mRNA_F-serratus_M_contig649.17436.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig649.17436.1
Unique NamemRNA_F-serratus_M_contig649.17436.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig649.17436.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig649contigF-serratus_M_contig649:68667..70732 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons4
Model size1690
Cds size1686
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig649.17436.1prot_F-serratus_M_contig649.17436.1Fucus serratus malepolypeptideF-serratus_M_contig649 68669..70732 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931998.227151-CDS-F-serratus_M_contig649:68668..689461622931998.227151-CDS-F-serratus_M_contig649:68668..68946Fucus serratus maleCDSF-serratus_M_contig649 68669..68946 -
1690964095.1992505-CDS-F-serratus_M_contig649:68668..689461690964095.1992505-CDS-F-serratus_M_contig649:68668..68946Fucus serratus maleCDSF-serratus_M_contig649 68669..68946 -
1622931998.2442658-CDS-F-serratus_M_contig649:69062..697341622931998.2442658-CDS-F-serratus_M_contig649:69062..69734Fucus serratus maleCDSF-serratus_M_contig649 69063..69734 -
1690964095.2106302-CDS-F-serratus_M_contig649:69062..697341690964095.2106302-CDS-F-serratus_M_contig649:69062..69734Fucus serratus maleCDSF-serratus_M_contig649 69063..69734 -
1622931998.2590334-CDS-F-serratus_M_contig649:69868..705251622931998.2590334-CDS-F-serratus_M_contig649:69868..70525Fucus serratus maleCDSF-serratus_M_contig649 69869..70525 -
1690964095.2220423-CDS-F-serratus_M_contig649:69868..705251690964095.2220423-CDS-F-serratus_M_contig649:69868..70525Fucus serratus maleCDSF-serratus_M_contig649 69869..70525 -
1622931998.27699-CDS-F-serratus_M_contig649:70653..707321622931998.27699-CDS-F-serratus_M_contig649:70653..70732Fucus serratus maleCDSF-serratus_M_contig649 70654..70732 -
1690964095.2389307-CDS-F-serratus_M_contig649:70653..707321690964095.2389307-CDS-F-serratus_M_contig649:70653..70732Fucus serratus maleCDSF-serratus_M_contig649 70654..70732 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig649.17436.1

>prot_F-serratus_M_contig649.17436.1 ID=prot_F-serratus_M_contig649.17436.1|Name=mRNA_F-serratus_M_contig649.17436.1|organism=Fucus serratus male|type=polypeptide|length=562bp
DTETEHTTDAFAEEIPTPSQPDMASAGPTEDPTMAESVVESEKPTVEAVG
DVVPDVANVVLEALAAETTNEKLVEGAVVEAFASMQPEPLAADEAPAQES
EATMPPDVTTAPVPMSEAVTEEPVAEEVESPIDVAQPVDSSCDIVLPTVD
VTADESTPVVGSSTDVLAEEDEAGSIAPEEENQPDETTKEIRMANIPAGG
ESSTDGEAPVTPDIAEVTKDTKMEHSTGASAEEIPTPSQSDMTIVGPAEE
TAMAEPIVVPEEPTVEAVSDAVPDDTDAVSETLAVESASEKLAEDPAEKT
APSEQSESPAGEEAPAEESETIMPSDVTTAPMPISETVTEEPEAEEVELP
TNVAQPVGSSRDIVLPTVDVTANESTPEVESPSDVPAEEDEARPTAPEEE
TQADEKPKEIQMVDTPAAAEPSTDDEVPVAPDVAEVAEDKETEHTMDDPA
EEIPAPSHPNIASTDGCKFGSAEEPAMAELVVAPEEPMAEAAGDDVPDAT
DAVPETLAPETTDEKLVEHAAGKAFASKRPEPPAAEEAPAEESEEIMPPD
VTAALASISQAV
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mRNA from alignment at F-serratus_M_contig649:68667..70732-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig649.17436.1 ID=mRNA_F-serratus_M_contig649.17436.1|Name=mRNA_F-serratus_M_contig649.17436.1|organism=Fucus serratus male|type=mRNA|length=2066bp|location=Sequence derived from alignment at F-serratus_M_contig649:68667..70732- (Fucus serratus male)
GACACGGAGACGGAGCACACGACGGATGCTTTTGCAGAGGAGATTCCCAC
GCCTTCTCAGCCAGACATGGCTAGTGCCGGTGGGTATAGTTTCCATAGAA
AGGAGTAAATACTGATAGGGATTGTATTGGTTAGCGTACAATTTTATTCC
GTCTCCAAGAGTGAGATCATCGTTCGAGCTTTAAACCTGCTACGTCCGTT
ATTTCAGGTCCGACAGAAGACCCAACAATGGCAGAGTCTGTCGTCGAATC
CGAGAAACCCACGGTGGAAGCTGTGGGTGACGTCGTACCTGACGTTGCCA
ACGTCGTTTTGGAAGCGTTGGCCGCGGAGACCACGAACGAGAAGCTAGTG
GAGGGCGCTGTAGTAGAAGCGTTCGCTAGCATGCAACCTGAGCCACTTGC
CGCGGATGAAGCTCCTGCGCAGGAATCCGAAGCAACCATGCCACCAGATG
TGACCACCGCGCCTGTACCCATGTCGGAAGCGGTGACGGAGGAGCCTGTG
GCTGAAGAGGTCGAGTCACCCATCGATGTGGCACAGCCCGTCGATTCATC
ATGCGACATCGTACTGCCCACGGTTGATGTCACGGCCGATGAATCCACTC
CGGTGGTCGGCTCGTCAACCGACGTCCTGGCCGAGGAAGATGAAGCTGGA
TCGATCGCGCCAGAGGAGGAAAACCAGCCCGATGAAACGACAAAGGAAAT
CCGAATGGCCAATATTCCGGCCGGCGGGGAGTCTTCTACTGACGGCGAAG
CCCCGGTAACACCAGACATTGCCGAAGTTACGAAGGACACGAAGATGGAG
CACTCGACGGGTGCTTCTGCAGAGGAAATTCCCACGCCTTCTCAGTCAGA
CATGACTATAGTCGGTGGGTGTAGTTTCCGTAGAAGGTGTAAATTTCACA
TACTGATAGCAATTGTATTGGGTAGCGTACATTTTGATTCTGTTTCAGGG
AATGAGATCACCGGTCGAGCTTTATACCTGCTTCGTCCGTTATTTCAGGT
CCGGCAGAAGAAACAGCGATGGCGGAGCCCATCGTCGTCCCCGAGGAACC
CACGGTGGAAGCTGTGAGTGACGCCGTGCCTGACGATACCGACGCCGTGT
CGGAAACGTTGGCTGTGGAGAGCGCAAGCGAGAAGCTAGCGGAGGATCCT
GCAGAAAAAACTGCCCCTAGCGAGCAGTCTGAGTCACCTGCCGGGGAAGA
AGCTCCTGCGGAGGAATCCGAAACAATCATGCCGTCGGATGTCACCACCG
CGCCGATGCCCATCTCGGAAACGGTGACGGAGGAACCTGAGGCAGAAGAG
GTCGAGTTACCCACCAATGTGGCACAGCCCGTCGGTTCATCGCGCGATAT
CGTACTTCCCACGGTTGATGTCACAGCCAATGAATCTACTCCGGAGGTTG
AATCGCCATCCGACGTCCCGGCAGAGGAAGATGAAGCTAGACCGACTGCG
CCAGAGGAGGAAACCCAGGCCGATGAAAAGCCGAAGGAGATCCAAATGGT
CGATACTCCGGCCGCCGCGGAGCCTTCTACTGACGACGAAGTCCCGGTAG
CACCAGATGTCGCCGAGGTTGCGGAGGACAAGGAGACGGAGCACACGATG
GATGATCCTGCAGAGGAGATTCCCGCGCCTTCTCACCCAAACATCGCTAG
TACCGATGGGTGTAAATTTGGTAGGTGTAAACTTCACATACTGATAGCGG
TTGTGTTAGGTAGCGTACAATTTGATTCCATCTCAGAGAATGAGATCATC
GTTCGAGCTTTAAACCTGCTTTTCCCGTTATTTCAGGTTCGGCAGAAGAA
CCAGCAATGGCAGAGCTCGTCGTCGCCCCCGAGGAACCTATGGCGGAAGC
TGCGGGCGACGATGTGCCTGACGCTACCGACGCCGTGCCGGAAACCTTAG
CCCCGGAGACTACGGACGAGAAGCTAGTGGAGCACGCTGCAGGGAAAGCT
TTCGCTAGCAAGCGGCCTGAGCCACCTGCTGCGGAAGAAGCTCCTGCGGA
GGAATCCGAAGAAATCATGCCGCCGGACGTGACCGCCGCGCTGGCGTCCA
TCTCGCAAGCGGTACG
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Coding sequence (CDS) from alignment at F-serratus_M_contig649:68667..70732-

>mRNA_F-serratus_M_contig649.17436.1 ID=mRNA_F-serratus_M_contig649.17436.1|Name=mRNA_F-serratus_M_contig649.17436.1|organism=Fucus serratus male|type=CDS|length=3372bp|location=Sequence derived from alignment at F-serratus_M_contig649:68667..70732- (Fucus serratus male)
GACACGGAGACGGAGCACACGACGGATGCTTTTGCAGAGGAGATTCCCAC
GCCTTCTCAGCCAGACATGGCTAGTGCCGGACACGGAGACGGAGCACACG
ACGGATGCTTTTGCAGAGGAGATTCCCACGCCTTCTCAGCCAGACATGGC
TAGTGCCGGTCCGACAGAAGACCCAACAATGGCAGAGTCTGTCGTCGAAT
CCGAGAAACCCACGGTGGAAGCTGTGGGTGACGTCGTACCTGACGTTGCC
AACGTCGTTTTGGAAGCGTTGGCCGCGGAGACCACGAACGAGAAGCTAGT
GGAGGGCGCTGTAGTAGAAGCGTTCGCTAGCATGCAACCTGAGCCACTTG
CCGCGGATGAAGCTCCTGCGCAGGAATCCGAAGCAACCATGCCACCAGAT
GTGACCACCGCGCCTGTACCCATGTCGGAAGCGGTGACGGAGGAGCCTGT
GGCTGAAGAGGTCGAGTCACCCATCGATGTGGCACAGCCCGTCGATTCAT
CATGCGACATCGTACTGCCCACGGTTGATGTCACGGCCGATGAATCCACT
CCGGTGGTCGGCTCGTCAACCGACGTCCTGGCCGAGGAAGATGAAGCTGG
ATCGATCGCGCCAGAGGAGGAAAACCAGCCCGATGAAACGACAAAGGAAA
TCCGAATGGCCAATATTCCGGCCGGCGGGGAGTCTTCTACTGACGGCGAA
GCCCCGGTAACACCAGACATTGCCGAAGTTACGAAGGACACGAAGATGGA
GCACTCGACGGGTGCTTCTGCAGAGGAAATTCCCACGCCTTCTCAGTCAG
ACATGACTATAGTCGGTCCGACAGAAGACCCAACAATGGCAGAGTCTGTC
GTCGAATCCGAGAAACCCACGGTGGAAGCTGTGGGTGACGTCGTACCTGA
CGTTGCCAACGTCGTTTTGGAAGCGTTGGCCGCGGAGACCACGAACGAGA
AGCTAGTGGAGGGCGCTGTAGTAGAAGCGTTCGCTAGCATGCAACCTGAG
CCACTTGCCGCGGATGAAGCTCCTGCGCAGGAATCCGAAGCAACCATGCC
ACCAGATGTGACCACCGCGCCTGTACCCATGTCGGAAGCGGTGACGGAGG
AGCCTGTGGCTGAAGAGGTCGAGTCACCCATCGATGTGGCACAGCCCGTC
GATTCATCATGCGACATCGTACTGCCCACGGTTGATGTCACGGCCGATGA
ATCCACTCCGGTGGTCGGCTCGTCAACCGACGTCCTGGCCGAGGAAGATG
AAGCTGGATCGATCGCGCCAGAGGAGGAAAACCAGCCCGATGAAACGACA
AAGGAAATCCGAATGGCCAATATTCCGGCCGGCGGGGAGTCTTCTACTGA
CGGCGAAGCCCCGGTAACACCAGACATTGCCGAAGTTACGAAGGACACGA
AGATGGAGCACTCGACGGGTGCTTCTGCAGAGGAAATTCCCACGCCTTCT
CAGTCAGACATGACTATAGTCGGTCCGGCAGAAGAAACAGCGATGGCGGA
GCCCATCGTCGTCCCCGAGGAACCCACGGTGGAAGCTGTGAGTGACGCCG
TGCCTGACGATACCGACGCCGTGTCGGAAACGTTGGCTGTGGAGAGCGCA
AGCGAGAAGCTAGCGGAGGATCCTGCAGAAAAAACTGCCCCTAGCGAGCA
GTCTGAGTCACCTGCCGGGGAAGAAGCTCCTGCGGAGGAATCCGAAACAA
TCATGCCGTCGGATGTCACCACCGCGCCGATGCCCATCTCGGAAACGGTG
ACGGAGGAACCTGAGGCAGAAGAGGTCGAGTTACCCACCAATGTGGCACA
GCCCGTCGGTTCATCGCGCGATATCGTACTTCCCACGGTTGATGTCACAG
CCAATGAATCTACTCCGGAGGTTGAATCGCCATCCGACGTCCCGGCAGAG
GAAGATGAAGCTAGACCGACTGCGCCAGAGGAGGAAACCCAGGCCGATGA
AAAGCCGAAGGAGATCCAAATGGTCGATACTCCGGCCGCCGCGGAGCCTT
CTACTGACGACGAAGTCCCGGTAGCACCAGATGTCGCCGAGGTTGCGGAG
GACAAGGAGACGGAGCACACGATGGATGATCCTGCAGAGGAGATTCCCGC
GCCTTCTCACCCAAACATCGCTAGTACCGATGGGTGTAAATTTGGTCCGG
CAGAAGAAACAGCGATGGCGGAGCCCATCGTCGTCCCCGAGGAACCCACG
GTGGAAGCTGTGAGTGACGCCGTGCCTGACGATACCGACGCCGTGTCGGA
AACGTTGGCTGTGGAGAGCGCAAGCGAGAAGCTAGCGGAGGATCCTGCAG
AAAAAACTGCCCCTAGCGAGCAGTCTGAGTCACCTGCCGGGGAAGAAGCT
CCTGCGGAGGAATCCGAAACAATCATGCCGTCGGATGTCACCACCGCGCC
GATGCCCATCTCGGAAACGGTGACGGAGGAACCTGAGGCAGAAGAGGTCG
AGTTACCCACCAATGTGGCACAGCCCGTCGGTTCATCGCGCGATATCGTA
CTTCCCACGGTTGATGTCACAGCCAATGAATCTACTCCGGAGGTTGAATC
GCCATCCGACGTCCCGGCAGAGGAAGATGAAGCTAGACCGACTGCGCCAG
AGGAGGAAACCCAGGCCGATGAAAAGCCGAAGGAGATCCAAATGGTCGAT
ACTCCGGCCGCCGCGGAGCCTTCTACTGACGACGAAGTCCCGGTAGCACC
AGATGTCGCCGAGGTTGCGGAGGACAAGGAGACGGAGCACACGATGGATG
ATCCTGCAGAGGAGATTCCCGCGCCTTCTCACCCAAACATCGCTAGTACC
GATGGGTGTAAATTTGGTTCGGCAGAAGAACCAGCAATGGCAGAGCTCGT
CGTCGCCCCCGAGGAACCTATGGCGGAAGCTGCGGGCGACGATGTGCCTG
ACGCTACCGACGCCGTGCCGGAAACCTTAGCCCCGGAGACTACGGACGAG
AAGCTAGTGGAGCACGCTGCAGGGAAAGCTTTCGCTAGCAAGCGGCCTGA
GCCACCTGCTGCGGAAGAAGCTCCTGCGGAGGAATCCGAAGAAATCATGC
CGCCGGACGTGACCGCCGCGCTGGCGTCCATCTCGCAAGCGGTAGTTCGG
CAGAAGAACCAGCAATGGCAGAGCTCGTCGTCGCCCCCGAGGAACCTATG
GCGGAAGCTGCGGGCGACGATGTGCCTGACGCTACCGACGCCGTGCCGGA
AACCTTAGCCCCGGAGACTACGGACGAGAAGCTAGTGGAGCACGCTGCAG
GGAAAGCTTTCGCTAGCAAGCGGCCTGAGCCACCTGCTGCGGAAGAAGCT
CCTGCGGAGGAATCCGAAGAAATCATGCCGCCGGACGTGACCGCCGCGCT
GGCGTCCATCTCGCAAGCGGTA
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