60.91%), Postives = 337/463 (72.79%), Query Frame = 1
Query: 361 GRTSAAVLQDSERRSNAGESARPVEKLDLNPPKGTRDVFPVDMRLRNWLFGHWRHVALSFGFEEYDAPVLENEALYVRKSGEEVTQQLYCFEDKGGRRVSLRPEMTPSLARMVMAKRKSLTFPVKWFSLPQCWRYERMTRGRRREHYQWNMDIWGVPGVEAEAELLGAMVAFFERVGLRAEDVGIKVNSRGVLTEVLQELGVPEEKHAATCVLVDKLDKVPLEAISDDLATLGLQESSVKRLLEVMEVGDIDGVQSVLGKESPAADELRRLFVLADSYGISDWLVLDCSVVRGLAYYTGTVFEAFDRRGTLRAICGGGRYDALLESFGGEPLPAAGFGFGDAVIMELLSDKGLLPEDQGPGFTAVVFGYNAELQGAATEVAGVLRRGGLSVDLVLEARKTKANFKHASRVGASHAVMVAPAEWKEGKASPTLRPER*KRQVSVKDLRTSEQSEVAVADVAEHI 1749
GR SAAV Q E+ S EKLDL PPKGTRD +P DMR+RNWLFGHW+ VA GFEEYDAPVLE+E LY+RK+GEEVTQQLY FEDKG RRVSLRPEMTPSLARMVMA+ KSLT PVKWFS+PQCWRYERMTRGRRREHYQWNMDIWGVPG+EAEAELL A+V FF+RVG+ ++DVGIKVNSR VL+EVL +GVP +K AATCVLVDKL+KV L+ I ++ LGL + + +L+ + + D+D ++ LG S A +L++L A++YG DWL+ D SVVRGLAYYTG VFE FDR+G LRAICGGGRYD LL +FGGEPLPA GFGFGDAVI ELL D+ LLP VVF + + +A V+GV+R +S DLVLE +K K FKHA R+GASH V++ E +G V VK+L EQ EV V+ V++ I
Sbjct: 57 GRASAAVAQSKEK------STGKKEKLDLKPPKGTRDFYPEDMRMRNWLFGHWKDVARLHGFEEYDAPVLESEELYIRKAGEEVTQQLYNFEDKGERRVSLRPEMTPSLARMVMARGKSLTLPVKWFSIPQCWRYERMTRGRRREHYQWNMDIWGVPGIEAEAELLSAIVTFFKRVGITSQDVGIKVNSRAVLSEVLTAMGVPADKFAATCVLVDKLEKVKLDDIRGEMQELGLTDEIITKLVATLSIKDLDALEQTLGNGSKALAQLKQLMEYAEAYGFRDWLIFDASVVRGLAYYTGVVFEGFDRKGELRAICGGGRYDELLATFGGEPLPAVGFGFGDAVIAELLKDRNLLPNFDNNKVDVVVFPLSPSVYASAAAVSGVVRSKSISSDLVLEDKKMKWAFKHAERLGASHLVIIGEDEIAKGI-------------VQVKNLAKGEQVEVEVSKVSDFI 500
BLAST of mRNA_F-serratus_M_contig650.17491.1 vs. uniprot
Match: W7U324_9STRA (Histidine--tRNA ligase n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U324_9STRA) HSP 1 Score: 549 bits (1415), Expect = 3.630e-188 Identity = 293/461 (63.56%), Postives = 344/461 (74.62%), Query Frame = 1
Query: 358 GGRTSAAVLQDSERRSNAGESARPVE-KLDLNPPKGTRDVFPVDMRLRNWLFGHWRHVALSFGFEEYDAPVLENEALYVRKSGEEVTQQLYCFEDKGGRRVSLRPEMTPSLARMVMAKRKSLTFPVKWFSLPQCWRYERMTRGRRREHYQWNMDIWGVPGVEAEAELLGAMVAFFERVGLRAEDVGIKVNSRGVLTEVLQELGVPEEKHAATCVLVDKLDKVPLEAISDDLATLGLQESSVKRLLEVMEVGDIDGVQSVLGKESPAADELRRLFVLADSYGISDWLVLDCSVVRGLAYYTGTVFEAFDRRGTLRAICGGGRYDALLESFGGEPLPAAGFGFGDAVIMELLSDKGLLPEDQGPGFTAVVFGYNAELQGAATEVAGVLRRGGLSVDLVLEARKTKANFKHASRVGASHAVMVAPAEWKEGKASPTLRPER*KRQVSVKDLRTSEQSEVAVADV 1737
G R SAAV QD + N+ E+ + + KLDLNPP+GTRD +P DMR R+WLF WR VA FEEYDAPVLE+E L+VRK+GEEVT+QLY FEDKGGRRV+LRPEMTPSLARMVMAKR L PVKWFS PQCWRYERMTRGRRREHYQWNMD+WGV GVEAEAELL A+ FF+RVGL AEDVGIKV+SRGVL EVL L VP+ K +ATCVLVDKL+K+PLEAI DL LGL+ES V+RLL+V++ D +++ +G +S A +LR+LF A +Y +WLVLD SVVRGLAYYTG VFEAFDR+G LRAICGGGRYD LLE+FGGE LPA GFGFGDAVIMELL KGL+P G A+VF A LQG A A LR GL+VDL LEARKTK KHA R+GA++ V+V P E A +R VK++ T +Q VA+A++
Sbjct: 86 GSRGSAAVAQDLK---NSRETQKERQGKLDLNPPRGTRDFYPEDMRTRSWLFELWRQVARDHAFEEYDAPVLESEDLFVRKAGEEVTEQLYNFEDKGGRRVALRPEMTPSLARMVMAKRNGLVMPVKWFSFPQCWRYERMTRGRRREHYQWNMDVWGVSGVEAEAELLSAITTFFKRVGLTAEDVGIKVSSRGVLAEVLAALDVPDAKFSATCVLVDKLEKLPLEAIQGDLTALGLEESVVRRLLDVVQSRDFPSLETAIGAKSTALAQLRQLFEYARAYNFEEWLVLDASVVRGLAYYTGIVFEAFDRKGELRAICGGGRYDKLLETFGGEALPAVGFGFGDAVIMELLESKGLVPS-LSLGLDALVFAMEAGLQGIAIRAATSLRAAGLTVDLQLEARKTKWALKHADRLGATYVVIVGPEEV----AGCNVR---------VKEMATGQQHVVAIANL 529
BLAST of mRNA_F-serratus_M_contig650.17491.1 vs. uniprot
Match: A0A7S1J9P1_9EUGL (Histidine--tRNA ligase n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1J9P1_9EUGL) HSP 1 Score: 543 bits (1400), Expect = 5.140e-186 Identity = 278/461 (60.30%), Postives = 341/461 (73.97%), Query Frame = 1
Query: 361 GRTSAAVLQDSERRSNAGESARPVEKLDLNPPKGTRDVFPVDMRLRNWLFGHWRHVALSFGFEEYDAPVLENEALYVRKSGEEVTQQLYCFEDKGGRRVSLRPEMTPSLARMVMAKRKSLTFPVKWFSLPQCWRYERMTRGRRREHYQWNMDIWGVPGVEAEAELLGAMVAFFERVGLRAEDVGIKVNSRGVLTEVLQELGVPEEKHAATCVLVDKLDKVPLEAISDDLATLGLQESSVKRLLEVMEVGDIDGVQSVLGKESPAADELRRLFVLADSYGISDWLVLDCSVVRGLAYYTGTVFEAFDRRGTLRAICGGGRYDALLESFGGEPLPAAGFGFGDAVIMELLSDKGLLPEDQGPGFTAVVFGYNAELQGAATEVAGVLRRGGLSVDLVLEA-RKTKANFKHASRVGASHAVMVAPAEWKEGKASPTLRPER*KRQVSVKDLRTSEQSEVAVADVA 1740
GR SAAV+QD +++ K DL PPKGTRD +P DMRL++WLFGH+R VA FGFEEYDAPVLENE LY+RK+GEEV+QQLY FEDKGGRRV+LRPEMTPSLARMV+AKRK L +KW+SLPQCWRYERMTRGRRREHYQWNMDIWGV GVEAE E L AMV +GL ++DVGIK+NSR +LTE++ +G+PEEK A TCVLVDKL+KVPL+A+S D+ LGL + +V LLE ++ ++ ++ LG +SP +++++F +A+SYG DWLV D SVVRGLAYYTGTVFE FDR G LRAICGGGRYD LLE+ GGEP+PA GFGFGDAVI+ELL KGLLP+ VVF N +L+G A EVA LR GL VD+VLE +KTK FK+A R+ A+ V++AP E + G +V VK+L+ EQS V ++ VA
Sbjct: 95 GRQSAAVVQDKSKKAQT--------KFDLQPPKGTRDFYPEDMRLQSWLFGHFRRVAAEFGFEEYDAPVLENEDLYIRKAGEEVSQQLYNFEDKGGRRVALRPEMTPSLARMVLAKRKQLPGVLKWYSLPQCWRYERMTRGRRREHYQWNMDIWGVEGVEAEGEALAAMVKVMSDMGLTSQDVGIKINSRKILTELMAAVGIPEEKFAPTCVLVDKLEKVPLDALSKDMEELGLAKETVASLLEAIQGATVESFEARLGADSPGVMDIKQIFAMAESYGYQDWLVFDASVVRGLAYYTGTVFEGFDRTGELRAICGGGRYDKLLETLGGEPMPAVGFGFGDAVIVELLKVKGLLPDTTTSNVQVVVFPMNGDLRGKALEVASALRNEGLRVDMVLETGKKTKWAFKYADRLAANCLVLLAPDEVERG-------------EVVVKNLKVGEQSVVPISAVA 534
BLAST of mRNA_F-serratus_M_contig650.17491.1 vs. uniprot
Match: K0TP21_THAOC (Histidine--tRNA ligase n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TP21_THAOC) HSP 1 Score: 542 bits (1397), Expect = 7.360e-186 Identity = 284/476 (59.66%), Postives = 343/476 (72.06%), Query Frame = 1
Query: 361 GRTSAAVL-QDSERRSNAGESARPVEKLDLNPPKGTRDVFPVDMRLRNWLFGHWRHVALSFGFEEYDAPVLENEALYVRKSGEEVTQQLYCFEDKGGRRVSLRPEMTPSLARMVMAKRKSLTFPVKWFSLPQCWRYERMTRGRRREHYQWNMDIWGVPGVEAEAELLGAMVAFFERVGLRAEDVGIKVNSRGVLTEVLQELGVPEEKHAATCVLVDKLDKV-------------------PLEAISDDLATLGLQESSVKRLLEVMEVGDIDGVQSVLGKESPAADELRRLFVLADSYGISDWLVLDCSVVRGLAYYTGTVFEAFDRRGTLRAICGGGRYDALLESFGGEPLPAAGFGFGDAVIMELLSDKGLLPEDQGPGFTAVVFGYNAELQGAATEVAGVLRRGGLSVDLVLEARKTKANFKHASRVGASHAVMVAPAEWKEGKASPTLRPER*KRQVSVKDLRTSEQSEVAV 1728
GR+SAAV +D ++ + ++ R LD NPPKGTRD +P DMRLR WLF WR VA +GF EYDAPVLE+E+LY RK+GEEVTQQLY F DKG R V+LRPEMTPSLARMVMAK+ L P+KWFS+PQCWRYERMTRGRRREH+QWNMDIWGV G+EAEAELL AMV FF+ VGL +EDVGIK+NSRGV+ EVL ELGVPEEK AATCVLVDKL+KV P+ AI +L LGL+ S++++L +V+ I+ + +VL K+S A EL +LF L +YGI DW++ D SVVRGLAYYTG VFEAFDR+G LRAI GGGRYD LLE+FGG+P PAAGFGFGDAVI+ELL ++ +LP +G G+ VVF N++L G A VA LR G SVDL+LEA+KTK FKHASR A H V+VA E++ G +VS+KDL EQ V +
Sbjct: 50 GRSSAAVADKDLLSKTGSEKNNRAKVALDTNPPKGTRDFYPPDMRLRTWLFNQWRDVAALYGFSEYDAPVLESESLYTRKAGEEVTQQLYNFVDKGDRAVALRPEMTPSLARMVMAKKGGLNLPLKWFSIPQCWRYERMTRGRRREHFQWNMDIWGVNGIEAEAELLSAMVTFFKNVGLTSEDVGIKLNSRGVIGEVLTELGVPEEKFAATCVLVDKLEKVRRYFTDVICCRHSQEKFKVPIAAIQGELEELGLETSTIEKLTDVLTNTSIESISAVLPKDSVAVKELTQLFELCKAYGIEDWVMFDASVVRGLAYYTGVVFEAFDRKGVLRAIAGGGRYDKLLETFGGDPTPAAGFGFGDAVIVELLKERDVLPTFEGSGYDTVVFAMNSDLYGVAINVASTLRAEGQSVDLILEAKKTKWVFKHASRNEAKHCVIVAGNEYENG-------------EVSIKDLSIGEQKTVKI 512 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig650.17491.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig650.17491.1 >prot_F-serratus_M_contig650.17491.1 ID=prot_F-serratus_M_contig650.17491.1|Name=mRNA_F-serratus_M_contig650.17491.1|organism=Fucus serratus male|type=polypeptide|length=548bp MRLKVQMLMSVISGGIEPAVVRAFIPSLSATMASSGVRLLSLSSMIQPTAback to top mRNA from alignment at F-serratus_M_contig650:139724..147571- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig650.17491.1 ID=mRNA_F-serratus_M_contig650.17491.1|Name=mRNA_F-serratus_M_contig650.17491.1|organism=Fucus serratus male|type=mRNA|length=7848bp|location=Sequence derived from alignment at F-serratus_M_contig650:139724..147571- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig650:139724..147571- >mRNA_F-serratus_M_contig650.17491.1 ID=mRNA_F-serratus_M_contig650.17491.1|Name=mRNA_F-serratus_M_contig650.17491.1|organism=Fucus serratus male|type=CDS|length=3288bp|location=Sequence derived from alignment at F-serratus_M_contig650:139724..147571- (Fucus serratus male)back to top |