mRNA_F-serratus_M_contig641.17328.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig641.17328.1 vs. uniprot
Match: D7G8W8_ECTSI (Cleavage and polyadenylation specificity factor CG10110-PA n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8W8_ECTSI) HSP 1 Score: 1308 bits (3384), Expect = 0.000e+0 Identity = 1001/2131 (46.97%), Postives = 1139/2131 (53.45%), Query Frame = 1
Query: 1 MTSTAIYTCYRQLHPPTGVDHAVFGSVTAPNSHDLVVAKASILELYRVHRDPSPSSPTGVGGVSPQGDASTGA-----GAGYFLELVGTFPIAGNITALAVIPVERSTAPSTQQQRDILVVSFDFAKTALVAYDSTLGRMSTLSIHNFDPDAIGPGSGGVEPSYGLASALKDRPSTIYSCDPAGRCLSAVVAGCLLVVLPTLRHVPPTVFLSEEAKKRVLLPRRHGRRRNPEVQNDNADLEVEGAAVVEATEAAVEGANQDRSNGKGLRDDYGGXXXXXXXXXXXXXEAEQDAG---GAFAFDDSRASRVRPTVSKPFTLDLEAVGVTGFIKAAVFLEGFHEPALALLYEPIQTCPGRLASMRSTCRLLLLSLNLVQGRAPVIWRVDNLPHDSWDLVAVPAPFGGVQVISTNAVIHVNDSEVLSILAVNGYARATVEDALLGCPLRASSGDWDWASFRHSRSALEVVDLSSYDVCVELDVMSCAFVTPTSMLLSLKGGEVYALRLHVSP-------GLGCG------VLGASGRVVGQSMRPIGRATPCSALAVSARGSDGGGSDGDGDSAGPSTGLVFMGSRVGDSLLVDYEVAMCGARSGGRGGSTAAVAAKHEPKEEAGGAVRARTIAEERRGEVGEAPVQAGEGARSPXXXXXXXXXX----------------------------TSGGAEXVXXXXXXSALPGGASRSLGGDDGN--DDADVSGREKSEGRTLARGGADSGKGNAGETHSSAVASAMETETRPSEERGAPEGSAAGMEAATDGSSKDSDPRVEESDAEGQRKKRVRDEALRERSGSGAQEKMVGVDGGEGGEEANGAAEPPRKGKKLCVSTSETKLAAPKIESEEAGSERTVVVSATPGTGSHDDRDESMNDASLPLTGSTRLSDA---GTSPAEEKGRQQKGAAA---ATTAEHALRGEGNPSTVGVVWDRKPSSSTQGPSVSSSRDNKVPLEDRETIAEEEELYGTVLGTEP-EGAGGGGRE--LSRLGSRYGERVVEAVGFRLKVVDSLCTLGPIVDAALVPSAYHVPRAAIAPGXXXXXXXXXXXXXXXXARGGKGGRTRSPSPLPXXXXPPLERGTSGGGIRTTLVCAAGYGQQGSLAVFSAGLRTEVVVDLAVPGATGVFAAPEGVIGEGESRGDTLVLVSSSPLIEQRASAGXXXXXXXXXXXXKADGKGHTRVLAFEDDLRVVELVPESDGNPFVCDAATVDLCAMAGSTIVQAHAQGLRVTRRREFVQEVLAAEDREMDGLGAGPDVTVLKAAAAGAFACCLLSNSYLHLMALEAGEPEEADLMPVGVWEEDDSKADNGGGSSAEGVWTDVEAMCMFGVRPSGARGFATAGPSAEQ----TKGWWGGDAWGEDLYSSSGDGACGGCEQTAST------------YLVVCRKEGALEIHACQGRGKEAT-TRTVFRASKAVLAPSTLWNELLLVPSPTAPYLSESESDLEALSLTANGDAVPPGGDDAGVGDDRRWSSPTGDDGXXXXXXXXXXXXVATGVVAADGRRLERAAASNGSASSRSIGRETAA-HSEPMEVE-------SPRRDTTRTPGANLAP----EGGGGDEDD----------GVVCPAVSDVLVHPVGAVDGPSALRRLILVMHLDNGDLLVYQARMTSREGGSARGGGREQVICFSKLSHDLITRPVKGVPPEAAVPDPSRGRALRGVRSAVGQEGICFARPGCRSALILAERGAVCVTPIAQDDLGDGSGSPPLPPGAPPSWAGVGLGSLAPLNKRNAFPGGGFAAVTAGGGRLRFISAAPASAQLVTPGTSGGGGLXXXGQGHFVAAKIELGATVHGVLHLPHELAQPGKMGDILKSLLLKRGHYAVLVSKMEDTLAEQPL------EEEEQDDGDPADGVDEEVEGPLARHAVKHKNWTVADPALGGAPQLLVHRFELRVLALAPGVAAAHSPSKGFHRDTEGVDGSTEGDRGREDSRDDDSGSMGRGGIGVDGGGVSVPGE-----VLSASTVETHPFDADENALCMSLVRLEQGGFPRMHVAVGTGMNDAQGEDKAARGRLILFEVDYAYLAKEDGGHEHAVKLRQVFAKEQLGPIAGESG---PVSAISQLGWHLIL 6054
MTSTAIYTCYRQLHPPTGVDHAVFGSVTA S DLVVAKAS LELYRVHRD +GY+LEL GTFP+AGNITALAVIP DILVVSF AK ALVAYDS LGR+ T+SIHNFD AIGPG+GGVE YGLA+ALKDRP TI S DPAGRCL+AVVAGC LVVLP RHVP +VF+SEEAK+ A E+A G XXXX E E+D G GA A D A VSKPFT+DLE G+TGFIKAA FLEGFHEPALALLYEPIQTC GRLAS RSTCRL LLS+NL QGRAPVIW+V+NLPHDSWDLV VP+P GG+QVISTNAV+HVN SEV SILAVNGYARATV+ ALL CPLR DW W SFR S EVVDLSSYDVC+ELDV+ CAF+TPTSMLLSL+ GEVYALRLH++ GC G RVVGQSMRP+GRA+PCS LAV+ S GLVFMGSRVGDSLLVDY VA G R GG+G A K EPK E XXXXXXXXXX T G + ++RS GGD DAD G+ SE + GGA+ +A T P E G DGS + +AE D+ E +G G G GG G AE P G + ++ + +R+ V + G + D + + ++P T T + A G +PA ++GA A A G P+ D P +LYG +G EGA G G E L+RLGS+ GERV+EAVGFRLKVVDS+CTLGPIVDAALVPSAYHVP+ GXXXXXXXXXXXXXXXX XXXX GIRT+LVCAAGYG QGSLAVFSAGLRTEVVV+L+VPGATGV+++ EG XXXXXXX GHTRVLAFE+D +VVEL PE DGNPFVCDAAT D+C+MAG T+VQAH QGLRVTR R+ VQ+VLA+ED ++ GLGA VTVL+AAAAG+ ACCLLSN LHLMAL+ G DLMPVG EE + + GGG VW +VEA+CMFGV+ G+ G + E+ KGWWGG AWGE S S A G + A + Y+VVCR+ G +E+ +C+G G E T R VFRA+ A LAP TLWNELLL XXXXXXXXXX VATG++ A+GRR + G TAA S+PMEV+ S D + + A AP E G D VVCPAV+DV+VHPVGAV GP LRRL+L MHLDNG LLVY+ARM A GGREQV+CFSKLSHDLITRPVKGVPPEAA+ DP RGRALRGVRSA GQEG+CFARPGCRSAL GHFVA K+ LGATVHG++HLPH+LA GK GDILK LL RGHY LVS MED L QP EE EQ DGD E G L RH VKHKNWTVADP+LGGAP LLV RFELRVLALAPG +A + S GRG DG SVPG +LSA+ VE+HP D+DEN +CM+LVRLEQGG PRM+VAVGTGMN+ QGEDKAARGRLIL EVDYAYLA+EDG HEHAVKLRQVFAKEQLGP++GE P S +HL+L
Sbjct: 1 MTSTAIYTCYRQLHPPTGVDHAVFGSVTAAGSRDLVVAKASTLELYRVHRDDHSXXXXXXXXXXXXXXXXXXXXXXXXASGYYLELAGTFPLAGNITALAVIP-------------DILVVSFGVAKMALVAYDSVLGRLETISIHNFDAGAIGPGAGGVESGYGLAAALKDRPRTISSSDPAGRCLAAVVAGCQLVVLPARRHVPGSVFVSEEAKRXXXXXX---------XXXXXXXXXXXXXXAAGAGESAAGGVAXXXXXXXXXXXXX--XXXXSVSARESDSEGEEDGGLGNGATAKGDGGAGG-NLAVSKPFTIDLEEAGITGFIKAAAFLEGFHEPALALLYEPIQTCAGRLASKRSTCRLALLSINLTQGRAPVIWQVENLPHDSWDLVPVPSPIGGLQVISTNAVMHVNQSEVRSILAVNGYARATVDPALLECPLRGGDSDWGWTSFRRSHPEREVVDLSSYDVCIELDVVRCAFLTPTSMLLSLRTGEVYALRLHLTTVTAAAADAAGCSRPPGGAAFGTPNRVVGQSMRPVGRASPCSVLAVAXXXXXX-----XXXXXXASKGLVFMGSRVGDSLLVDYSVASAGTRPGGKG----AAVPKREPKAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTLAGMQVDANVGSGDGSAAMSTRSPGGDGKKVAGDADADGKP-SEITETSGGGAE-------------IADGPGAVTSPPIENG------------NDGSPDPPAATPTKQEAEALSSSPQPDDG--EEAGEGKDA------GSRGGSAKRGRAERPSSGGDVGAGDNDG----------QPDKKRSRVSACADG-----EDDAASSGEAVPATEETTATAAAAVGGAPASTAVGGEEGAEALGDGVAAPTVSSESGRPAAADAAIDPTPXXXXXX------XXXXXXXXXXXXXXXXXQLYGARIGASASEGADGSGGEAALARLGSKDGERVIEAVGFRLKVVDSICTLGPIVDAALVPSAYHVPKTTKLAGXXXXXXXXXXXXXXXXXX----------XXXXXXXXXXXXXXXXXXGIRTSLVCAAGYGGQGSLAVFSAGLRTEVVVELSVPGATGVYSSSEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDTRA-----GHTRVLAFEEDAKVVEL-PEGDGNPFVCDAATADVCSMAGGTVVQAHKQGLRVTRNRDPVQDVLASEDPDLGGLGADAGVTVLRAAAAGSHACCLLSNLRLHLMALDDG-----DLMPVGSVEEAGEEGEGGGG-----VWEEVEAVCMFGVQKGGSVGEQSPERYEEEGLPAQKGWWGGSAWGEAGGSGSEPTAPGDDGEEAGSSNGEARVEHVRAYVVVCRRGGTVEVFSCEGEGAEETRARPVFRATGAALAPPTLWNELLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------------XXXXXXXXXXXXXXXXXXXXLAVATGIILANGRRGAAGRGGGKKVDGEANGAGTAAPSSDPMEVDDGATAPDSAAVDASASGEAPSAPDETVEKAGADAGXXXXXXXXXXXSVVCPAVTDVIVHPVGAVGGPPELRRLVLAMHLDNGSLLVYEARMVVSP--LAAFGGREQVVCFSKLSHDLITRPVKGVPPEAALFDPGRGRALRGVRSAAGQEGVCFARPGCRSAL-----------------------------------------------------------------------------------------------GHFVAEKVRLGATVHGLVHLPHDLAHAGKTGDILKQLLRARGHYVALVSTMEDALVAQPKSGLKEGEEGEQGDGDXXXXX--EAAGLLDRHTVKHKNWTVADPSLGGAPPLLVPRFELRVLALAPGAVSAXXXXXXXXXXXXXXXXXXXXXXXXTPEEGEGRRSGGRG---QDG---SVPGNEAEALMLSAAVVESHPMDSDENGVCMTLVRLEQGGAPRMYVAVGTGMNEPQGEDKAARGRLILLEVDYAYLAREDGKHEHAVKLRQVFAKEQLGPVSGEWSIFFPFSTSLPEVFHLVL 1899
BLAST of mRNA_F-serratus_M_contig641.17328.1 vs. uniprot
Match: D7G8W9_ECTSI (CPSF_A domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8W9_ECTSI) HSP 1 Score: 442 bits (1137), Expect = 1.790e-138 Identity = 212/245 (86.53%), Postives = 232/245 (94.69%), Query Frame = 1
Query: 6079 NRWDPKTRTLELIGFYDARVYVIGLSVIKNRFILVGDAYGSVQLVVWREDDHTLTQLSKDHEKCEVFAAEYLVDEPGMGIVVADGRRNLKVLQYAPKAPNSRGGTMLLCQSDFFLGSRVAKLTRRRTRGNLRGGARYCLLAGTLDGGLGAILPVDERIFRRLYALQGIMSNALGHTGSANPRAYRLFDRGPTFRYETKQNMLDGTLLWRFVGLDARTQNDLTRAIGTTVERVMSNLLDIDLASLF 6813
+RWDPKT TLELIGF+D RVYV+ LSVIK++FILVGDAYGSVQLVVWRE+DH+LT LSKDHE C+VF+AEYL+DEPGM IVVADGRRN+KVLQYAP A NSRGGT LLCQSDF+LGSRV KLTRRRTRGNLR GARYCLLAGTLDGGLGA+LPVDER+FRRLYALQGIMSNALGH G+ANPRAYRLFD GPTFRYETKQNMLDG+LLWRFVGLDA+TQ+DLTRAIGTTV+RVM+NLLDIDLASLF
Sbjct: 11 SRWDPKTCTLELIGFHDPRVYVMSLSVIKHKFILVGDAYGSVQLVVWREEDHSLTALSKDHEDCQVFSAEYLIDEPGMAIVVADGRRNVKVLQYAPNATNSRGGTKLLCQSDFYLGSRVGKLTRRRTRGNLRDGARYCLLAGTLDGGLGAVLPVDERVFRRLYALQGIMSNALGHNGAANPRAYRLFDHGPTFRYETKQNMLDGSLLWRFVGLDAKTQHDLTRAIGTTVDRVMANLLDIDLASLF 255
BLAST of mRNA_F-serratus_M_contig641.17328.1 vs. uniprot
Match: A0A835Z873_9STRA (Cleavage/polyadenylation specificity factor, A subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z873_9STRA) HSP 1 Score: 239 bits (609), Expect = 3.460e-67 Identity = 116/268 (43.28%), Postives = 171/268 (63.81%), Query Frame = 1
Query: 6007 SGPVSAISQLGWHLILSVGKKVIVNRWDPKTRTLELIGFYDARVYVIGLSVIKNRFILVGDAYGSVQLVVWREDDHTLTQLSKDHEKCEVFAAEYLVDEPGMGIVVADGRRNLKVLQYAPKAPNSRGGTMLLCQSDFFLGSRVAKLTRRRTRGNLRGGARYCLLAGTLDGGLGAILPVDERIFRRLYALQGIMSNALGHTGSANPRAYRLF----DRGPTFRYETKQNMLDGTLLWRFVGLDARTQNDLTRAIGTTVERVMSNLLDID 6798
+GPV A++Q+ ++ + + + WDPK+ +L +G Y+A YV+ +SV+K F+++GD SVQ ++WR++D ++ QL+KD+E +V+A +LVD+P +GIVV D N+K+L+YAP+ SRGG L+C +DF +G+ V +R R N R+ G LDG + + P++ER FRRLYALQG+M NAL H NPR RLF + +LDG LLWRFV L A+ Q +LTRAIGTTV+ V+ +LLD+D
Sbjct: 3 AGPVGAVAQISRYVATAAAASITILEWDPKSDSLRPVGIYEASQYVVTMSVVKT-FLVLGDVMNSVQFLMWRDEDRSINQLAKDYEPTQVYATVFLVDQPSLGIVVGDSSGNIKILRYAPQLLASRGGHRLVCDADFHIGAPVGAFGPQRLRNNKLNAPRFGAAVGGLDGSVALLAPLEERAFRRLYALQGVMCNALEHGAGVNPRGARLFRSQLPAAAAAEGGRMKGVLDGALLWRFVSLPAQVQCELTRAIGTTVDAVLLSLLDVD 269
BLAST of mRNA_F-serratus_M_contig641.17328.1 vs. uniprot
Match: A0A662X1P8_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X1P8_9STRA) HSP 1 Score: 250 bits (638), Expect = 8.680e-63 Identity = 237/799 (29.66%), Postives = 370/799 (46.31%), Query Frame = 1
Query: 4579 VSDVLVHPVGAVDGPSALR---RLILVMHLDNGDLLVYQARMTSREGGSAR--GGGREQVICFSKLSHDLITRPVKGVPPEAAV---------PDPSRGRALRGVRSA-----------VGQEGICFARPGCRSALILAERG-----AVCVTPIAQDDLGDGSGSPPLPPGAPPSWAGVGLGSLAPLNKRNAFPGGGFAAVTAGGGRLRFISAAPASAQLVTPGTSGGGGLXXXGQGHFVAAKIELGATVHGVLHLPHELAQPGKMGDILKSLLLKRGHYAVLVS-KMEDTLAEQPLEEEEQDDGDPADGVDEEVEGPLARHAVKHKNWTVADPALGGAPQLLVHRFELRVLALAPGVAAAHSPSKGFHRDTEGVDGSTEGDRGREDSRDDDSGSMGRGGIGVDGGGVSVPGE----VLSASTVETHPFDADENALCMSLVRLEQGGFPRMHVAVGTGMNDAQGEDKAARGRLILFEVDYAYLAKEDGGHEHAV--KLRQVFAKEQLGPIAGESGPVSAISQLGWHLILSVGKKVIVNRWDPKTRTLELIGFYDARVYVIGLSVIKNRFILVGDAYGSVQLVVWREDDHTLTQLSKDHEKCEVFAAEYLVDEPGMGIVVADGRRNLKVLQYAPKAPNSRGGTMLLCQSDFFLGSRVAKLTRRRT-------RGNLRGGAR---YCLLAGTLDGGLGAILPVDERIFRRLYALQGIMSNALGHTGSANPRAYRLFDRGPTFR---------YETKQNMLDGTLLWRFVGLDARTQNDLTRAIGTTVERVMSNLLDIDLAS 6807
V+D+++H VG +G + R+++++ L NGDLL+Y A T + G +R GG V F ++ DLITRP +PP A P+ + L +R+ V F R G IL++RG +CV + +G+G +PP A V + S P + N P G + G LR + + P +SGG FV K E GAT+H +L+L + PG + + L++ YAV+ S KM+ AE+ E EE ++ + VD + P+ + + + L +ELR++ + ++ G GR G+ V E VLS + + + + + E R ++ +GTG GED++ RGRL+L+E+DYA KE+GG KLR VF KE G +S ++QLG +++ +VG K+IV ++ K+ L FYDA+++++ LSV+++ F++ GD + SV + W+E LT L+KD+E V E+ V E + ++ D NL V+Q+AP+ SRGG LL SDF LG +VA + R+R R N R A Y + G +GG+GA++PV ER+FRRL+ LQ +M N L + NPR +R+ R ++ K++ LD +L+RF+ LD Q +L R IGTT E V+ NLL++ A+
Sbjct: 1065 VADIVIHRVGPSEGQHNAQYFARMVMLVFLANGDLLMYAA--TPKPGSKSRNAGGTSAPVFQFVRVGTDLITRPF--LPPRARTNAHHETGNNPEANTSAILAKLRAGFRYPMLTCFDNVNNMSGAFFR-GAHPMWILSDRGHPSFIPMCVAGSSPPPRANGNG---VPPKANVPKVSVPVLSFTPFHHWNC-PNGFIYFHSRGA--LRVCELPSSKTSTILP-SSGG----------FVLQKAEFGATLHHMLYLGNH--GPGGVSEALEAPT-----YAVVCSVKMKPADAERATENEEGEEEQEPENVDANGQ-PIGSNVMAPTAEMFPELELEQMANTEEDVYELRLV------------------------------------QTNEFGDWGRNGV------FRVHFERYEVVLSVKLMYLYDSSLMKEEVASNSP--EWNKKKRPYLVIGTGCVGPHGEDESGRGRLLLYELDYAQYVKEEGGTTSGKLPKLRLVFIKEH------RQGAISMVAQLGPYVLAAVGSKLIV--YEFKSEQLIGCAFYDAQMFIVSLSVVRD-FVMYGDVFKSVHFLRWKEKQRQLTLLAKDYEPLAVSTTEFNVFEKKLALLAVDMDENLHVMQFAPQDIESRGGQRLLRTSDFHLGVQVASMFRKRVDTGGQMVRTNGRASAPPGYYVNVLGNSEGGVGALIPVGERVFRRLFTLQNVMINTLPQNCALNPREFRMLKTNAQRRCGRPDAWSKHKWKKSFLDAFVLFRFLRLDYVAQKELARCIGTTPEVVIHNLLEVQRAT 1780
BLAST of mRNA_F-serratus_M_contig641.17328.1 vs. uniprot
Match: A0A833S4Z4_PHYIN (CPSF A subunit region n=2 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833S4Z4_PHYIN) HSP 1 Score: 241 bits (615), Expect = 3.910e-60 Identity = 238/803 (29.64%), Postives = 357/803 (44.46%), Query Frame = 1
Query: 4579 VSDVLVHPVGAVDGP---SALRRLILVMHLDNGDLLVYQARMTSREGGSARGGGREQVICFSKLSHDLITRPVKGVPPEAAV---------PDPSRGRALRGVRSA-----------VGQEGICFARPGCRSALILAERGAVCVTPIAQDDLGDGSGSPPLPPGAPPSWA---GVGLGSLAPLNKRNAFPGGGFAAVTAGGGRLRFISAAPASAQLVTPGTSGGGGLXXXGQGHFVAAKIELGATVHGVLHLPHELAQPGKMGDILKSLLLKRGHYAVLVSKMEDTLAEQPLEEEEQDDGDPADGVDEEVE--------GPLARHAVKHKNWTVADPALGGAPQLLVHRFELRVLALAPGVAAAHSPSKGFHRDTEGVDGSTEGDRGREDSRDDDSGSMGRGGIGVDGGGVSVPGE----VLSASTVETHPFDADENALCMSLVRLEQGGFPRMHVAVGTGMNDAQGEDKAARGRLILFEVDYAYLAKEDGGHEHAV--KLRQVFAKEQLGPIAGESGPVSAISQLGWHLILSVGKKVIVNRWDPKTRTLELIGFYDARVYVIGLSVIKNRFILVGDAYGSVQLVVWREDDHTLTQLSKDHEKCEVFAAEYLVDEPGMGIVVADGRRNLKVLQYAPKAPNSRGGTMLLCQSDFFLGSRVAKLTRRR----------TRG-NLRGGARYCLLAGTLDGGLGAILPVDERIFRRLYALQGIMSNALGHTGSANPRAYRLFDRGPTFRY---------ETKQNMLDGTLLWRFVGLDARTQNDLTRAIGTTVERVMSNLLDIDLAS 6807
V+D+++H VG +G L R+++++ L NGDLL+Y A G V F ++ +LITRP +PP+A P+ + L +R+ V F R G IL +RG P+ S +PP G + A V + S P + N P G + G LR + + P +SGG FV K E GAT+H +L+L PG + + L++ YAV+ S L+ + D +G +EE+E PL + + AD +ELR++ + D+ G GR G+ V E VLS + + +D+ ++ E R ++ VGTG GED++ RGRL+L+E+DYA E+GG KLR VF KE G +S +SQLG +++ +VG K+IV ++ K+ L FYDA++Y++ LSV+K+ F++ GD Y SV + WRE L L+KD+E V A E+ V E + ++ D NL V+Q+AP+ SRGG LL SDF LG +V+ + R+R T G N + Y + GT +GG+GA++PV ER+FRRL+ LQ +M N L + NPR +R+ R + K++ LD +L+RF+ LD Q +L R IGTT E VM NLL++ A+
Sbjct: 944 VADIVIHRVGPSEGQHNAQYLSRMVMLVFLANGDLLMYSAAPKFESLKPRANGEIAPVFHFVRVGTELITRPF--LPPKARTNAHNEAGNNPEVNTSAVLAKLRAGFRYPMLTCFHNVNNMSGAFFR-GAHPMWILGDRGHASFVPMCVP-----SSAPPKANGTSKNAAPRVSVPVLSFTPFHHWNC-PNGFIYFHSRGA--LRVCELPSSKTSTILP-SSGG----------FVLQKAEFGATLHHMLYLGSH--GPGGVAEALEAPT-----YAVVCSAR--------LKPADADRATEVEGAEEELEPENLDPNGNPLGSNVMAPTAEMFADYETDHMAHTEEDVYELRLV------------------------------------QTDEFGEWGRRGV------FRVHFERYEVVLSVKLM--YLYDSSLMKEEVASTSPEWNKKKRPYLVVGTGWVGPHGEDESGRGRLLLYELDYAQYVNEEGGATSGKLPKLRLVFIKEH------RQGAISMVSQLGPYVLAAVGSKLIV--YEFKSEQLIGCAFYDAQMYIVTLSVVKD-FVMYGDVYKSVHFLRWREMQRQLVLLAKDYEPLAVSATEFSVFEKKLALLAVDMDENLHVMQFAPQDIESRGGQRLLRVSDFHLGVQVSSMFRKRVDASGSVVSATNGRNAAPLSNYVNVMGTSEGGVGALVPVGERVFRRLFTLQNVMVNTLPQNCALNPREFRMLKTNAQRRCGRPDAWSKKKWKKSFLDAFVLFRFLQLDYVAQKELARCIGTTPEVVMHNLLEVQHAT 1656
BLAST of mRNA_F-serratus_M_contig641.17328.1 vs. uniprot
Match: A0A484E9Q8_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E9Q8_BRELC) HSP 1 Score: 237 bits (604), Expect = 8.430e-59 Identity = 237/802 (29.55%), Postives = 351/802 (43.77%), Query Frame = 1
Query: 4579 VSDVLVHPVGAVDGP---SALRRLILVMHLDNGDLLVYQARMTSREGGSARGGGREQVICFSKLSHDLITRPVKGVPPEAAVPDPSRGRALRGVRSAVGQE-------------------GICFARPGCRSALILAERGAVCVTPIAQDDLGDGSGSPPLPPGAPPSWAGVGLGSLAPLNKRNAFPGGGFAAVTAGGGRLRFISAAPASAQLVTPGTSGGGGLXXXGQGHFVAAKIELGATVHGVLHLPHELAQPGKMGDILKSLLLKRGHYAVLVS-KMEDTLAEQPLEEEEQDDGDPADGVDEEVEGPLARHAVKHKNWTVADPALGGAPQLLVHRFELRVLALAPGVAAAHSPSKGFHRDTEGVDGSTEGDRGREDSRDDDSGSMGRGGIGVDGGGVSVPGEVLSASTVETHPFDADENALCMSLVRLEQGGF---------------PRMHVAVGTGMNDAQGEDKAARGRLILFEVDYAYLAKEDGGHEHAV--KLRQVFAKEQLGPIAGESGPVSAISQLGWHLILSVGKKVIVNRWDPKTRTLELIGFYDARVYVIGLSVIKNRFILVGDAYGSVQLVVWREDDHTLTQLSKDHEKCEVFAAEYLVDEPGMGIVVADGRRNLKVLQYAPKAPNSRGGTMLLCQSDFFLGSRVAKLTRRRTRGNLRGGARYCLLA----------GTLDGGLGAILPVDERIFRRLYALQGIMSNALGHTGSANPRAYRLFD--------RGPTF-RYETKQNMLDGTLLWRFVGLDARTQNDLTRAIGTTVERVMSNLLDIDLAS 6807
V+D+++H VG +G S L R++L++ L NGDLL+Y A T + + F +++ +LITRP VPP+ +L SAV + CF R G IL RG C + + S PP + V + S P + N P G + G LR + + P +SGG FV K E GAT+H +L+L + PG + + L + YAV+ S +M+ AE E E DD + +D L + + +D L P +ELR++ ++ D GV H F+ E LC+ L+ L R ++ +GTG GED++ RGRL+L+E+DYA E+GG KLR VF KE G +SA++QLG +++ +VG K+IV ++ K+ L FYDA+++++ L+V+K+ FIL GD Y SV + WRE L L+KD+E V A E+ V E + ++ D NL VLQY P+ SRGG LL SDF LG +VA + R+R + G Y A GT +GG+ A++PV ER+FRRLY LQ +M N L + NPR +R+ RG + + + K++ LD +L++F+ LD Q +L R IGTT E V+ NLL++ A+
Sbjct: 1023 VADIVIHRVGPSEGQMNASYLARMVLLVFLANGDLLLYAATPTHDR---LQSRSSSPIFQFIRINTELITRPF--VPPKVRPSTHLNETSLETSTSAVVAKLRAGFRYPMLTKFYNVNTMSGCFFR-GAHPMWILGNRGHPCFVRMCVPNAAIKSPLVANQTTTPPRVS-VPVLSFTPFHHWNC-PNGFIYFHSRGS--LRVCELPSSKTSTILP-SSGG----------FVLQKAEFGATLHHMLYLGNH--GPGGVAEALVAPT-----YAVVCSLRMKPADAENATEVETVDDELETETLDANGNVLLGSNVMAPTTEMFSDLELSAFPHTEEDVYELRLV----------QTNEFREWDFRGV--------------------------------------------FRVH-FERFEVVLCIRLMYLFDSSLLHDEVASTSVEWHRKKRPYLVLGTGWVGPHGEDESGRGRLLLYELDYAQYVNEEGGATSGKLPKLRLVFMKEH------RQGAISAVAQLGPYVLAAVGSKLIV--YEFKSEQLIGCAFYDAQMFIVTLNVVKD-FILYGDVYKSVHFLQWRELQRQLLLLAKDYEPLTVSATEFSVFETKVALLAVDMDENLHVLQYLPQDIESRGGQRLLRVSDFHLGVQVASMFRKRVE--MAGAGAYTRKAAVLSCYVNVLGTSEGGIMALVPVSERVFRRLYTLQNVMINTLQQNCALNPREFRMLKTNGQQRCGRGDAWSKKKWKKSFLDAMVLFQFLTLDYVAQKELARCIGTTSEVVIHNLLEVQHAT 1730
BLAST of mRNA_F-serratus_M_contig641.17328.1 vs. uniprot
Match: G4Z3I9_PHYSP (Putative cleavage and polyadenylation specificity factor CPSF n=6 Tax=Phytophthora TaxID=4783 RepID=G4Z3I9_PHYSP) HSP 1 Score: 237 bits (604), Expect = 8.580e-59 Identity = 229/792 (28.91%), Postives = 357/792 (45.08%), Query Frame = 1
Query: 4579 VSDVLVHPVGAVDGP---SALRRLILVMHLDNGDLLVYQARMTSREGGSARGGGREQVICFSKLSHDLITRPVKGVPPEAAVPDPSRGRALRGVRSAVGQEGICFARPGCRSALILAERGAVCVTPIAQDDLGDGSGSPPLPPGAPPSW-------------------AGVGLGSLAPLNKRNAFPGGGFAAVTAGGGRLRFISAAPASAQLVTPGTSGGGGLXXXGQGHFVAAKIELGATVHGVLHLPHELAQPGKMGDILKSLLLKRGHYAVLVS-KMEDTLAEQPLEEEEQDDGDPADGVDEEVEGPLARHAVKHKNWTVADPALGGAPQLLVHRFELRVLALAPGVAAAHSPSKGFHRDTEGVDGSTEGDRGREDSRDDDSGSMGRGGIGVDGGGVSVPGE----VLSASTVETHPFDADENALCMSLVRLEQGGFPRMHVAVGTGMNDAQGEDKAARGRLILFEVDYAYLAKEDGGHEHAV--KLRQVFAKEQLGPIAGESGPVSAISQLGWHLILSVGKKVIVNRWDPKTRTLELIGFYDARVYVIGLSVIKNRFILVGDAYGSVQLVVWREDDHTLTQLSKDHEKCEVFAAEYLVDEPGMGIVVADGRRNLKVLQYAPKAPNSRGGTMLLCQSDFFLGSRVAKLTRRRTRG-------NLRGG----ARYCLLAGTLDGGLGAILPVDERIFRRLYALQGIMSNALGHTGSANPRAYRLFDRGPTFRY---------ETKQNMLDGTLLWRFVGLDARTQNDLTRAIGTTVERVMSNLLDIDLAS 6807
V+D+++H VG +G L ++++++ L NGDLL+Y A G V F ++ DLITRP+ +PP RA + G P ++ +LA+ A P+ + S GA P W V + S P + N P G + G LR + + P +SGG FV K E GAT+H +L+L + PG + + L++ YAV+ S KM+ T AE+ E E+ D+ + +D P+ + + D + +ELR++ + ++ G GR G+ V E VLS + + +D+ ++ E R ++ +GTG GED++ RGRL+L+E+DYA E+GG + KLR VF KE G +S++ QLG +++ +VG K+IV ++ K+ L FYDA+++++ L+V+K+ F++ GD Y SV + WRE L L+KD+E V A E+ V E + ++ D NL V+Q+AP+ SRGG LL SDF LG +VA + R+R G N RG + Y + G +GG+GA++PV ER+FRRL+ LQ +M N L + NPR +R+ R + K++ LD +L+RF+ LD Q +L R IGTT E V+ NLL++ A+
Sbjct: 1050 VADIIIHRVGPSEGQHNAQYLSQMVMLVFLANGDLLMYSATPKYESLKPRANGEVAPVFHFVRVGSDLITRPL--IPP----------RARTSAHNEAGNN------PEVNTSAVLAKLRAGFRYPMLTTFYNVNNMSGAFFRGAHPMWILGDRGQPTFIPMCSAAPKVSVPVLSFTPFHHWNC-PNGFIYFHSRGA--LRVCELPSSKTSTILP-SSGG----------FVLQKAEFGATLHHMLYLGNH--GPGGVSEALEAPT-----YAVVCSVKMKPTDAERATEVEDADEEKEPENLDANG-NPVGSNVMAPTAEMFPDFEIDQMAHTEEEVYELRLV------------------------------------QTNEFGEWGRRGV------FRVHFERYEVVLSVKLM--YLYDSSLMKEEVASTSAEWNKKKRPYLVIGTGWVGPHGEDESGRGRLLLYELDYAQYVDEEGGSTSSKLPKLRLVFIKEH------RQGAISSVVQLGPYVLAAVGSKLIV--YEFKSEQLIGCAFYDAQMFIVTLNVVKD-FVMYGDVYKSVHFLRWREMQRQLVLLAKDYEPLAVSATEFSVFEKKLALLAVDMDENLHVMQFAPQDIESRGGQRLLRVSDFHLGVQVASMFRKRVDGPGGHVAVNGRGPRAPPSYYVNVMGNSEGGVGALIPVGERVFRRLFTLQNVMVNTLPQNCALNPREFRMLKTNAQRRCGRPDAWSKKKWKKSFLDAFVLFRFLQLDYVAQKELARCIGTTPEVVIHNLLEVQHAT 1748
BLAST of mRNA_F-serratus_M_contig641.17328.1 vs. uniprot
Match: A0A7S1BI36_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BI36_9STRA) HSP 1 Score: 223 bits (567), Expect = 2.290e-58 Identity = 137/363 (37.74%), Postives = 201/363 (55.37%), Query Frame = 1
Query: 5824 MHVAVGTGMNDAQGEDKAARGRLILFEVDYAYLAKEDGGHEHAVKLRQVFAKEQLGPIAGESGPVSAISQLGW----HLILSVGKKVIVNRWDPKTRTLELIGFYDARVYVIGLSVIKNRFILVGDAYGSVQLVVWREDDHTLTQLSKDHEKCEVFAAEYLVDEPGMGIVVADGRRNLKVLQYAPKAPNSRGGTMLLCQSDFFLGSRVAKLTRRRTRGNLRGGA--------------------------RYCLLAGTLDGGLGAILPVDERIFRRLYALQGIMSNALGHTGSANPRAYRLFDR----GPTFRYETKQNMLDGTLLWRFVGLDARTQNDLTRAIGTTVERVMSNLLDIDLASL 6810
+ V VGTG+ D GED ++GR++LFEV KE+ + L ++K+ L GPV+ + L L++ G +V V +W K + L IGF+ A++ V G+++ K F+L+ DAY S+ +VWRE D +LT L+KD+E V+AA ++ P M V D R NL+ QYAP P SRGG L+C++D+ LG++ L R +L G+ R+ + GT+DGG GA+ PV+ER FRRLYALQG++ NAL +G+ N R +RLF R G E ++ +LDG LL R+ L Q ++ RAIGTTV+ +M NLL++D A +
Sbjct: 192 LFVVVGTGIVDQDGEDIGSKGRVLLFEVKKP---KENVNAASPLSLSLTYSKDIL------LGPVTVLEGLKTGNQTRLVIGAGAEVTVEQW--KDQQLTQIGFFHAQMQVQGVTMFKT-FMLLSDAYDSIHFLVWRESDKSLTLLAKDYEPTCVYAAGFINRGPTMYFVCHDDRENLQFFQYAPTDPASRGGNKLVCRADYHLGTQTTHLRTHLVRNSLLLGSATPATSWIALRHRDAMALRQEDPDCRRFGVHFGTVDGGFGAVFPVNERTFRRLYALQGVVGNALQQSGALNVRGWRLFQRTTQRGACRSGERQKGVLDGGLLMRYCQLGYFQQEEIARAIGTTVDMIMDNLLELDCARM 542
BLAST of mRNA_F-serratus_M_contig641.17328.1 vs. uniprot
Match: A0A2D4CF34_PYTIN (CPSF_A domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CF34_PYTIN) HSP 1 Score: 217 bits (552), Expect = 2.980e-58 Identity = 134/374 (35.83%), Postives = 199/374 (53.21%), Query Frame = 1
Query: 5779 LCMSLVRLEQGGFP----------RMHVAVGTGMNDAQGEDKAARGRLILFEVDYA-YLAKEDGGHEHAVKLRQVFAKEQLGPIAGESGPVSAISQLGWHLILSVGKKVIVNRWDPKTRTLELIGFYDARVYVIGLSVIKNRFILVGDAYGSVQLVVWREDDHTLTQLSKDHEKCEVFAAEYLVDEPGMGIVVADGRRNLKVLQYAPKAPNSRGGTMLLCQSDFFLGSRVAKLTRRRTRGNLRGGAR---------------YCLLAGTLDGGLGAILPVDERIFRRLYALQGIMSNALGHTGSANPRAYRLFDRGPTFR---------YETKQNMLDGTLLWRFVGLDARTQNDLTRAIGTTVERVMSNLLDI 6795
LC + E GGF + +V +GTG GED++ +GRL+L+E+DYA Y E KLR +F KE G +S +SQLG H++ +VG K+IV ++ K+ L FYDA++Y++ LSVIK+ +++ D Y SV + WRE L L+KD+E + A E+ V E + ++ D NL V+Q+AP+ SRGG LL SDF LG ++ + R+ T + A+ Y L G+ +G +GAI+ V ER+FRRL+ LQ +M N L + NPR +R+ R + K+ LDG +L+RF+ LD Q +L R IGTT E ++ NLL++
Sbjct: 3 LCDASQMKENGGFVATSADWYKRRKPYVVIGTGFVGPHGEDESGKGRLLLYELDYAQYTTAEGETSAKLPKLRLIFIKEH------HHGAISFVSQLGPHVLAAVGMKLIV--YEFKSDQLTACAFYDAQMYIVSLSVIKD-YVMYADVYKSVHFLRWREKQRQLQLLAKDYEPLAITATEFSVAEKKLALLAGDMEENLHVMQFAPQDIESRGGQRLLRTSDFHLGVQITSMIRKATGTSNPPAAQMAGHRKHQEQPSQSQYVTLLGSSEGSVGAIMAVGERVFRRLFTLQNVMINTLPQNCALNPREFRMMKSNGGRRTGRPDAWCKQKWKKGFLDGHVLFRFLHLDYVAQKELARCIGTTPEVIIHNLLEV 367
BLAST of mRNA_F-serratus_M_contig641.17328.1 vs. uniprot
Match: D0NYE8_PHYIT (Uncharacterized protein n=18 Tax=Phytophthora TaxID=4783 RepID=D0NYE8_PHYIT) HSP 1 Score: 234 bits (597), Expect = 5.690e-58 Identity = 233/790 (29.49%), Postives = 349/790 (44.18%), Query Frame = 1
Query: 4579 VSDVLVHPVGAVDGP---SALRRLILVMHLDNGDLLVYQARMTSREGGSARGGGREQVICFSKLSHDLITRPVKGVPPEAAV---------PDPSRGRALRGVRSAVGQEGI-CFARPGCRSALILAERGAVCVTPIAQDDLGDGSGSPPLPPGAPPSWAGVGLGSLAPLNKRNAFPGGGFAAVTAGGGRLRFISAAPASAQLVTPGTSGGGGLXXXGQGHFVAAKIELGATVHGVLHLPHELAQPGKMGDILKSLLLKRGHYAVLVSKMEDTLAEQPLEEEEQDDGDPADGVDEEVE--------GPLARHAVKHKNWTVADPALGGAPQLLVHRFELRVLALAPGVAAAHSPSKGFHRDTEGVDGSTEGDRGREDSRDDDSGSMGRGGIGVDGGGVSVPGE----VLSASTVETHPFDADENALCMSLVRLEQGGFPRMHVAVGTGMNDAQGEDKAARGRLILFEVDYAYLAKEDGGHEHAV--KLRQVFAKEQLGPIAGESGPVSAISQLGWHLILSVGKKVIVNRWDPKTRTLELIGFYDARVYVIGLSVIKNRFILVGDAYGSVQLVVWREDDHTLTQLSKDHEKCEVFAAEYLVDEPGMGIVVADGRRNLKVLQYAPKAPNSRGGTMLLCQSDFFLGSRVAKLTRRR----------TRG-NLRGGARYCLLAGTLDGGLGAILPVDERIFRRLYALQGIMSNALGHTGSANPRAYRLFDRGPTFRY---------ETKQNMLDGTLLWRFVGLDARTQNDLTRAIGTTVERVMSNLLDIDLAS 6807
V+D+++H VG +G L R+++++ L NGDLL+Y A G V F ++ +LITRP +PP+A P+ + L +R+ + CF S RGA + + D G S P S + S N N F G LR + + P +SGG FV K E GAT+H +L+L PG + + L++ YAV+ S L+ + D +G +EE+E PL + + AD +ELR++ + D+ G GR G+ V E VLS + + +D+ ++ E R ++ VGTG GED++ RGRL+L+E+DYA E+GG KLR VF KE G +S +SQLG +++ +VG K+IV ++ K+ L FYDA++Y++ LSV+K+ F++ GD Y SV + WRE L L+KD+E V A E+ V E + ++ D NL V+Q+AP+ SRGG LL SDF LG +V+ + R+R T G N + Y + GT +GG+GA++PV ER+FRRL+ LQ +M N L + NPR +R+ R + K++ LD +L+RF+ LD Q +L R IGTT E VM NLL++ A+
Sbjct: 1042 VADIVIHRVGPSEGQHNAQYLSRMVMLVFLANGDLLMYSAAPKFESLKPRANGEIAPVFHFVRVGTELITRPF--LPPKARTNAHNEAGNNPEVNTSAVLAKLRAGFRYPMLTCFHNVNNMSGAFF--RGAHPMWILG--DRGHASFVPMCNAAPRVSVPVLSFTSFHHWNCPNGF------IYFHSRGALRVCELPSSKTSTILP-SSGG----------FVLQKAEFGATLHHMLYLGSH--GPGGVAEALEAPT-----YAVVCSAR--------LKPADADRATEVEGAEEELEPENLDPNGNPLGSNVMAPTAEMFADYETDHMAHTEEDVYELRLV------------------------------------QTDEFGEWGRRGV------FRVHFERYEVVLSVKLM--YLYDSSLMKEEVASTSPEWNKKKRPYLVVGTGWVGPHGEDESGRGRLLLYELDYAQYVNEEGGATSGKLPKLRLVFIKEH------RQGAISMVSQLGPYVLAAVGSKLIV--YEFKSEQLIGCAFYDAQMYIVTLSVVKD-FVMYGDVYKSVHFLRWREMQRQLVLLAKDYEPLAVSATEFSVFEKKLALLAVDMDENLHVMQFAPQDIESRGGQRLLRVSDFHLGVQVSSMFRKRVDASGSVVSATNGRNAAPLSNYVNVMGTSEGGVGALVPVGERVFRRLFTLQNVMVNTLPQNCALNPREFRMLKTNAQRRCGRPDAWSKKKWKKSFLDAFVLFRFLQLDYVAQKELARCIGTTPEVVMHNLLEVQHAT 1740 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig641.17328.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig641.17328.1 >prot_F-serratus_M_contig641.17328.1 ID=prot_F-serratus_M_contig641.17328.1|Name=mRNA_F-serratus_M_contig641.17328.1|organism=Fucus serratus male|type=polypeptide|length=2272bp MTSTAIYTCYRQLHPPTGVDHAVFGSVTAPNSHDLVVAKASILELYRVHRback to top mRNA from alignment at F-serratus_M_contig641:151072..176067- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig641.17328.1 ID=mRNA_F-serratus_M_contig641.17328.1|Name=mRNA_F-serratus_M_contig641.17328.1|organism=Fucus serratus male|type=mRNA|length=24996bp|location=Sequence derived from alignment at F-serratus_M_contig641:151072..176067- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig641:151072..176067- >mRNA_F-serratus_M_contig641.17328.1 ID=mRNA_F-serratus_M_contig641.17328.1|Name=mRNA_F-serratus_M_contig641.17328.1|organism=Fucus serratus male|type=CDS|length=13632bp|location=Sequence derived from alignment at F-serratus_M_contig641:151072..176067- (Fucus serratus male)back to top |