mRNA_F-serratus_M_contig65.17482.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig65.17482.1 vs. uniprot
Match: A0A6H5KBU0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBU0_9PHAE) HSP 1 Score: 394 bits (1011), Expect = 1.750e-127 Identity = 202/322 (62.73%), Postives = 241/322 (74.84%), Query Frame = 2
Query: 236 MDVLSGGGDGGDRPLRLSAPSRQKRHYVKRRASLSMLPLSDTFLFKAPQPTQ------------GSSVCLALERLGGASRVVLFCHGTSSDLGMSRRSLETMRDGLESHVVAVEYPGYGLTAKDEPSEDSVNAAVRGVFIHLTEAMGWPAERVVVMGRSLGSGPATRLAREFQPGALFLLAPFTSVKAIAGSILGATLASVFNLNQWQNKEEVEATTCPTILIHGLRDTVVPHTHSLELYRASPAKQKYVGLLKDSDHNRINWHAACDVYARPFIDTACPPETYSDRTLGVLPADVVKLSDYEPTSNGRLLVACAEAAWERR 1165
M++LSG RP P R+ Y +R+AS S+ P SD FLF+ P+PT GSSVCLALER GGAS+V+LFCHGTSSDLGM+RRSLET+ D L+ HV+ VEYPGYGL DE +E SVNAAVR F+H+TE MGWPA+RVVVMGRSLGSGPA LAREFQPGALFLLAPFT V +A SI+G TLAS+FNLNQW NK+ V TTCPT+++HGL+D VVPHTHSLELYRAS A KYV LL DSDHNRI W AC++YA+PF++ ACP ET R LG+ P DV KLS+++P+ L++ACA+AAW RR
Sbjct: 1 MEILSGRASDRPRP----PPGRR---YFQRQASFSLSP-SDMFLFRPPKPTYVATSWPGELCVLGSSVCLALERNGGASKVLLFCHGTSSDLGMTRRSLETLGDMLDCHVIGVEYPGYGLMTHDESNEQSVNAAVRVAFLHMTEVMGWPADRVVVMGRSLGSGPAACLAREFQPGALFLLAPFTGVGDMAESIVGGTLASMFNLNQWDNKKAVAETTCPTLVLHGLKDQVVPHTHSLELYRASAATTKYVALLFDSDHNRIGWRVACELYAKPFMEMACPAET--KRALGIRPMDVAKLSNFDPSGKATLILACAKAAWARR 312
BLAST of mRNA_F-serratus_M_contig65.17482.1 vs. uniprot
Match: D8LMJ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMJ7_ECTSI) HSP 1 Score: 306 bits (785), Expect = 6.960e-98 Identity = 160/249 (64.26%), Postives = 188/249 (75.50%), Query Frame = 2
Query: 236 MDVLSGGGDGGDRPLRLSAPSRQKRHYVKRRASLSMLPLSDTFLFKAPQPTQ------------GSSVCLALERLGGASRVVLFCHGTSSDLGMSRRSLETMRDGLESHVVAVEYPGYGLTAKDEPSEDSVNAAVRGVFIHLTEAMGWPAERVVVMGRSLGSGPATRLAREFQPGALFLLAPFTSVKAIAGSILGATLASVFNLNQWQNKEEVEATTCPTILIHGLRDTVVPHTHSLELYRASPAKQKY 946
M++LSG RP P R+ Y +R+ S S+ P SD FLF+ P+PT GSSVCLALER+GGAS+V+LFCHGTSSDLGM+RRSLET+ D L+ HV+ VEYPGYGL A DE +E SVNAAVR F+H+TE MGWPA+RVVVMGRSLGSGPA LAREFQPGALFLLAPFT V +A SI+G TLAS+FNLNQW NK+ V TTCPT+++HGL+D VVPHTHSL+LYRAS A KY
Sbjct: 1 MEILSGRASDRPRP----PPGRR---YFQRQTSFSLSP-SDMFLFRPPKPTYVATSWPGELCVLGSSVCLALERIGGASKVLLFCHGTSSDLGMTRRSLETLGDMLDCHVIGVEYPGYGLMAHDESNEQSVNAAVRVAFLHITEVMGWPADRVVVMGRSLGSGPAACLAREFQPGALFLLAPFTGVGDMAESIVGGTLASMFNLNQWDNKKAVAETTCPTLVLHGLKDQVVPHTHSLDLYRASAATTKY 241
BLAST of mRNA_F-serratus_M_contig65.17482.1 vs. uniprot
Match: A0A7S3UX78_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UX78_HETAK) HSP 1 Score: 166 bits (420), Expect = 4.700e-42 Identity = 82/222 (36.94%), Postives = 125/222 (56.31%), Query Frame = 2
Query: 362 FLFKAPQPTQGSSV------------CLALERLGGASRVVLFCHGTSSDLGMSRRSLETMRDGLESHVVAVEYPGYGLT-AKDEPSEDSVNAAVRGVFIHLTEAMGWPAERVVVMGRSLGSGPATRLAREFQPGALFLLAPFTSVKAIAGSILGATLASVFNLNQWQNKEEVEATTCPTILIHGLRDTVVPHTHSLELYRASPAKQKYVGLLKDSDHNRINW 988
F F+ P P+ + CL L + S ++L+CH S+D+G R+ L+ +R L HV+ VEYPGYG T + +PSED++N +V V+ + + M WP E ++V+GRS+GSGPAT+LARE G L L++ F S+ +IA +GA +A++ NQ+ N + CP + +HG D VP H +LY A + +K + L HN +W
Sbjct: 4 FFFRPPSPSYDRNSFGGELCSLNGIDCLTLASVEHCSHIILYCHANSTDIGHCRKHLQALRSLLGVHVIGVEYPGYGTTYSSGKPSEDNINESVLKVYNFICKQMHWPPENIIVVGRSIGSGPATKLAREVPLGGLILISAFKSITSIARKFVGAGIANLVIANQYDNLTAIRQVHCPVLFLHGSEDDFVPFQHCQDLYNACASSRKTLAPLLGYGHNHFDW 225
BLAST of mRNA_F-serratus_M_contig65.17482.1 vs. uniprot
Match: A0A7S3XMG0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XMG0_HETAK) HSP 1 Score: 154 bits (389), Expect = 2.790e-38 Identity = 74/203 (36.45%), Postives = 122/203 (60.10%), Query Frame = 2
Query: 392 GSSVCLALERLGGASRVVLFCHGTSSDLGMSRRSLETMRDGLESHVVAVEYPGYGLTAKDEPSEDSVNAAVRGVFIHLTEAMGWPAERVVVMGRSLGSGPATRLAREFQPGALFLLAPFTSVKAIAGSILG----ATLASVFNLNQWQNKEEVEATTCPTILIHGLRDTVVPHTHSLELYRASPAKQKYVGLLKDSDHNRINW 988
G CL +E +S +++ CHG ++D+G R +LE + D L ++VAVEYPGYG + ++PS+ ++ +V V+ +L +GWPA ++VMGRS+GSGPAT LA +PGAL L++ F+S++ + +G + VF +N W N E++ CP +L+HG +D ++P +HS +L+ K + L + H+ W
Sbjct: 23 GDVPCLIIESKTPSSIIMIHCHGNATDVGRIRETLELLADQLGVNIVAVEYPGYGCRSDEKPSKAGLDVSVLKVYSYLRNEVGWPACNILVMGRSIGSGPATSLASHNRPGALILVSLFSSIEDLIEQRVGHRATRVVTDVFRVNGWNNLEQISQVECPVLLLHGSQDKIIPCSHSTKLFHL--CKNGRISYLPRTGHSGFRW 223
BLAST of mRNA_F-serratus_M_contig65.17482.1 vs. uniprot
Match: A0A7S3N3T1_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidium inclinatum TaxID=197538 RepID=A0A7S3N3T1_9SPIT) HSP 1 Score: 146 bits (369), Expect = 1.260e-34 Identity = 80/234 (34.19%), Postives = 131/234 (55.98%), Query Frame = 2
Query: 287 SAPSRQKRHYVKRRASLSMLPLSDTFLFKAPQPTQGSSV-CLALERLGGASRVVLFCHGTSSDLGMSRRSLETMRDGLESHVVAVEYPGYGLTAKDEPSEDSVNAAVRGVFIHLTEAMGWPAERVVVMGRSLGSGPATRLAREFQPGALFLLAPFTSVKAIAGSILG-ATLASVFNLNQWQNKEEVEATTCPTILIHGLRDTVVPHTHSLELYRASPAKQKYVGLLKDSDHNRI 982
S PS + H +R ASL + P+ + CL L G ++VV++ HG + D+G++ L +E HV+AVEYPGYGL +P+ED + A ++ +L +G +++ GRS+GSGP + L+ P AL L++P+TS+K A S+LG A+ SV ++++N + ++ CP +HG +DT++PH HS +L+ A P ++ Y+ L + DHN
Sbjct: 111 SGPSGSQTHRSERGASLLQEGKQPHDIKAPPKKKLIEHIPCLYLPYEEGGNKVVIYFHGNAEDIGLAFDLLYLFGQRMEMHVLAVEYPGYGLYKTSKPNEDQIKADSEAIYDYLVNCVGLNENDIILFGRSMGSGPTSYLSSVRNPYALLLMSPYTSIKEAAKSLLGWASFLSVIVYDKFRNIDMIKKARCPVFFLHGQQDTLIPHQHSEDLHAACP-RESYLHLPEKMDHNEF 343
BLAST of mRNA_F-serratus_M_contig65.17482.1 vs. uniprot
Match: A0A7S2XC84_9EUKA (Hypothetical protein n=2 Tax=Lotharella TaxID=74819 RepID=A0A7S2XC84_9EUKA) HSP 1 Score: 142 bits (358), Expect = 1.270e-33 Identity = 71/191 (37.17%), Postives = 114/191 (59.69%), Query Frame = 2
Query: 428 GASRVVLFCHGTSSDLGMSRRSLETMRDGLESHVVAVEYPGYGLTAKDEPSEDSVNAAVRGVFIHLTEAMGWPAERVVVMGRSLGSGPATRLAREFQP-----GALFLLAPFTSVKAIAGSILGATLASVFNLNQWQNKEEVEATTCPTILIHGLRDTVVPHTHSLELYRASPAKQKYVGLLKDSDHNRIN 985
GA R+V++CHG DLG L R+ + HV+A+EYPGYGL P E S+NAA V+ ++T+ + WP+ + GRS+GSGP +L + Q G + L +TS++A+ +G +AS ++WQN +EV+ CP +LIHG +D ++P+THS +LY ++ K + ++ ++DHN +
Sbjct: 52 GAKRMVIYCHGNGCDLGTIYDELLRYREYWQVHVLAMEYPGYGLCT-GTPDEASINAATLSVYNYVTKQLRWPSLFIFFYGRSIGSGPVCKLVADLQERGTRVGGIILHCGYTSIRAVVSHSIGL-VASALIKDRWQNIKEVKKIDCPVLLIHGQQDKLIPYTHSEQLYDTCKSQHKQLVIVAEADHNTFD 240
BLAST of mRNA_F-serratus_M_contig65.17482.1 vs. uniprot
Match: J9G921_9SPIT (Hydrolase of the alpha/beta superfamily n=1 Tax=Oxytricha trifallax TaxID=1172189 RepID=J9G921_9SPIT) HSP 1 Score: 140 bits (352), Expect = 1.580e-33 Identity = 72/206 (34.95%), Postives = 127/206 (61.65%), Query Frame = 2
Query: 404 CLALERLGGASRVVLFCHGTSSDLGMSRRSLETMRDGLESHVVAVEYPGYGLTAKDEPSEDSVNAAVRGVFIHLTEAMGWPAERVVVMGRSLGSGPATRLAREFQPGALFLLAPFTSVKAIAGSILGATLASVFNLNQWQNKEEVEATTCPTILIHGLRDTVVPHTHSLELYRASPAKQKYVGLLKDSDHNRINWHAACDVYARPF 1021
CL L L G+++++++ HG + DLG++ L+ +++ L+ HV+A+EYPGYG+ +PS +++ V+ +LT+ MG + +++ GRSLG+GPAT LA QP AL L+ + S++++ +I G TLAS +++N + ++ CPT LIHG +D+++P HS +L+ + L D DHN +++ D ++PF
Sbjct: 54 CLYLPYLQGSNKLIIYFHGNAEDLGLAYELLDHLKNSLKVHVLAIEYPGYGIYP-GKPSAEAILEDALVVWDYLTQVMGLSNKDIILFGRSLGTGPATELAAYVQPCALLLMTAYLSIRSVVRNIAG-TLASYLVHERFRNIDNIQEVKCPTFLIHGQKDSLIPSDHSQQLHSLCGGAASLL-LSNDMDHNEFDFY---DDLSQPF 253
BLAST of mRNA_F-serratus_M_contig65.17482.1 vs. uniprot
Match: A0A7S0DSL2_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DSL2_9EUKA) HSP 1 Score: 139 bits (350), Expect = 2.390e-32 Identity = 75/200 (37.50%), Postives = 118/200 (59.00%), Query Frame = 2
Query: 404 CLALERLGGASRVVLFCHGTSSDLGMSRRSLETMRDGLESHVVAVEYPGYGLTAKDEPSEDSVNAAVRGVFIHLTEAMGWPAERVVVMGRSLGSGPATRLAR------EFQPGALFLLAPFTSVKAIAGSILGATLASVFNLNQWQNKEEVEATTCPTILIHGLRDTVVPHTHSLELYRASPAKQKYVGLLKDSDHNRIN 985
C+ L GG R+V++CHG DLG L RD + H++A+EYPGYGL + PSE S+N A+ V+ +T + WP+ V + GRS+G+GPA LAR + G + L +TS++A+ +G TLAS ++WQN + ++ CP +LIHG D ++P+ HS +LY A ++ K + ++ ++DHN +
Sbjct: 43 CVFLAYKGG-KRLVIYCHGNGCDLGKIHDELLRYRDYWKVHILAMEYPGYGL-CEGTPSEASINRALYSVYDFVTRKLHWPSLFVFLYGRSIGTGPACHLARYCNKSPSTRVGGIILQCGYTSIRAVVAKSIG-TLASNLITDRWQNIKAMKYIDCPVLLIHGQGDKLIPYEHSEKLYDACKSQHKQLIVVAEADHNTFD 239
BLAST of mRNA_F-serratus_M_contig65.17482.1 vs. uniprot
Match: A0A8J8NN89_HALGN (Uncharacterized protein n=2 Tax=Halteria grandinella TaxID=5974 RepID=A0A8J8NN89_HALGN) HSP 1 Score: 138 bits (348), Expect = 2.750e-32 Identity = 76/226 (33.63%), Postives = 123/226 (54.42%), Query Frame = 2
Query: 425 GGASRVVLFCHGTSSDLGMSRRSLETMRDGLESHVVAVEYPGYGLTAKDEPSEDSVNAAVRGVFIHLTEAMGWPAERVVVMGRSLGSGPATRLAREFQPGALFLLAPFTSVKAIAGSILGATLASVFNLNQWQNKEEVEATTCPTILIHGLRDTVVPHTHSLELYRASPAKQKYVGLLKDSDHNRINWHA-----------ACDVYARPFIDTACPPETYSDRTLG 1069
GG+++++++ HG + DLG+S L+ +R L+ HV+AVEYPGYG+ P+ + + V+ +LT +G +++ GRSLGSGPA LA P AL L+ + S++ + S+ G A + + +++N E ++ CPT LIHG RDT++P +HS EL+ A + L D DHN +++ C + + P T PE+ S LG
Sbjct: 135 GGSTKLMIYFHGNAEDLGLSWELLDHLRSSLKMHVLAVEYPGYGIYP-GVPTAEKILEDALSVWEYLTLELGVKRTEIILFGRSLGSGPAIELAAHVNPCALLLMTAYLSIREVVRSLAGGMAAYLVH-KRFRNIENIKEVGCPTFLIHGQRDTLIPASHSQELHSACGGPASLL-LSNDMDHNEFDFYEDLSHPFNFFLQQCGISSNPTTQTQQSPESVSPAMLG 357
BLAST of mRNA_F-serratus_M_contig65.17482.1 vs. uniprot
Match: A0A815DS09_9BILA (Hypothetical protein n=3 Tax=Rotaria sp. Silwood1 TaxID=2762511 RepID=A0A815DS09_9BILA) HSP 1 Score: 134 bits (337), Expect = 6.620e-32 Identity = 66/200 (33.00%), Postives = 114/200 (57.00%), Query Frame = 2
Query: 392 GSSV-CLALERLGGASRVVLFCHGTSSDLGMSRRSLETMRDGLESHVVAVEYPGYGLTAKD-EPSEDSVNAAVRGVFIHLTEAMGWPAERVVVMGRSLGSGPATRLAREFQPGALFLLAPFTSVKAIAGSILGATLASVFNLNQWQNKEEVEATTCPTILIHGLRDTVVPHTHSLELYRA-SPAKQKYVGLLKDSDHNRI 982
GS + C+ +G A+ V++CHG D+G ++ T+ +++HV+A EYP YGL + EP+E+++N + + + + WP++R+++ G S+GSGPA LA G L L +P+ S+ + + + +F++ W N E ++ CP + IHG RD ++P HS LY + + ++K + LL D DHN I
Sbjct: 37 GSQIPCMLYSPIGEANFFVIWCHGNGDDIGSIDMAMNTLSQRIQAHVMAFEYPSYGLCKRSIEPTEETINNHAERAYSFVRDTLRWPSDRILIYGHSIGSGPACHLAATKAVGGLILKSPYKSLSHLIQEKIWI-FSKLFSIPNWNNLEAIKHIRCPILFIHGQRDNLIPFHHSKALYNSLNHNEKKRLVLLPDDDHNSI 235 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig65.17482.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig65.17482.1 >prot_F-serratus_M_contig65.17482.1 ID=prot_F-serratus_M_contig65.17482.1|Name=mRNA_F-serratus_M_contig65.17482.1|organism=Fucus serratus male|type=polypeptide|length=494bp MDVLSGGGDGGDRPLRLSAPSRQKRHYVKRRASLSMLPLSDTFLFKAPQPback to top mRNA from alignment at F-serratus_M_contig65:814734..825673+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig65.17482.1 ID=mRNA_F-serratus_M_contig65.17482.1|Name=mRNA_F-serratus_M_contig65.17482.1|organism=Fucus serratus male|type=mRNA|length=10940bp|location=Sequence derived from alignment at F-serratus_M_contig65:814734..825673+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig65:814734..825673+ >mRNA_F-serratus_M_contig65.17482.1 ID=mRNA_F-serratus_M_contig65.17482.1|Name=mRNA_F-serratus_M_contig65.17482.1|organism=Fucus serratus male|type=CDS|length=2964bp|location=Sequence derived from alignment at F-serratus_M_contig65:814734..825673+ (Fucus serratus male)back to top |