prot_F-serratus_M_contig649.17433.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig649.17433.1
Unique Nameprot_F-serratus_M_contig649.17433.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length158
Homology
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BLAST of mRNA_F-serratus_M_contig649.17433.1 vs. uniprot
Match: D8LQ94_ECTSI (Rab-GAP TBC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ94_ECTSI)

HSP 1 Score: 114 bits (284), Expect = 2.470e-26
Identity = 82/164 (50.00%), Postives = 90/164 (54.88%), Query Frame = 0 
Query:    1 MVGGLVQEMSGELVINIHAALSSDGSSPQPRHRRSTSALPPVTATSNPASFGIQFPSTPGGRPSTPLTSPRSPFPEWAANIFRSSTGG----GGGPIDVEGVTAAANMTMPVGVTTAAV---REXXXXXXRPPISPRFGNDNGASVRGDGRARSFRRAASSSWW 157
            M  GLV+EM+GE V      + S      PRHRRS S L PV ATS   +FGIQFPSTPG RP TPLTSPRSPFPEWAANIFRSSTGG    GGG              +P  V   +V   R        PP SPRF   +        R R  RRAAS+SWW
Sbjct: 1048 MAAGLVEEMTGEPVYLPPPEVLSP-----PRHRRSPSGLAPVAATST--AFGIQFPSTPG-RPPTPLTSPRSPFPEWAANIFRSSTGGPNEDGGG--------------VPASVDVGSVNGGRGGGGGDNLPPTSPRFSTPS--------RQRQLRRAASTSWW 1181
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig649.17433.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LQ94_ECTSI2.470e-2650.00Rab-GAP TBC domain-containing protein n=2 Tax=Ecto... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig649contigF-serratus_M_contig649:18383..19258 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig649.17433.1mRNA_F-serratus_M_contig649.17433.1Fucus serratus malemRNAF-serratus_M_contig649 18304..19426 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig649.17433.1 ID=prot_F-serratus_M_contig649.17433.1|Name=mRNA_F-serratus_M_contig649.17433.1|organism=Fucus serratus male|type=polypeptide|length=158bp
MVGGLVQEMSGELVINIHAALSSDGSSPQPRHRRSTSALPPVTATSNPAS
FGIQFPSTPGGRPSTPLTSPRSPFPEWAANIFRSSTGGGGGPIDVEGVTA
AANMTMPVGVTTAAVREKERERERPPISPRFGNDNGASVRGDGRARSFRR
AASSSWW*
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