prot_F-serratus_M_contig643.17354.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig643.17354.1
Unique Nameprot_F-serratus_M_contig643.17354.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length313
Homology
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BLAST of mRNA_F-serratus_M_contig643.17354.1 vs. uniprot
Match: A0A6H5JGC6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGC6_9PHAE)

HSP 1 Score: 186 bits (471), Expect = 1.210e-51
Identity = 88/145 (60.69%), Postives = 109/145 (75.17%), Query Frame = 0 
Query:   37 YDNNSMPTGASLLLCLMGSVALLVSAAYLRASFRHERETKLSAYEQTVAEWTKFRPTFARLHINVTAHFGVAPVNTTNPDLDPDPPHPGARIGLRRSVDPDPIRDEEGPDGGLPDYKPLKYNQGIAPAPWRTAPRYPQPEDSEEE 181
            Y+N   P   S LL ++G  AL ++A YLRAS  H+RE K+SAYE+T++EWT FRPTFARL INVTAHFGVAPVNTT+P LDP+PP PG  + L  S D DPI DEEG  GGLP+Y PLK  +G+AP PWRTA R+P P+++ +E
Sbjct:   36 YENEGPPAAVSFLLIILGIAALCIAAVYLRASTLHDREIKISAYEETISEWTAFRPTFARLSINVTAHFGVAPVNTTSPGLDPNPPPPGTPLALAVSEDADPIHDEEGDAGGLPNYVPLKLERGVAPPPWRTARRFPPPQENSQE 180
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig643.17354.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JGC6_9PHAE1.210e-5160.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 45..65
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 66..313
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..44
NoneNo IPR availableTMHMMTMhelixcoord: 43..65

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig643contigF-serratus_M_contig643:255409..262937 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig643.17354.1mRNA_F-serratus_M_contig643.17354.1Fucus serratus malemRNAF-serratus_M_contig643 255409..262942 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig643.17354.1 ID=prot_F-serratus_M_contig643.17354.1|Name=mRNA_F-serratus_M_contig643.17354.1|organism=Fucus serratus male|type=polypeptide|length=313bp
MPSNSKTDGDGAGNLLSAQETGEQEGEASTWRYDYSYDNNSMPTGASLLL
CLMGSVALLVSAAYLRASFRHERETKLSAYEQTVAEWTKFRPTFARLHIN
VTAHFGVAPVNTTNPDLDPDPPHPGARIGLRRSVDPDPIRDEEGPDGGLP
DYKPLKYNQGIAPAPWRTAPRYPQPEDSEEEVGEESEESEAEAATGTDPP
SETNTQNDAGAHGDDGSGERQRRGLWWGAGDGGNKIEEDQGGAARDLPDR
FVPASGFYDAPSVRFVFTAKLNPPAARGRRKRKKGNDKSNSKGGDQGQGQ
GQHRLDEVKSQKE
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