mRNA_F-serratus_M_contig1228.1741.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1228.1741.1
Unique NamemRNA_F-serratus_M_contig1228.1741.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig1228.1741.1 vs. uniprot
Match: Q8LNW7_ORYSJ (Putative polyprotein n=5 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=Q8LNW7_ORYSJ)

HSP 1 Score: 265 bits (677), Expect = 9.240e-73
Identity = 202/669 (30.19%), Postives = 325/669 (48.58%), Query Frame = 1
Query:    1 IKCIRTDNNGEFEGE-FQRELDRRSITHEHTPPDTPQYNGVAECALGLLREKAIILMEELDDVINVPREKLWAQTMIFACDVTDKSVTTSTNEGKSPYELWFGKPPTASHLRPFGAVGYARQSVREHKMAPKGEKCVFMGIPRNFPTGSV----SALLVRSRNIVERQTAFSEDEREQQHEEGGAEAASGSAS--LEGPTVPALRKLAIDGNVPPILSSRT----RSRKPHTGVEREALHCFLPAIEAEKENGVEDVLACDDGGQMAMQATLDVPEPRNRRQAMESHEWEEWRKAEETEMLGMAENCVYNQVARPKDK--------------------LKYKCRLVAQGFWQVEGVHYTEKYSPTPSIASIRMLLATAAAKDGELRHFDAEQAFLKADIDEETYIEIPEEFQEF--PGAVGRLNEAIYGLVQAGRCWNNKFCDDMTAIEFEQAKADPCVFRKVVDGEAEIVVVVHVDDSLAHAKDQATMDRFAAELGQKFKLKDMGYAEYYMGCHITRNRKARELKSDQHLYLESMVKRFDVKKEAKIPAASGGCGLCMEAYTDSDFGACLDTRWSVSGAVLMLAKGAISWHSRMQEETASGTSEAEYVALSEVVRYVLFLRQVQEFMEPSMRVGAANVFEDNEGAIKLATNNHASRRTKHIDVKHHLV 1908
            +K +RTDN  EF  + F+       I H +T P TPQ NGVAE     +  KA  ++   D    +P++  WA+ +   C + ++S + +T++ K+P E+W G P   S LR FG   YA   V   K+ P+  KC+F+G P       +    +  +V SRN+V  ++    D+          E AS      +     P    +AI+ + P I  S +    +S K     ++   +   P    E+ N V   L+         +      EP    +A+ S +   W  A   EM  + +N  +  V  PK+K                     +YK RLVA+G+ Q+ G+ + + +SP    +SIR LL   A  D EL   D + AFL  +++E+ Y+E PE F        V RL +++YGL Q+ R W  +F   M + +F ++  D CV+ KVVDG A I ++++VDD L  AKD++ + +  A+L  +F +KD+G A+  +G  ITR R + +L   Q  Y++ +++RF++        +  G       Y DSDF   LD R S++G V  +    +SW + +Q   A  T+EAEY+A+SE  +  ++LR +  + E        N+F D++ AI L  +     RTKHIDV++H++
Sbjct:  590 VKILRTDNGMEFCSKIFKSYCKSEGIVHHYTVPHTPQQNGVAERMNMAIISKARCMLSNAD----LPKQ-FWAEAVSTTCYLINRSPSYATDK-KTPIEVWSGSPANYSDLRVFGCTAYAH--VDNGKLEPRAIKCIFLGYPSGVKGYKLWCPETKKVVISRNVVFHESVILHDKPSTNVPVESQEKASVQVEHLISSGHAPEKENVAINQDAPVIEDSDSSIVQQSSKRSIAKDKPKRNIKPPRRYIEEANIVAYALS-------VAEEIEGNAEPSTYSEAIVSDDCNRWITAMHDEMESLKKNHTWEFVKLPKEKKPIRCKWIFKRKEGMSPSDEARYKARLVAKGYSQIPGIDFNDVFSPIMKHSSIRTLLGIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVLGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDSCVYLKVVDGSA-IYLLLYVDDMLIAAKDKSEIAKLKAQLSSEFGMKDLGAAKKILGMEITRERHSGKLYLSQKGYIKKVLRRFNMHDVKPFGRSRDG----FVGYVDSDFAGDLDRRRSLTGYVFTIGGCDVSWKASLQATVALSTTEAEYMAISEACKEAIWLRGL--YTELCGVTSCINIFCDSQSAICLTKDQMFHERTKHIDVRYHII 1236          
BLAST of mRNA_F-serratus_M_contig1228.1741.1 vs. uniprot
Match: A0A151QNH6_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151QNH6_CAJCA)

HSP 1 Score: 229 bits (585), Expect = 1.480e-60
Identity = 198/758 (26.12%), Postives = 332/758 (43.80%), Query Frame = 1
Query:    1 IKCIRTDNNGEFEGEFQRELDRRSITHEHTPPDTPQYNGVAECALGLLREKAIILMEELDDVINVPREKLWAQTMIFACDVTDKSVTTSTNEGKSPYELWFGKPPTASHLRPFGAVGYARQSVREH-KMAPKGEKCVFMGIPRN---FPTGS-VSALLVRSRNIVERQTAFSEDEREQQHEEGGAEAASGSASLEGPTVPALRKLAID---------GNVPPILSSRTRSRKPHTGVEREALHCFLPAIEAEKENGVEDVLACDDGGQMAMQATL----DVPEPRNRRQAMESHEWEEWRKAEETEMLGMAENCVYNQVARPKD-------------------KLKYKCRLVAQGFWQVEGVHYTEKYSPTPSIASIRMLLATAAAKDGELRHFDAEQAFLKADIDEETYIEIPEEFQEFPGA---VGRLNEAIYGLVQAGRCWNNKFCDDMTAIEFEQAKADPCVFRKVVDGEAEIVVVVHVDDSLAHAKDQATMDRFAAELGQKFKLKDMGYAEYYMGCHITRNRKARELKSDQHLYLESMVKRFDV-----------------KKE----------AKIPAAS-------------------------------------------------------GGCGLCMEAYTDSDFGACLDTRWSVSGAVLMLAKGAISWHSRMQEETASGTSEAEYVALSEVVRYVLFLRQVQEFMEPSMRVGAANVFEDNEGAIKLATNNHASRRTKHIDVKHHLV 1908
            +KCIRTDN GE+ G F+       I HE  PP TPQ NGVAE     + EK   ++        +P+   W + ++ A D+ + S +   N G+ P E+W GK     HL+ FG   +      E  K+  K ++C+++  P++   F     V+  +VRSR+++     F ED+  Q               ++ P  P  +++            G +   +    ++ +P +                 +E  V   +      +           D  EP++  +A+E ++ E+W +A E E+  + EN  Y  V  P+                    K +YK R+V +G  Q +G+ + E +SP   + SIR +L  AA  D E+   D + AFL  D++EE Y+E PE F E PG    V RL +++YGL QA R W  KF   M    F++  AD CVF K  +    I+++++VDD L   KD+  +      L + F +KD+G  +  +G  I R+R  R L   Q  Y++ +++RF++                 KK+          +K+P +S                                                       G   L +  Y+D+D    +D+R S SG ++  A GAISW SR+Q+  A  T+EAE++A++E  + +L++++  + +       +  ++ D++ AI L+ N+    R+KHIDV++H +
Sbjct:  538 LKCIRTDNGGEYLGPFEYYCKTHGIRHEKVPPKTPQMNGVAERMNRTIAEKVRSMLSHA----KIPKS-FWGEAVLTAADLINLSPSRPLN-GEIPEEVWSGKKAYYGHLKVFGCRAFVHIPKDERTKLDAKVKECIYLRSPKDELGFRLWDPVNKKIVRSRDVI-----FFEDQTIQ--------------DIKKPEKPKQKEVQDSSPIVINNSGGEISQRIDEPNQTEQPESEQXXXXXXXXXXXXXXXQEPEVRRSMRVRQPSKRYFSDDYVNLTDEGEPQSFIEAIEMNDKEKWLQAMEEELQSLKENETYELVELPQGRKALKNKWVFKLKTEENNTKPRYKARIVVKGCNQKKGIDFEEIFSPVVKMTSIRAILGLAAKLDLEIEQLDVKTAFLHGDLEEEIYMEQPEGFAE-PGKEHLVCRLKKSLYGLKQAPRQWYKKFDLFMAQHNFKKTSADQCVFVKNYENGESIILLLYVDDMLIVGKDKTKIAALKKALSKSFAMKDLGSVKKILGMKIIRDRSKRMLWMSQEDYIKKVLERFNMHNAKSVHVPLPGHLKLSKKQCPVNEEKEEMSKVPYSSAVGSLMYAMVCTRPDIAYAVGVVSRFLSNPGKEHWNAVKWILRYLKGTAKSCLCFGNGNLMLTGYSDADMAGDVDSRKSTSGYLITFAGGAISWQSRLQKCIALSTTEAEFIAITEGCKEILWMKKFLQELGQDQE--SYVLYCDSQSAIHLSKNSTFHSRSKHIDVRYHWI 1267          
BLAST of mRNA_F-serratus_M_contig1228.1741.1 vs. uniprot
Match: A0A438E432_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=4 Tax=Vitis vinifera TaxID=29760 RepID=A0A438E432_VITVI)

HSP 1 Score: 228 bits (581), Expect = 3.950e-60
Identity = 204/753 (27.09%), Postives = 331/753 (43.96%), Query Frame = 1
Query:    1 IKCIRTDNNGEFEGEFQRELDRRSITHEHTPPDTPQYNGVAECALGLLREKAIILMEELDDVINVPREKLWAQTMIFACDVTDKSVTTSTNEGKSPYELWFGKPPTASHLRPFGAVGYARQSVREH-KMAPKGEKCVFMGIPR-NFPT---GSVSALLVRSRNIVERQTAFSEDEREQQHEEGGAEAASGSASLEGPTVPALRKL-------AIDGNVPPILSSRTRSRKPHTGVEREALHCFLPAIEAEKENGVEDVLACDDGGQMAMQATLDVPEPRNRRQAMESHEWEEWRKAEETEMLGMAENCVYNQVARPKDKL-------------------KYKCRLVAQGFWQVEGVHYTEKYSPTPSIASIRMLLATAAAKDGELRHFDAEQAFLKADIDEETYIEIPEEFQEFPG--AVGRLNEAIYGLVQAGRCWNNKFCDDMTAIEFEQAKADPCVF-RKVVDGEAEIVVVVHVDDSLAHAKDQATMDRFAAELGQKFKLKDMGYAEYYMGCHITRNRKARELKSDQHLYLESMVKRFDVKKEA----------------------------KIPAASG------------------------------------------------GCGLC-------MEAYTDSDFGACLDTRWSVSGAVLMLAKGAISWHSRMQEETASGTSEAEYVALSEVVRYVLFLRQVQEFMEPSMRVGAANVFEDNEGAIKLATNNHASRRTKHIDVKHHLV 1908
            +KC+R+DN GE+ G F +      I HE T   TPQ NGVAE     + E+   L+        +PR   W + M  A D+ + S +   N G  P ++W GK  +  HLR FG   +      E  K+ PK ++C+F+G    +F       V   +VRSR++V  +    ED  + +  E           L  P V  + +        A + +V P +      ++P                 ++K +  E V+  D G            EP   ++ ++     EW KA + EM  + EN  Y+ V  PK K                    ++K RLV +GF Q +GV + E +SP   ++SIR +L  AA+ + E+   D + AFL  D++EE Y+E PE F +      V +L +++YGL QA R W  KF   MT   + +   D CVF +K  DG   I+++++VDD L   +D + + +  +EL + F +KD+G A+  +G  I RNR    +   Q  Y++ +++RF++ K                              KIP AS                                                    LC       ++ +TDSD    +D+R S SG ++  A GA++W SR+Q+  A  T+EAE++A++E  + +L+L++  +  E  ++     +  D++ AI L+ N+    R+KHIDV++H +
Sbjct:  411 LKCVRSDNGGEYIGPFDQYCTNHGIRHEKTVKKTPQQNGVAERMNRTILERVRCLLSHS----KLPRS-FWGEAMRTAVDLINLSPSVPLN-GDVPEKVWTGKEVSYDHLRVFGCRAFVHIPKDERSKLDPKAKQCIFIGYGHEDFGYRLYDPVDKKVVRSRDVVFLEDQTIEDIDKLESAESSTNDLVDLDPLNPPVVHDIDEEVQTPHDDAAEDDVEPEIEGEQSPQEPLXXXXXX--RSTREKQPSKKYSSNEYVMISDQG------------EPETYQEVLKHENKTEWLKAMKEEMKSLNENHTYDLVKPPKGKKILKNKWVFRRKNDGNSSQPRFKARLVVKGFDQRKGVDFDEIFSPVVKMSSIRTVLGIAASMNLEVEQLDVKTAFLHGDLEEEIYMEQPEGFIDKGNDQLVCKLKKSLYGLKQAPRQWYRKFDSFMTEHGYSRTTLDHCVFVKKYPDGNF-IILLLYVDDMLIMGQDMSKISKLKSELSKSFAMKDLGPAKQILGIRIVRNRSHGLIWLSQENYVKKVLERFNMDKAKPVNCPLAGHFKLSSSQCPTSDEEKNEMQKIPYASAIGSLMYAMVCTRPDIAHAVGVVSRFMSNPGKEHWAAVKWILRYLQGTSKMSLCFGKGEPILDGFTDSDMAGDVDSRKSTSGYLITFAGGAVTWQSRLQKCVALSTTEAEFIAITEACKELLWLKKFLQ--ELGLKQERYVLHCDSQSAIHLSKNSSFHSRSKHIDVRYHWI 1140          
BLAST of mRNA_F-serratus_M_contig1228.1741.1 vs. uniprot
Match: G8DCY4_PHAVU (Putative gag/pol polyprotein n=1 Tax=Phaseolus vulgaris TaxID=3885 RepID=G8DCY4_PHAVU)

HSP 1 Score: 227 bits (579), Expect = 1.030e-59
Identity = 198/740 (26.76%), Postives = 318/740 (42.97%), Query Frame = 1
Query:    1 IKCIRTDNNGEFEGEFQRELDRRSITHEHTPPDTPQYNGVAECALGLLREKAIILMEELDDVINVPREKLWAQTMIFACDVTDKSVTTSTNEGKSPYELWFGKPPTASHLRPFGAVGYARQSVREHKMAPKGEKCVFMGIPRNFPTGSVSALLVRSRNIVERQTAFSEDEREQQHEEGGAEAASGSASLEGPTVPALRKLAIDGNVPPILSSRTRSRKPHTGVEREALHCFLPAIEAEKENGVEDVLACDDGGQMAMQATLDVPEPRNRRQAMESHEWEEWRKAEETEMLGMAENCVYNQVARPKDKL-------------------KYKCRLVAQGFWQVEGVHYTEKYSPTPSIASIRMLLATAAAKDGELRHFDAEQAFLKADIDEETYIEIPEEF--QEFPGAVGRLNEAIYGLVQAGRCWNNKFCDDMTAIEFEQAKADPCVFRKVVDGEAEIVVVVHVDDSLAHAKDQATMDRFAAELGQKFKLKDMGYAEYYMGCHITRNRKARELKSDQHLYLESMVKRFDVKKEA----------------------------KIPAAS-------------------------------------------------------GGCGLCMEAYTDSDFGACLDTRWSVSGAVLMLAKGAISWHSRMQEETASGTSEAEYVALSEVVRYVLFLRQVQEFMEPSMRVGAANVFEDNEGAIKLATNNHASRRTKHIDVKHHLV 1908
            +KCIRTDN GE+ G F     +  I HE TPP TPQ NG+AE     L E+   ++ +      +P+   W + +  A  V + S   + N  + P ++WFGK     HLR FG   Y       HK A +     FM             +   + N +        DE   QH++   +    +  +                  PI  S              A     P ++  +    + V   D+G            EP    +AMES E ++W  A + EM  + +N  ++ V  PKDK                    +YK RLV +GF Q +G+ + E +SP   ++SIR++L+ AA  D E+   D + AFL  D++EE Y++ P+ F  +     V RL +++YGL QA R W  KF   M    +++  +D CVF K    +  I+++++VDD L   KD + ++R   +L + F +KDMG A+  +G  I R+R+ ++L   Q  Y++ +++RF ++                               +IP AS                                                       GG    +  YTDSD G  +D+R S SG V+  A GA++W SR+Q+  A  T+EAE++A++E  + +L+++++ +  E S       +F D++ AI L  N+    R+KHIDV++H +
Sbjct:  537 LKCIRTDNGGEYCGPFDAYCKQHGIRHEKTPPKTPQLNGLAERMNRTLIERVRCMLSKA----KLPKH-FWGEALYTAVHVINLSPAIALN-AEVPDKVWFGKNVKYDHLRVFGCKAYV------HKKAVRSRDVKFMEDQTIEDIDKTEKITSETDNRLSNVDPVLSDE---QHDDVDDQQLGDAFDV------------------PIDDSEXXXXXXXXXXXXXAPE--PPQVQIRRYPSDDYVTLTDEG------------EPECYLEAMESEEKKKWLDAMQDEMKSLHDNHTFDLVKLPKDKKALENRWIYRVKQESNSTSPRYKARLVVKGFRQRKGIDFNEIFSPVVKMSSIRIVLSLAATLDLEVEQMDVKTAFLHGDLEEEIYMKQPDGFLVEGKEDHVCRLRKSLYGLKQAPRQWYKKFESVMCEQGYKKTTSDHCVFVKKFANDDFIILLLYVDDILIVGKDISMINRLKKQLSESFAMKDMGAAKQILGIRIMRDRQEKKLWLSQENYVKRVLQRFQMENAKVVSTPLATHFKLSTKQSPSYEYEKSDMQRIPYASAVGSLMYAMVCTRPDIAHVVGTVSRFMSNPGREHWNAVKWILRYLRGTTCLRLCFGGDKPTLVGYTDSDMGGDIDSRRSTSGYVIKFAGGAVAWQSRLQKCVALSTTEAEFIAITEACKELLWVKKLLQ--ELSFVQDKYLLFCDSQSAIYLGKNSTFHSRSKHIDVRYHWI 1227          
BLAST of mRNA_F-serratus_M_contig1228.1741.1 vs. uniprot
Match: UPI001004C95A (uncharacterized protein LOC114075238 n=1 Tax=Solanum pennellii TaxID=28526 RepID=UPI001004C95A)

HSP 1 Score: 226 bits (577), Expect = 2.280e-59
Identity = 215/753 (28.55%), Postives = 328/753 (43.56%), Query Frame = 1
Query:    1 IKCIRTDNNGEFEGEFQRELDRRSITHEHTPPDTPQYNGVAECALGLLREKAIILMEELDDVINVPREKLWAQTMIFACDVTDKSVTTSTNEGKSPYELWFGKPPTASHLRPFGAVGYARQSVREHKMAPKGEKCVFMGIPRNFPTGSVSALLVRSRNIVERQTAFSEDEREQQHEEGGAEAASGSASLEGPTVPALRKLAIDGNVPPILSSRTRSRKPHTGVEREALHCFLPA-------IEAEKENGVEDVLACDDGGQMAMQATLDVPEPRNRRQAMESHEWEEWRKAEETEMLGMAENCVYNQVARPKDKL-------------------KYKCRLVAQGFWQVEGVHYTEKYSPTPSIASIRMLLATAAAKDGELRHFDAEQAFLKADIDEETYIEIPEEFQEFPGA---VGRLNEAIYGLVQAGRCWNNKFCDDMTAIEFEQAKADPCVF-RKVVDGEAEIVVVVHVDDSLAHAKDQATMDRFAAELGQKFKLKDMGYAEYYMGCHITRNRKARELKSDQHLYLESMVKRFDVKKEA----------------------------KIPAASGG-------------------------------------------CG-----LCMEA-------YTDSDFGACLDTRWSVSGAVLMLAKGAISWHSRMQEETASGTSEAEYVALSEVVRYVLFLRQVQEFMEPSMRVGAAN----VFEDNEGAIKLATNNHASRRTKHIDVKHHLV 1908
            +KCIR+DN GE+ G F R    + I H+ TPP TPQ NG+AE     L E+   ++ +         +  WA+ +  A  V + S   +  +G  P  +W GK  +  HLR FG   +       HK                         LVRSR++V     F ED+  +  ++        S SL     P    +A + N+    +        H   +R   H  + A       I + + +  E VL  D G            EP +  +AMES E E W  A E E+  + +N  ++ V  PKD+                    +YK RLV +GF Q  GV + E +SP   ++SIR++L  AA+ D E+   D + AFL  D+DEE Y+E PE F E  G    V +L +++YGL QA R W  KF   M+   F++  +D CVF +K  DG+  I+V+++VDD L    +   + +   EL + F +KD+G A   +G  I R+RKA++L   Q  Y++ +++RF++ K                              K+P AS                                             CG     LC          YTDSD    +DTR S SG ++  A GA+SW SR+Q+  A  T+EAE +A+ E  + +L++++   F+     +G A     ++ D++ AI L  N+    R+KHIDV++H +
Sbjct: 1862 LKCIRSDNGGEYIGPFDRYCREQGIRHQKTPPKTPQLNGLAERMNRTLVERVRCMLSDAK-----LSDSFWAEALNTAAYVINLSPAVAL-DGDVPDRVWTGKNVSYDHLRVFGCKAFV------HKK------------------------LVRSRDVV-----FFEDQTIEDFDKADKADFQSSESLVD-VDPVPLTIAPEENLHNDENQVDNEDGDHVQNDR---HDVVDAPVQDDVRIPSSRYSPNEYVLLTDGG------------EPESLDEAMESEEKERWFDAMEDEIKSLHDNHTFDLVKLPKDRKALKNRWVFRVKHEDGNPVPRYKARLVVKGFNQKRGVDFDEIFSPVVKMSSIRVVLGLAASLDLEVEQMDVKTAFLHGDLDEEIYMEQPEGF-EVKGKENYVCKLKKSLYGLKQAPRQWYRKFGSFMSQQGFKKTSSDHCVFVQKFSDGDF-IIVLLYVDDMLVVGHNTCRIQKLKQELSKSFAMKDLGPARQILGMQIVRDRKAKKLVLSQEKYIQKVLRRFNMDKAKVVSTPLAMHFKLSTKQCPSSDDEKEDMKKVPYASAVGSLMYAMVCTRPDIAHAVGVVSRFLSNPGREHWNAVKWVMRYLCGTSSLSLCFGTGRPILCGYTDSDMAGDVDTRKSTSGYLVTFAGGAVSWQSRLQKCVALSTTEAELIAVVEACKELLWMKR---FLG---ELGCAQERYVLYCDSQSAIHLGKNSTFHGRSKHIDVRYHWI 2549          
BLAST of mRNA_F-serratus_M_contig1228.1741.1 vs. uniprot
Match: A0A2K3MXK1_TRIPR (Putative gag/pol polyprotein n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3MXK1_TRIPR)

HSP 1 Score: 224 bits (572), Expect = 7.510e-59
Identity = 207/765 (27.06%), Postives = 328/765 (42.88%), Query Frame = 1
Query:    1 IKCIRTDNNGEFEGEFQRELDRRSITHEHTPPDTPQYNGVAECALGLLREKAIILMEELDDVINVPREKLWAQTMIFACDVTDKSVTTSTNEGKSPYELWFGKPPTASHLRPFGAVGYARQSVREH-KMAPKGEKCVFMGIP------RNFPTGSVSALLVRSRNIVERQTAFSEDEREQQHEEGGAEAAS----GSASLEGPTV----PALRKLAIDGNVPPILSSR------TRSRKPHTGVEREALHCFLPAIEAEKENGVE----DVLACDDGGQMAMQATLDVPEPRNRRQAMESHEWEEWRKAEETEMLGMAENCVYNQVARPKDKL-------------------KYKCRLVAQGFWQVEGVHYTEKYSPTPSIASIRMLLATAAAKDGELRHFDAEQAFLKADIDEETYIEIPEEFQEF--PGAVGRLNEAIYGLVQAGRCWNNKFCDDMTAIEFEQAKADPCVFRKVVDGEAEIVVVVHVDDSLAHAKDQATMDRFAAELGQKFKLKDMGYAEYYMGCHITRNRKARELKSDQHLYLESMVKRF--DVKKEAKIPAAS-------------------------GGCGLCMEA--------------------------------------------------------YTDSDFGACLDTRWSVSGAVLMLAKGAISWHSRMQEETASGTSEAEYVALSEVVRYVLFLRQVQEFMEPSMRVGAANVFEDNEGAIKLATNNHASRRTKHIDVKHHLV 1908
            +KCIRT+N GE+ G F +    + I H+ +PP TPQ NG+AE     L E+   L+ +     ++  +  W + +     + + +      +   P  +W GK  +  HLR FG + Y      E  K+  K +KCVF+G        R F    V   L+RSR++V  +    ED  + ++++   E       GS ++    +      +    +D NV  +L+          +      V +E     L     +K   V     + +   DGG           EP N ++ +E    +EW  A E EM  + EN  +  V  PK K                    +YK RLV +GF Q EG+ + E ++P   + SIRM+L  AA+ D E+   D +  FL  D+ EE Y+E P+ F+E      V +L +++YGL QA R W  KF   M    ++  KAD CVF + +  +  I+++++VDD L   K+ + +      L + F +KD+G A   +G  I R+R  ++L   Q  Y+E +++RF  D  K   IP AS                            G  M A                                                        YTDSD    LD R S SG ++  A GA++W S++Q+  A  T+EAE++A+ E  + +L+LR+    ME  ++     +F DN+  I L+ N+    R+KHIDV++H +
Sbjct:  549 LKCIRTNNGGEYVGPFDKYCQDQGIRHQKSPPKTPQLNGLAERMNRTLVERMRCLLSQ-----SMLPKYFWGEALNTVVHLLNLTPCVPL-KFDVPNHVWNGKEVSYDHLRVFGCMAYVHIPKDERSKLDEKSKKCVFVGYGLDEFGYRFFDP--VQRKLIRSRDVVFMEDYTIEDIDKVENKDPTFEDEEIVDIGSTTIAPTPIIFEDAPIENQGMDLNVDNVLNPNDVVDVGATNDVVENEVVQEVASNELRRSTRDKRPSVRYPSNEYVFLTDGG-----------EPENFKEVLEDENKKEWMDAMEDEMQSLRENNTFELVKLPKGKRALKNRWVYRIKQDECTSQRRYKARLVVKGFKQREGIDFGEIFAPVVKMQSIRMVLGLAASLDLEVEKMDVKTTFLHGDLHEEIYMEQPDGFREKGKEDYVCKLVKSLYGLKQAPRQWYQKFNSVMIEHGYKMTKADHCVFFRNLSEDDFIILLLYVDDMLIVGKNISRIRELKNTLSESFSMKDLGAARKILGIEIVRDRNEKKLYLSQEKYVEKVLRRFSMDKAKAVSIPLASHFKLSHKLCPSTDEEKLRMKSIPYSSAVGSLMYAMVCTRPDIAHAVGVVSRYLSNPGKVHWEAVKWVMRYLRGSSNLKLTLGCKKPMLVGYTDSDLAGSLDDRKSTSGXMVTFAGGAVAWQSKLQKCVALSTTEAEFIAVVEASKELLWLRKFA--MELGVKQEKYVLFCDNQSVIHLSKNSSFHSRSKHIDVRYHWI 1292          
BLAST of mRNA_F-serratus_M_contig1228.1741.1 vs. uniprot
Match: A0A6H5K0K7_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0K7_9PHAE)

HSP 1 Score: 211 bits (538), Expect = 1.200e-55
Identity = 132/381 (34.65%), Postives = 196/381 (51.44%), Query Frame = 1
Query:  841 WRKAEETEMLGMAENCVYNQVARPKDKLKYKCRLVAQGFWQVEGVHYTEKYSPTPSIASIRMLLATAAAKDGELRHFDAEQAFLKADIDEETYIEIPEEFQEFPGAVGRLNEAIYGLVQAGRCWNNKFCDDMTAIEFEQAKADPCVFRKVVDGEAEIVVVVHVDDSLAHAKDQATMDRFAAELGQKFKLKDMGYAEYYMGCHITRNRKARELKSDQHLYLESMVKRFDVKKEAKIPAASGGCGLCMEAY------TDSDF-------------------GACLDTRWSVSGAVLMLAKGAISWHSRMQEETASGTSEAEYVALSEVVRYVLFLRQVQEFMEPSMRVGAANVFEDNEGAIKLATNNHASRRTKHIDVKHHLV 1908
            W  AE  E  G+     + +       ++ K RLVA+GF Q EGV + E +SP PSI SIR+L A A   D +L HFDAEQAF+++++DE  +I +P       G V RL  ++YGL QA R W++     M ++ FE   AD CV R +  G   +VVV+HVDD  +    ++  D+F  EL +   + ++G   +Y GCH  R+     +   Q    E +V +F V  + + P      GL +E Y       D  F                    A  D R SVS A++M A   + +  R Q+     ++EAEYVA+S+ ++  +FLR + +F+ P   VG   V+EDN GAI LA+N   +  +KHID++HH +
Sbjct:  337 WTNAERKEFFGLNAVGTFEEGDEFGYAVRAKARLVARGFAQREGVDFFETFSPCPSITSIRLLAAIACVLDWDLCHFDAEQAFVQSELDEVVFIRLPPGCGALSGKVVRLRRSLYGLKQASRTWHHHLMRGMKSLGFEPCAADACVMRLIESGVVTMVVVIHVDDIFSIGL-KSRCDQFGVELNRYMPISNLGELRWYAGCHFPRDTVLGTVTISQQAVAEKIVAKFGVTTDKETPMV---VGLKLEQYDADEPDVDEPFRSLVGYLMWLANQIRPDILNAATDRR-SVSWALVMFAGACVMYLCRTQKSVTLSSTEAEYVAMSDGMKEAIFLRYLWKFIFPGRDVGCTPVWEDNVGAIHLASNPATTPNSKHIDIRHHFI 712          
BLAST of mRNA_F-serratus_M_contig1228.1741.1 vs. uniprot
Match: A0A8J6CMG8_9ROSI (Uncharacterized protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J6CMG8_9ROSI)

HSP 1 Score: 213 bits (542), Expect = 3.480e-55
Identity = 186/669 (27.80%), Postives = 311/669 (46.49%), Query Frame = 1
Query:  112 NGVAECALGLLREKAIILMEELDDVINVPREKLWAQTMIFACDVTDKSVTTSTNEGKSPYELWFGKPPTASHLRPFGAVGYARQSVREHKMAPKGEKCVFMGIPRNFPTGSV----SALLVRSRNIVERQTAF-----------SEDEREQQHEEGGAEAASGSASLEGPTVPALRKLAIDGNVPPILSSRTRSRKPHTGVEREALHCFLPAIEAEKENGVEDVLACDDGGQMAMQATLDVPEPRNRRQAMESHEWEEWRKAEETEMLGMAENCVYNQVARPKDKL--------------------KYKCRLVAQGFWQVEGVHYTEKYSPTPSIASIRMLLATAAAKDGELRHFDAEQAFLKADIDEETYIEIPEEFQ--EFPGAVGRLNEAIYGLVQAGRCWNNKFCDDMTAIEFEQAKADPCV-FRKVVDGEAEIVVVVHVDDSLAHAKDQATMDRFAAELGQKFKLKDMGYAEYYMGCHITRNRKARELKSDQHLYLESMVKRFDVKKE----------------------------AKIPAASGGCGLCME----AYTDSDFGACLDTRWSVSGAVLMLAKGAISWHSRMQEETASGTSEAEYVALSEVVRYVLFLRQVQEFMEPSMRVGAANVFEDNEGAIKLATNNHASRRTKHIDVKHHLV 1908
            NGV E     + +K   ++      +N+P+   WA+    AC + ++S + +  E K+  E+WF  P   S L+ FG   YA   V   K+ P+  KCVF+G   +     +    +  +V SR++V  +TA             E++++ +H+         S  +E   V +  + +I  N      +R   + P    E + +   L        N  ED+    D  Q          EP N  +A+   + E+W  A + EM  + +N  ++ V  PK K                     +YK RLV +G+ Q+ GV +T+ +SP    +SIR LL   A  D EL   D +  FL  +++E+ Y++ PE F   E       L +++YGL Q+ R W  +F   MT+ +F+++  D CV F+K  DG   + + ++VDD L  AKD+  + +  A+L ++F++KD+G A+  +G  I R+RKA +L   Q  Y+E ++ RF+++                              + +P +S    L        Y D+DF   LD R S++G V  +   AISW + +Q   A  T+EAEY+A++E  + V++L+ +  F E +  +  + VF D++  I L  +     RTKHIDV++H V
Sbjct:  371 NGVIERMNRTIMKKVRCMLSN----VNLPKS-FWAEAASTACFLINRSPSVAI-EKKTTQEVWFDNPANYSDLKIFGCPAYAH--VDNGKLEPRSIKCVFLGYKASVKGYKLWCPENRKVVISRDVVFDETAMLPNLSLKDSSNKENKKQVEHQINTESTHQASTKIEN-RVASSPQYSIAKN-----RTRREIKPPKKYAEADLVAYVL--------NVAEDI----DANQ----------EPSNYSEAISCEDSEKWMFAMQEEMESLYKNKTWDLVKLPKGKKTVHCKWVFKKKEGTPGVEEPRYKARLVTKGYSQIPGVDFTDVFSPVVKHSSIRALLGIVAMHDLELEQLDVKTVFLHGELEEDFYMQQPERFTVLEKEDYACLLKKSLYGLKQSPRQWYKRFDSFMTSHDFKRSSFDSCVYFKKNSDGSF-VYLFLYVDDMLIAAKDKGEIRKVKAQLSKEFEMKDLGPAKKILGIEILRDRKASKLYLSQKGYIEKVLCRFNMQSAKPISTPLATHFRLSSALSLQSNDEIEYMSHVPYSSAVGSLITRDGVIGYVDADFAGDLDRRRSLTGYVFTIGVCAISWKATLQTTVALSTTEAEYMAITEACKEVIWLKGL--FSELNEDLQISTVFCDSQSVIFLTKDQMFHERTKHIDVRYHFV 1000          
BLAST of mRNA_F-serratus_M_contig1228.1741.1 vs. uniprot
Match: A0A6H5K4U5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4U5_9PHAE)

HSP 1 Score: 211 bits (538), Expect = 2.150e-54
Identity = 125/375 (33.33%), Postives = 196/375 (52.27%), Query Frame = 1
Query:  925 KYKCRLVAQGFWQVEGVHYTEKYSPTPSIASIRMLLATAAAKDGELRHFDAEQAFLKADIDEETYIEIPEEFQEFPGAVGRLNEAIYGLVQAGRCWNNKFCDDMTAIEFEQAKADPCVFRKVVDGEAEIVVVVHVDDSLAHAKDQATMDRFAAELGQKFKLKDMGYAEYYMGCHITRNRKARELKSDQHLYLESMVKRFDVKKEAKIPAASG---------------------------------------------GC--GLCMEAYTDSDFGACLDTRWSVSGAVLMLAKGAISWHSRMQEETASGTSEAEYVALSEVVRYVLFLRQVQEFMEPSMRVGAANVFEDNEGAIKLATNNHASRRTKHIDVKHHLV 1908
            K K RLVA+G  Q E + + E Y+PT S++ +RML A+A   + +L HFD EQAF++++++E+  + +P+      G +  L +++YGL Q+ R W+      + A+ FEQ  AD CVFR +  G   +++VVHVDD  A   ++   D+F A+L +   +K++G   +Y GC   R+++   L   Q  + + +   + V     +P +SG                                             G   G  ++ Y D+DF +    R SVSG ++    G +SW SR Q+     T+EAEYVAL +VV+ +LFLRQV  FM P + +    VFEDN+GAI+LA N  ++  +KHIDV+HH +
Sbjct: 1155 KVKARLVARGDMQREYIDFGELYAPTVSVSCVRMLAASACELNLDLCHFDVEQAFVRSELEEDVNMRLPQGCGALSGMIVILGKSLYGLRQSPRQWHAMLKRCLVALGFEQCMADACVFRLIEGGCVVLILVVHVDDIFA-VGERERCDKFGADLNKSVPVKNLGELRWYSGCLYERSKETGRLTISQQTFADELAAEYGVPGGKSVPMSSGVKLSDFDADEEATDFPFRELVHWDEAMAILGYAKRTSYMGVSFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGVVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQVWRFMLPKVSMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFL 1528          
BLAST of mRNA_F-serratus_M_contig1228.1741.1 vs. uniprot
Match: A0A8J6D8V3_9ROSI (Uncharacterized protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J6D8V3_9ROSI)

HSP 1 Score: 207 bits (527), Expect = 6.440e-53
Identity = 167/570 (29.30%), Postives = 263/570 (46.14%), Query Frame = 1
Query:    1 IKCIRTDNNGEFEGEFQRELDRRSITHEHTPPDTPQYNGVAECALGLLREKAIILMEELDDVINVPREKLWAQTMIFACDVTDKSVTTSTNEGKSPYELWFGKPPTASHLRPFGAVGYARQSVREH-KMAPKGEKCVFMGIPRNFPTG-----SVSALLVRSRNIV--ERQTAFSEDEREQQHEEGGAEAAS------------------GSAS--------LEGPTVPALRKLAIDGNVPPILSSRTRSRKPHTGVEREALHCFLPAIEAEKENGVEDVLACDDGGQMAMQATLDVPEPRNRRQAMESHEWEEWRKAEETEMLGMAENCVYNQVARPKDK-------------------LKYKCRLVAQGFWQVEGVHYTEKYSPTPSIASIRMLLATAAAKDGELRHFDAEQAFLKADIDEETYIEIPEEF--QEFPGAVGRLNEAIYGLVQAGRCWNNKFCDDMTAIEFEQAKADPCVFRKVVDGEAEIVVVVHVDDSLAHAKDQATMDRFAAELGQKFKLKDMGYAEYYMGCHITRNRKARELKSDQHLYLESMVKRFDVKKEAKI 1545
            +KCIRTDN GE+ G F     R+ I H+ TPP TPQ NG+AE     L E+   L+ +      +PR   WA+ +     V + S +    +G  P  +WFGK  +  HLR FG   +      E  K+  K  +C+F+G   +   G      V   LVRSR++V  E QT    D+ E+   +   +                     G  S         + P   A+     +   PP +  R  SR   + V   +                ++ +   DGG           EP    +AM+S   ++W +A + E+  + EN  +  V  P+ K                   L+YK RLV +G+ Q +GV + E +SP   ++SIR +L+ AA  D E+   D + AFL  D++EE Y+E PE F  Q     V RL +++YGL QA R W  KF   M    +++  +D CVF K   G+  I+++++VDD L   ++ + +++   EL + F +KD+G A+  +G  +TR+RKA++L   Q  Y+E +++RF + K   +
Sbjct: 1293 LKCIRTDNGGEYTGLFHEYCLRQGIRHQRTPPKTPQLNGLAERMNRTLIERVRCLLSDA----KLPRS-FWAEALNTVAHVINLSPSVPL-QGDVPDRVWFGKDVSYDHLRVFGCKAFVHVPKDERSKLDAKTRQCIFIGYGLDGEFGYRLYDPVQKKLVRSRDVVFIEDQTIDDIDKTEKVDSQDSGDLIDVNPAPLDSSPDPIQDDVHGDVSDDHQDIGDFDTPMNDAVNDQQQEPIAPPAVPLRRSSRDRRSSVRYSS----------------DEYVLLTDGG-----------EPECYEEAMKSECKDQWVEAMKDELQSLHENHTFELVKLPEGKRALKNRWVYRLKQEEKSSSLRYKARLVVKGYAQKKGVDFEEIFSPVVKMSSIRTILSLAACYDLEVEQMDVKTAFLHGDLEEELYMEQPEGFVLQGKEDYVCRLKKSLYGLKQAPRQWYKKFESVMGEQGYKKTTSDHCVFVKRFSGDDFIILLLYVDDMLIVGQNASRIEKLKQELSKSFAMKDLGPAKQILGIRLTRDRKAKKLWLSQERYIEKVLQRFSMDKAKAV 1829          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1228.1741.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Q8LNW7_ORYSJ9.240e-7330.19Putative polyprotein n=5 Tax=Oryza sativa subsp. j... [more]
A0A151QNH6_CAJCA1.480e-6026.12Retrovirus-related Pol polyprotein from transposon... [more]
A0A438E432_VITVI3.950e-6027.09Retrovirus-related Pol polyprotein from transposon... [more]
G8DCY4_PHAVU1.030e-5926.76Putative gag/pol polyprotein n=1 Tax=Phaseolus vul... [more]
UPI001004C95A2.280e-5928.55uncharacterized protein LOC114075238 n=1 Tax=Solan... [more]
A0A2K3MXK1_TRIPR7.510e-5927.06Putative gag/pol polyprotein n=1 Tax=Trifolium pra... [more]
A0A6H5K0K7_9PHAE1.200e-5534.65Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A8J6CMG8_9ROSI3.480e-5527.80Uncharacterized protein n=1 Tax=Gossypium anomalum... [more]
A0A6H5K4U5_9PHAE2.150e-5433.33Integrase catalytic domain-containing protein n=1 ... [more]
A0A8J6D8V3_9ROSI6.440e-5329.30Uncharacterized protein n=1 Tax=Gossypium anomalum... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1228contigF-serratus_M_contig1228:186161..188605 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score236.1
Seed ortholog evalue4.5e-59
Seed eggNOG ortholog67593.Physo138912
Hectar predicted targeting categoryother localisation
EggNOG free text desc.transposition, RNA-mediated
EggNOG OGs3QGIS@4776,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
Exons4
Model size1908
Cds size1908
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1228.1741.1prot_F-serratus_M_contig1228.1741.1Fucus serratus malepolypeptideF-serratus_M_contig1228 186161..188605 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929143.5407276-CDS-F-serratus_M_contig1228:186160..1866521622929143.5407276-CDS-F-serratus_M_contig1228:186160..186652Fucus serratus maleCDSF-serratus_M_contig1228 186161..186652 +
1690962723.2893977-CDS-F-serratus_M_contig1228:186160..1866521690962723.2893977-CDS-F-serratus_M_contig1228:186160..186652Fucus serratus maleCDSF-serratus_M_contig1228 186161..186652 +
1622929143.729211-CDS-F-serratus_M_contig1228:186880..1873121622929143.729211-CDS-F-serratus_M_contig1228:186880..187312Fucus serratus maleCDSF-serratus_M_contig1228 186881..187312 +
1690962723.3021994-CDS-F-serratus_M_contig1228:186880..1873121690962723.3021994-CDS-F-serratus_M_contig1228:186880..187312Fucus serratus maleCDSF-serratus_M_contig1228 186881..187312 +
1622929143.8327904-CDS-F-serratus_M_contig1228:187369..1880051622929143.8327904-CDS-F-serratus_M_contig1228:187369..188005Fucus serratus maleCDSF-serratus_M_contig1228 187370..188005 +
1690962723.3135161-CDS-F-serratus_M_contig1228:187369..1880051690962723.3135161-CDS-F-serratus_M_contig1228:187369..188005Fucus serratus maleCDSF-serratus_M_contig1228 187370..188005 +
1622929143.8515785-CDS-F-serratus_M_contig1228:188257..1886051622929143.8515785-CDS-F-serratus_M_contig1228:188257..188605Fucus serratus maleCDSF-serratus_M_contig1228 188258..188605 +
1690962723.3237371-CDS-F-serratus_M_contig1228:188257..1886051690962723.3237371-CDS-F-serratus_M_contig1228:188257..188605Fucus serratus maleCDSF-serratus_M_contig1228 188258..188605 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1228.1741.1

>prot_F-serratus_M_contig1228.1741.1 ID=prot_F-serratus_M_contig1228.1741.1|Name=mRNA_F-serratus_M_contig1228.1741.1|organism=Fucus serratus male|type=polypeptide|length=636bp
IKCIRTDNNGEFEGEFQRELDRRSITHEHTPPDTPQYNGVAECALGLLRE
KAIILMEELDDVINVPREKLWAQTMIFACDVTDKSVTTSTNEGKSPYELW
FGKPPTASHLRPFGAVGYARQSVREHKMAPKGEKCVFMGIPRNFPTGSVS
ALLVRSRNIVERQTAFSEDEREQQHEEGGAEAASGSASLEGPTVPALRKL
AIDGNVPPILSSRTRSRKPHTGVEREALHCFLPAIEAEKENGVEDVLACD
DGGQMAMQATLDVPEPRNRRQAMESHEWEEWRKAEETEMLGMAENCVYNQ
VARPKDKLKYKCRLVAQGFWQVEGVHYTEKYSPTPSIASIRMLLATAAAK
DGELRHFDAEQAFLKADIDEETYIEIPEEFQEFPGAVGRLNEAIYGLVQA
GRCWNNKFCDDMTAIEFEQAKADPCVFRKVVDGEAEIVVVVHVDDSLAHA
KDQATMDRFAAELGQKFKLKDMGYAEYYMGCHITRNRKARELKSDQHLYL
ESMVKRFDVKKEAKIPAASGGCGLCMEAYTDSDFGACLDTRWSVSGAVLM
LAKGAISWHSRMQEETASGTSEAEYVALSEVVRYVLFLRQVQEFMEPSMR
VGAANVFEDNEGAIKLATNNHASRRTKHIDVKHHLV
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mRNA from alignment at F-serratus_M_contig1228:186161..188605+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1228.1741.1 ID=mRNA_F-serratus_M_contig1228.1741.1|Name=mRNA_F-serratus_M_contig1228.1741.1|organism=Fucus serratus male|type=mRNA|length=2445bp|location=Sequence derived from alignment at F-serratus_M_contig1228:186161..188605+ (Fucus serratus male)
ATCAAGTGCATACGGACGGATAACAATGGCGAGTTTGAGGGGGAATTTCA GCGCGAGTTGGACCGGCGCAGCATCACGCACGAGCATACCCCGCCAGACA CGCCTCAGTACAATGGGGTGGCCGAATGTGCGCTTGGGCTTTTGAGAGAA AAGGCGATCATCCTGATGGAGGAGCTAGACGACGTCATCAACGTGCCGCG AGAGAAGCTGTGGGCTCAGACAATGATTTTCGCGTGCGACGTCACTGACA AGTCAGTCACAACGTCAACGAATGAGGGTAAGTCGCCGTATGAACTGTGG TTCGGAAAACCCCCTACTGCCAGTCATTTGCGACCGTTTGGAGCGGTGGG ATACGCGCGACAGAGCGTGCGCGAACATAAGATGGCGCCAAAAGGGGAGA AATGCGTGTTCATGGGAATTCCCCGAAACTTCCCCACTGGCTCGGTAAGC GCGCTACTCGTAAGGTCAAGAAATATCGTGGAAAGGCAGACCGTGCAGTG GATCGACGGGCCTAAATAGACAGGGAGTGACGGCACCGGCAGTGACGACC GCGGCATGAAGTCGGCGAGAGGTGAAATCATTGTTGAGAGAGGTACTCCG CAGATAAATGTCCAGGAGCTAGAACAGGAACAACACAAACACGAGTGACA GGAGGCGATTTCGGAACTCGAAGGGGAGACGCAGGGGGCGTTATCAGAAC ATGAGGAGGATTCGCAGGAGGCGTTTTCGGAAGACGAGCGCGAGCAGCAG CATGAGGAAGGGGGAGCGGAAGCTGCATCAGGGTCGGCAAGTTTGGAGGG ACCGACCGTACCCGCGCTGCGAAAGCTCGCCATCGACGGCAATGTCCCAC CCATACTGTCATCACGTACAAGGAGTCGAAAACCCCACACCGGTGTGGAG AGGGAAGCGTTGCACTGTTTCTTGCCGGCGATTGAGGCCGAAAAGGAAAA CGGCGTGGAAGATGTGTTGGCATGCGACGACGGGGGCCAGATGGCTATGC AAGCGACGCTAGATGTACCGGAACCGAGAAATCGGCGACAGGCGATGGAA TCGCATGAATGGGAAGAATGGCGGAAGGCAGAAGAGACTGAGATGCTTGG AATGGCCGAGAATTGCGTTTATAATCAGGTGGCTCGGCCGAAGGATAAGC TCGTGATCGGCACGAAAATGTTGTACAAGCGAAAAATCGGGTAGGACGGC AAGGTCGAGAAATACAAGTGTCGACTTGTCGCTCAAGGGTTTTGGCAGGT GGAAGGTGTACACTACACGGAAAAGTACTCGCCCACACCATCAATCGCGT CAATCCGGATGCTTTTGGCGACGGCAGCGGCCAAGGATGGAGAGCTGCGC CATTTCGACGCAGAGCAGGCATTTTTGAAGGCGGATATTGACGAAGAGAC ATACATAGAGATCCCCGAGGAGTTCCAGGAGTTTCCGGGGGCAGTGGGAC GGCTTAATGAGGCCATTTACGGACTCGTGCAGGCGGGGAGGTGCTGGAAT AATAAGTTCTGTGACGACATGACGGCGATTGAATTCGAGCAGGCAAAGGC GGACCCGTGCGTGTTCCGCAAGGTCGTTGACGGCGAGGCGGAGATAGTGG TGGTCGTACACGTAGACGACAGCCTTGCCCACGCCAAAGACCAAGCGACG ATGGATAGATTCGCGGCCGAGCTTGGGCAGAAGTTTAAGTTGAAGGACAT GGGGTACGCTGAGTACTACATGGGTTGTCACATCACCAGGAACCGCAAGG CACGCGAATTAAAGTCCGACCAACACCTGTACTTGGAGTCAATGGTAAAG AGATTTGACGTCAAGAAGGAAGCTAAAATACCGGCTGCGTCGGGGGTGCC GACGCTCTCAAAGGCGGATGAACAGCGGAACCCGGAGGAGAAGAAAGAAA TTAAGATGTTCCCGTACCGAGAGGCAGTGGGGGTGCTCATGTGGACGGCG ACGATGACACGGCCGGATATTGCGTGCGCCGTACGCGCTGTGGCCAGATT CTGCGAAAACCCTGGGCCGGCACACAAGAAGGCAGTGATGAAGATCTTCC AGTATCTCCTTCACACGAAAGAATGAGGGATTACGTACGGTGGACAGGGC TGTGGACTTTGCATGGAAGCATATACGGACTCGGACTTCGGAGCCTGCCT GGACACAAGATGGTCGGTTTCAGGTGCGGTGTTGATGTTGGCCAAGGGAG CGATCAGTTGGCACTCAAGGATGCAAGAAGAAACAGCATCAGGTACCTCA GAGGCAGAGTACGTTGCCTTATCAGAGGTAGTAAGATATGTACTATTTTT GAGACAGGTGCAGGAGTTCATGGAACCGTCGATGAGGGTCGGTGCGGCAA ATGTGTTTGAAGATAATGAGGGGGCCATCAAGCTGGCCACAAACAACCAT GCTAGCCGTAGGACTAAGCATATTGATGTGAAGCATCATCTAGTA
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Coding sequence (CDS) from alignment at F-serratus_M_contig1228:186161..188605+

>mRNA_F-serratus_M_contig1228.1741.1 ID=mRNA_F-serratus_M_contig1228.1741.1|Name=mRNA_F-serratus_M_contig1228.1741.1|organism=Fucus serratus male|type=CDS|length=3816bp|location=Sequence derived from alignment at F-serratus_M_contig1228:186161..188605+ (Fucus serratus male)
ATCAAGTGCATACGGACGGATAACAATGGCGAGTTTGAGGGGGAATTTCA
GCGCGAGTTGGACCGGCGCAGCATCACGCACGAGCATACCCCGCCAGACA
CGCCTCAGTACAATGGGGTGGCCGAATGTGCGCTTGGGCTTTTGAGAGAA
AAGGCGATCATCCTGATGGAGGAGCTAGACGACGTCATCAACGTGCCGCG
AGAGAAGCTGTGGGCTCAGACAATGATTTTCGCGTGCGACGTCACTGACA
AGTCAGTCACAACGTCAACGAATGAGGGTAAGTCGCCGTATGAACTGTGG
TTCGGAAAACCCCCTACTGCCAGTCATTTGCGACCGTTTGGAGCGGTGGG
ATACGCGCGACAGAGCGTGCGCGAACATAAGATGGCGCCAAAAGGGGAGA
AATGCGTGTTCATGGGAATTCCCCGAAACTTCCCCACTGGCTCGGTAAGC
GCGCTACTCGTAAGGTCAAGAAATATCGTGGAAAGGCAGACCATCAAGTG
CATACGGACGGATAACAATGGCGAGTTTGAGGGGGAATTTCAGCGCGAGT
TGGACCGGCGCAGCATCACGCACGAGCATACCCCGCCAGACACGCCTCAG
TACAATGGGGTGGCCGAATGTGCGCTTGGGCTTTTGAGAGAAAAGGCGAT
CATCCTGATGGAGGAGCTAGACGACGTCATCAACGTGCCGCGAGAGAAGC
TGTGGGCTCAGACAATGATTTTCGCGTGCGACGTCACTGACAAGTCAGTC
ACAACGTCAACGAATGAGGGTAAGTCGCCGTATGAACTGTGGTTCGGAAA
ACCCCCTACTGCCAGTCATTTGCGACCGTTTGGAGCGGTGGGATACGCGC
GACAGAGCGTGCGCGAACATAAGATGGCGCCAAAAGGGGAGAAATGCGTG
TTCATGGGAATTCCCCGAAACTTCCCCACTGGCTCGGTAAGCGCGCTACT
CGTAAGGTCAAGAAATATCGTGGAAAGGCAGACCGCGTTTTCGGAAGACG
AGCGCGAGCAGCAGCATGAGGAAGGGGGAGCGGAAGCTGCATCAGGGTCG
GCAAGTTTGGAGGGACCGACCGTACCCGCGCTGCGAAAGCTCGCCATCGA
CGGCAATGTCCCACCCATACTGTCATCACGTACAAGGAGTCGAAAACCCC
ACACCGGTGTGGAGAGGGAAGCGTTGCACTGTTTCTTGCCGGCGATTGAG
GCCGAAAAGGAAAACGGCGTGGAAGATGTGTTGGCATGCGACGACGGGGG
CCAGATGGCTATGCAAGCGACGCTAGATGTACCGGAACCGAGAAATCGGC
GACAGGCGATGGAATCGCATGAATGGGAAGAATGGCGGAAGGCAGAAGAG
ACTGAGATGCTTGGAATGGCCGAGAATTGCGTTTATAATCAGGTGGCTCG
GCCGAAGGATAAGCTCGCGTTTTCGGAAGACGAGCGCGAGCAGCAGCATG
AGGAAGGGGGAGCGGAAGCTGCATCAGGGTCGGCAAGTTTGGAGGGACCG
ACCGTACCCGCGCTGCGAAAGCTCGCCATCGACGGCAATGTCCCACCCAT
ACTGTCATCACGTACAAGGAGTCGAAAACCCCACACCGGTGTGGAGAGGG
AAGCGTTGCACTGTTTCTTGCCGGCGATTGAGGCCGAAAAGGAAAACGGC
GTGGAAGATGTGTTGGCATGCGACGACGGGGGCCAGATGGCTATGCAAGC
GACGCTAGATGTACCGGAACCGAGAAATCGGCGACAGGCGATGGAATCGC
ATGAATGGGAAGAATGGCGGAAGGCAGAAGAGACTGAGATGCTTGGAATG
GCCGAGAATTGCGTTTATAATCAGGTGGCTCGGCCGAAGGATAAGCTCAA
ATACAAGTGTCGACTTGTCGCTCAAGGGTTTTGGCAGGTGGAAGGTGTAC
ACTACACGGAAAAGTACTCGCCCACACCATCAATCGCGTCAATCCGGATG
CTTTTGGCGACGGCAGCGGCCAAGGATGGAGAGCTGCGCCATTTCGACGC
AGAGCAGGCATTTTTGAAGGCGGATATTGACGAAGAGACATACATAGAGA
TCCCCGAGGAGTTCCAGGAGTTTCCGGGGGCAGTGGGACGGCTTAATGAG
GCCATTTACGGACTCGTGCAGGCGGGGAGGTGCTGGAATAATAAGTTCTG
TGACGACATGACGGCGATTGAATTCGAGCAGGCAAAGGCGGACCCGTGCG
TGTTCCGCAAGGTCGTTGACGGCGAGGCGGAGATAGTGGTGGTCGTACAC
GTAGACGACAGCCTTGCCCACGCCAAAGACCAAGCGACGATGGATAGATT
CGCGGCCGAGCTTGGGCAGAAGTTTAAGTTGAAGGACATGGGGTACGCTG
AGTACTACATGGGTTGTCACATCACCAGGAACCGCAAGGCACGCGAATTA
AAGTCCGACCAACACCTGTACTTGGAGTCAATGGTAAAGAGATTTGACGT
CAAGAAGGAAGCTAAAATACCGGCTGCGTCGGGGAAATACAAGTGTCGAC
TTGTCGCTCAAGGGTTTTGGCAGGTGGAAGGTGTACACTACACGGAAAAG
TACTCGCCCACACCATCAATCGCGTCAATCCGGATGCTTTTGGCGACGGC
AGCGGCCAAGGATGGAGAGCTGCGCCATTTCGACGCAGAGCAGGCATTTT
TGAAGGCGGATATTGACGAAGAGACATACATAGAGATCCCCGAGGAGTTC
CAGGAGTTTCCGGGGGCAGTGGGACGGCTTAATGAGGCCATTTACGGACT
CGTGCAGGCGGGGAGGTGCTGGAATAATAAGTTCTGTGACGACATGACGG
CGATTGAATTCGAGCAGGCAAAGGCGGACCCGTGCGTGTTCCGCAAGGTC
GTTGACGGCGAGGCGGAGATAGTGGTGGTCGTACACGTAGACGACAGCCT
TGCCCACGCCAAAGACCAAGCGACGATGGATAGATTCGCGGCCGAGCTTG
GGCAGAAGTTTAAGTTGAAGGACATGGGGTACGCTGAGTACTACATGGGT
TGTCACATCACCAGGAACCGCAAGGCACGCGAATTAAAGTCCGACCAACA
CCTGTACTTGGAGTCAATGGTAAAGAGATTTGACGTCAAGAAGGAAGCTA
AAATACCGGCTGCGTCGGGGGGCTGTGGACTTTGCATGGAAGCATATACG
GACTCGGACTTCGGAGCCTGCCTGGACACAAGATGGTCGGTTTCAGGTGC
GGTGTTGATGTTGGCCAAGGGAGCGATCAGTTGGCACTCAAGGATGCAAG
AAGAAACAGCATCAGGTACCTCAGAGGCAGAGTACGTTGCCTTATCAGAG
GTAGTAAGATATGTACTATTTTTGAGACAGGTGCAGGAGTTCATGGAACC
GTCGATGAGGGTCGGTGCGGCAAATGTGTTTGAAGATAATGAGGGGGCCA
TCAAGCTGGCCACAAACAACCATGCTAGCCGTAGGACTAAGCATATTGAT
GTGAAGCATCATCTAGTAGGCTGTGGACTTTGCATGGAAGCATATACGGA
CTCGGACTTCGGAGCCTGCCTGGACACAAGATGGTCGGTTTCAGGTGCGG
TGTTGATGTTGGCCAAGGGAGCGATCAGTTGGCACTCAAGGATGCAAGAA
GAAACAGCATCAGGTACCTCAGAGGCAGAGTACGTTGCCTTATCAGAGGT
AGTAAGATATGTACTATTTTTGAGACAGGTGCAGGAGTTCATGGAACCGT
CGATGAGGGTCGGTGCGGCAAATGTGTTTGAAGATAATGAGGGGGCCATC
AAGCTGGCCACAAACAACCATGCTAGCCGTAGGACTAAGCATATTGATGT
GAAGCATCATCTAGTA
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