prot_F-serratus_M_contig65.17468.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig65.17468.1
Unique Nameprot_F-serratus_M_contig65.17468.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length180
Homology
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BLAST of mRNA_F-serratus_M_contig65.17468.1 vs. uniprot
Match: D8LMK0_ECTSI (DUF547 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMK0_ECTSI)

HSP 1 Score: 96.7 bits (239), Expect = 5.880e-20
Identity = 55/83 (66.27%), Postives = 65/83 (78.31%), Query Frame = 0 
Query:    2 SAEFSPRLAHREVKRRKLDALLQVLTAPSRAHLNSSHQVLVRAVLGMESSADRAFRSYNPTMTSEEARAYPTADDAGSRVEGG 84
            S E+SPRL+ +EVKRRK+DA+LQ+LTAPSRAH N +HQV+VRAVLGMESSADRA+RSYNP      A A  TA  A S  +GG
Sbjct: 1099 SMEYSPRLSRQEVKRRKMDAVLQLLTAPSRAHANRAHQVVVRAVLGMESSADRAYRSYNPV-----AAATATAP-AASSADGG 1175
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig65.17468.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LMK0_ECTSI5.880e-2066.27DUF547 domain-containing protein n=1 Tax=Ectocarpu... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig65contigF-serratus_M_contig65:376184..378255 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig65.17468.1mRNA_F-serratus_M_contig65.17468.1Fucus serratus malemRNAF-serratus_M_contig65 376184..378256 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig65.17468.1 ID=prot_F-serratus_M_contig65.17468.1|Name=mRNA_F-serratus_M_contig65.17468.1|organism=Fucus serratus male|type=polypeptide|length=180bp
RSAEFSPRLAHREVKRRKLDALLQVLTAPSRAHLNSSHQVLVRAVLGMES
SADRAFRSYNPTMTSEEARAYPTADDAGSRVEGGSDERASPTPDTEDQKT
LEPKQKRGAGNFTPRVSIDQALSPTGRKVGPFTAPEAVAFIDSPSRDSSD
RSGQGEASKGSAGGGRTLRRPSRRWASKYV
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