mRNA_F-serratus_M_contig6375.17280.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig6375.17280.1
Unique NamemRNA_F-serratus_M_contig6375.17280.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig6375.17280.1 vs. uniprot
Match: D7FUV7_ECTSI (Mevalonate kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUV7_ECTSI)

HSP 1 Score: 282 bits (722), Expect = 1.180e-83
Identity = 195/392 (49.74%), Postives = 223/392 (56.89%), Query Frame = 2
Query:   26 RGQAKGDPPARV---FLALAIVPGIFVGKFCPAARGLSITAFSASLPIGAGLGSSAALCVATSAALMRTACLLSQGNDGRINVGNPRILHLSTEATERGETNTAXXXXXXXXXXXXXAQSGRGSR-PSRSELELINAWAFAGETVLHGTPSGLDNTVSCYGGAIKFIKGMGGAGNVTEPIPGFPPLSILFTNTRVPKDTRALVAGVRRLLNAHPGPRAKTFDAIGAIASEFSERAAASVKSRLSPQIIVVIVDAAGSMRP-------CKYRLKIASSRTRCQRRA-FPQKQHLCYNVSMPPRPAPLSVHGPWEGQDGINPSTTNVLTVSFVPTPHTPGGGGCALTIISGDKSLSKGPIVRDMESEGLECYQTSLGGDGVLWHGGSVPPEFQA 1165
             G++K    A V   FLALAIVP IF+GK    ARGLS+ AFSASLP+GAGLGSSAALCVATSAAL R A ++S+                   A E G                   + G GSR PS SELE INAWAFAGETVLHGTPSGLDNTVSCYGGAIKF+KGM GA N TEPIPGFPPL IL TNT VPK+T ALVAGVRRLL AH      TFDAIGAIA+EF +RAAASV +            AA    P       C   L   + R  C      P  + +C   S          HG             + LT +        GGGGCA+TI+SG+  L K  +V  M  EG +CY+TS+GGDGVL+HG +VPP F A
Sbjct:  184 EGRSKDGKKALVSLVFLALAIVPEIFLGKAGAGARGLSLRAFSASLPVGAGLGSSAALCVATSAALTRLADIISRA------------------AVEGG-----------------GERGGGGSRRPSGSELERINAWAFAGETVLHGTPSGLDNTVSCYGGAIKFVKGMDGAANTTEPIPGFPPLPILLTNTLVPKNTGALVAGVRRLLEAHRPATTATFDAIGAIAAEFLDRAAASVPAATPVAAAECGDGAAAPAAPAQPLTAECVGELAEMNHRLLCALGVGHPALERVCEVAS---------AHG-----------CRSKLTGA--------GGGGCAVTILSGE-DLCKASLVEAMLGEGFKCYETSIGGDGVLFHGDAVPPPFVA 511          
BLAST of mRNA_F-serratus_M_contig6375.17280.1 vs. uniprot
Match: A0A7S4B5A5_CHRCT (Mevalonate kinase n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B5A5_CHRCT)

HSP 1 Score: 152 bits (383), Expect = 2.460e-36
Identity = 126/397 (31.74%), Postives = 177/397 (44.58%), Query Frame = 2
Query:   44 DPPARV---FLALAIVPGIFVGKFCPAARGLSITAFSASLPIGAGLGSSAALCVATSAALMRTACL------------LSQGNDGRINVGNPRILHLSTEATERGETNTAXXXXXXXXXXXXXAQSGRGSRPSRSELELINAWAFAGETVLHGTPSGLDNTVSCYGGAIKFIKGMGGAGNVTEPIPGFPPLSILFTNTRVPKDTRALVAGVRRLLNAHPGPRAKTFDAIGAIASEFSER-AAASVKSRLSPQIIVVIVDAAGSMRPCKYRLKIASSRTRCQRRAFPQKQHLCYNVSMPPRPAPLSVHGPWEGQDGINPSTTNVLTVSFVPTPHTPGGGGCALTIISGDKSLSKGPIVR------DMESEGLECYQTSLGGDGVLWHGGSVPPEFQAA 1168
            D PA +   +LA  I+P +    +     GL++   SA LP+GAGLGSSAA  V+ SAAL+R   L            L+Q  D     G      L T   +                       GR +RPS +  +LINAWA++ E +LHGTPSGLDN+VSCYG A+K ++       + EP+  FP L +L TNT+VP+ TR  V+GVRRL  + P      F+AI ++A  F +  +  SV+     QI  ++                                H    V     PA L +     G+ G+    T              GGGGCA +I+ G++ L      R       + S   +CY+T++GG+GVLWH     PE +AA
Sbjct:  116 DLPALLPVLYLAAGIMPQLLHPSWT---GGLNLQVRSAKLPVGAGLGSSAAFSVSLSAALLRLQLLCVSMAAEAPESLLAQARDAMSPAGQRLASLLQTHDID-----------------------GRSARPSPTAKQLINAWAYSSECILHGTPSGLDNSVSCYGEAVKLMRAAPAEALLFEPVKRFPKLQVLLTNTKVPRKTREQVSGVRRLHESLPSVTIPVFEAISSVADAFLDLISGGSVEGAALAQIGRLV-----------------------------SMNHALLTVLGVSAPA-LQLVCDVAGKHGLPTKLTGA------------GGGGCAFSILGGEEELDSSMETRVQRCSRTLRSHRFDCYRTTVGGEGVLWH----EPEQEAA 440          
BLAST of mRNA_F-serratus_M_contig6375.17280.1 vs. uniprot
Match: A0A835Z5H2_9STRA (Mevalonate kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5H2_9STRA)

HSP 1 Score: 142 bits (358), Expect = 6.160e-33
Identity = 132/375 (35.20%), Postives = 182/375 (48.53%), Query Frame = 2
Query:   29 GQAKGDPPARV---FLALAIVPGIFVGKFCPAARGLSITAFSASLPIGAGLGSSAALCVATSAALMRTACLLSQGNDGRINVGNPRILHLSTEATERGETNTAXXXXXXXXXXXXXAQSGRGSRPSRSE-LELINAWAFAGETVLHGTPSGLDNTVSCYGGAIKFIKGMGGAGNVTEPIPGFPPLSILFTNTRVP-KDTRALVAGVRRLLNAHPGPRAKTFDAIGAIASEFSERAAASVKSRLSPQIIVVIVDAAGSMRPCKYRLKIASSRTRCQRRAFPQKQHLCYNVSMPPRPAPLSVHGPWEGQDGINPSTTNVLTVSFVPTPHTPGGGGCALTIISGDK-SLSKGPIVRDMESEGLECYQTSLGGDGVLWH 1135
            G  +GD PA +   FL+ AI+  +F  +  P  RGL + A S  LP+ AGLGSSAALCVAT+AAL                      L L             XXXXXXXXXXXXXA +G+  R  + E LE +NAWA+A ET++HG PSGLDNTVSCYGG +++++        TE +  FP LS+L T+TRV  + TR LVA V  LL   P   A+  +AI AIA +F      +    ++ + +       G++    + L  A                   + S+    A  +  G W    G                    GGGGCALT++  D  S ++  ++ ++++ G  CY + LGG GVL H
Sbjct:  114 GTREGDRPALLPLLFLSTAILSNLFADQTSPV-RGLRVRAVSCCLPVSAGLGSSAALCVATAAAL----------------------LELRRRLAXXXXXXXXXXXXXXXXXXXXXAPAGKRERVWQPEGLETLNAWAYAAETLIHGNPSGLDNTVSCYGGVLRYVR----EPRSTETVATFPQLSMLLTDTRVAGRSTRRLVAHVATLLGRCPDVTARVLEAIDAIAKQFL-----ACGDEMTAEEV-------GALMVMNHHLLGALG---------------VGHASLDAVCAAAARRGCWSKLTGA-------------------GGGGCALTLLRADLVSAARADLIEELQARGFRCYASDLGGQGVLLH 415          
BLAST of mRNA_F-serratus_M_contig6375.17280.1 vs. uniprot
Match: R1EVA3_EMIHU (Mevalonate kinase n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1EVA3_EMIHU)

HSP 1 Score: 141 bits (356), Expect = 1.940e-32
Identity = 137/395 (34.68%), Postives = 188/395 (47.59%), Query Frame = 2
Query:   29 GQAKGDPPARV---FLALAIVP--GIFVGKFCPAARGLSITAFSASLPIGAGLGSSAALCVATSAALMRTACLLSQ------GNDGRINVGNPRILHLSTEATERGETNTAXXXXXXXXXXXXXAQSGRG-------SRPSRSELELINAWAFAGETVLHGTPSGLDNTVSCYGGAIKFIKG--MGGAGNVTEPIPGFPPLSILFTNTRVPKDTRALVAGVRRLLNAHPGPRAKTFDAIGAIASEFSERAAASVKSRLSPQIIVVIVDAAGSMRPCKYRLKIASSRTRCQRRAFPQKQHLCYNVSMPPRPAPLSVHGPWEGQDGINPSTTNVLTVSFVPTPHTPGGGGCALTIIS------GDKSLSKGPIVRDMESEGLECYQTSLGGDGVLWH 1135
            G  + D  A V   FLA +++P  G  VG        L +   SA LP+GAGLGSSAA  VA +AAL+R   LL +       +D  +  G PR    +  + E G     XXXXXXXXXX   A +G         S PS +  ELIN WA+  E +LHGTPSGLDN VSC GG ++  +     GA    EPI    P+++L TNT VP+ TR LVA VR L +A P      F A+ ++A  F   A AS ++RLS ++  ++    G +                              VS+    A L        +D +  +  + L           GGGGCA++++       G+ S S     R +E++G  C+ TS+GGDGVL+H
Sbjct:  121 GAPEADKAALVPLLFLAASLLPQLGARVGGR------LRVGVRSAGLPVGAGLGSSAAFSVAVAAALLRLQLLLRERLGSTAASDLALLEGGPRAADGAATSAEAGXXXXXXXXXXXXXXXGRVAGTGEEGCREAETSTPSSAARELINGWAYCAECILHGTPSGLDNAVSCEGGGMRLQRAGRESGAALRFEPIASLRPMTVLVTNTNVPRSTRRLVAKVRALRDAQPALTEALFGAVASVAEAFLA-ATASSEARLSAELPELVRINHGLL------------------------------VSLGVSGAAL--------EDVVATAAEHGLATKLTGA----GGGGCAISVVGVGGAARGEASKSADAARRRLEAKGYNCHLTSVGGDGVLYH 466          
BLAST of mRNA_F-serratus_M_contig6375.17280.1 vs. uniprot
Match: A0A1V9ZWT1_9STRA (Mevalonate kinase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZWT1_9STRA)

HSP 1 Score: 119 bits (298), Expect = 1.270e-25
Identity = 107/359 (29.81%), Postives = 154/359 (42.90%), Query Frame = 2
Query:   59 VFLALAIVPGIFVGKFCPAARGLSITAFSASLPIGAGLGSSAALCVATSAALMRTACLLSQGNDGRINVGNPRILHLSTEATERGETNTAXXXXXXXXXXXXXAQSGRGSRPSRSELELINAWAFAGETVLHGTPSGLDNTVSCYGGAIKFIKGMGGAGNVTEPIPGFPPLSILFTNTRVPKDTRALVAGVRRLLNAHPGPRAKTFDAIGAIASEFSERAAASVKSRLSPQIIVVIVDAAGSMRPCKYRLKIASSRTRCQRRAFPQKQHLCYNVSMPPRPAPLSVHGPWEGQDGINPSTTNVLTVSFVPTPHTPGGGGCALTIISGDKSLSK-GPIVRDMESEGLECYQTSLGGDGVLW 1132
            +FL +AIVP I          G++I   S   P+GAGLGSSAA C A SAAL++                                                 A+S      S  +LE++N +AFA E +LHG PSG+DN+V+ +GGAI F +G+     + + +   PPL IL TNT VP++T+ LVAGVR+L +A+P      FD I  +A  F      +  +       VV+     + +     +++  S T  Q      K+H                              T  LT +        GGGGC +T+I  D S      +++D+E+ G  C +TSLGG GV W
Sbjct:  120 LFLLVAIVPEILNST-----SGVNIDVVSGEFPVGAGLGSSAAFCTAVSAALLK-------------------------------------------------ARS-----KSTVDLEVVNNYAFAAEVLLHGNPSGVDNSVATFGGAIVFKRGLE---TIMKKLV-IPPLRILLTNTHVPRETKVLVAGVRQLYDANPSAIQALFDTIEGLAGSFQHHVTGNTLTD------VVLSQIMATNQVALEAMQV--SHTSIQSICAASKEH----------------------------QMTTKLTGA--------GGGGCTITLIPADCSNETLKALIKDLEAFGFTCLETSLGGAGVQW 371          
BLAST of mRNA_F-serratus_M_contig6375.17280.1 vs. uniprot
Match: A0A1V9Z1Y6_9STRA (Mevalonate kinase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z1Y6_9STRA)

HSP 1 Score: 116 bits (290), Expect = 1.400e-24
Identity = 107/359 (29.81%), Postives = 152/359 (42.34%), Query Frame = 2
Query:   59 VFLALAIVPGIFVGKFCPAARGLSITAFSASLPIGAGLGSSAALCVATSAALMRTACLLSQGNDGRINVGNPRILHLSTEATERGETNTAXXXXXXXXXXXXXAQSGRGSRPSRSELELINAWAFAGETVLHGTPSGLDNTVSCYGGAIKFIKGMGGAGNVTEPIPGFPPLSILFTNTRVPKDTRALVAGVRRLLNAHPGPRAKTFDAIGAIASEFSERAAASVKSRLSPQIIVVIVDAAGSMRPCKYRLKIASSRTRCQRRAFPQKQHLCYNVSMPPRPAPLSVHGPWEGQDGINPSTTNVLTVSFVPTPHTPGGGGCALTIISGD-KSLSKGPIVRDMESEGLECYQTSLGGDGVLW 1132
            +FL +AIVPGI V        G+ I   S + P+GAGLGSSAA C + +AAL++                                                        +P   +L+++N+ AFA E +LH  PSG+DN+V+ YGGAI F +G       T      PPL IL TNT VP++T+ LV GVR L +A P      FDAI A+A+EF    AA             + DAA  + P     + A    +    +    Q +C         A  + HG            T  LT +        GGGGC +T+I     + +   ++ +++  G  C +T+LGG GV W
Sbjct:  117 LFLLVAIVPGILVSL-----HGVDIDVVSGAFPVGAGLGSSAAFCTSVAAALLKAI------------------------------------------------------QPHSVDLDVVNSHAFAAEVLLHDNPSGVDNSVATYGGAIVFKRGP----QTTMTKLTLPPLRILLTNTHVPRETKVLVGGVRVLYDADPVGVQARFDAIEALATEFQNHVAAHT-----------LTDAA--LAPMMATNQAALEALQVSHASI---QAIC---------AASAAHG-----------LTTKLTGA--------GGGGCTITLIPETCPAATLESLIANLQVLGYSCLETALGGAGVQW 368          
BLAST of mRNA_F-serratus_M_contig6375.17280.1 vs. uniprot
Match: A0A067CT61_SAPPC (Mevalonate kinase n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CT61_SAPPC)

HSP 1 Score: 112 bits (281), Expect = 2.380e-23
Identity = 110/359 (30.64%), Postives = 146/359 (40.67%), Query Frame = 2
Query:   59 VFLALAIVPGIFVGKFCPAARGLSITAFSASLPIGAGLGSSAALCVATSAALMRTACLLSQGNDGRINVGNPRILHLSTEATERGETNTAXXXXXXXXXXXXXAQSGRGSRPSRSELELINAWAFAGETVLHGTPSGLDNTVSCYGGAIKFIKGMGGAGNVTEPIPGFPPLSILFTNTRVPKDTRALVAGVRRLLNAHPGPRAKTFDAIGAIASEFSERAAASVKSRLSPQIIVVIVDAAGSMRPCKYRLKIASSRTRCQRRAFPQKQHLCYNVSMPPRPAPLSVHGPWEGQDGINPSTTNVLTVSFVPTPHTPGGGGCALTIISGD-KSLSKGPIVRDMESEGLECYQTSLGGDGVLW 1132
            +FL  AIVP +          G+ I   S + P+GAGLGSSAA C A +AAL++                       +T  T    T  A                          L+ +N +AFA E +LH  PSG+DN+V+ YGGAI F KG     +V       P L IL TNT VP++T+ LV GVR L +A P    + FD I A+AS F    AA     L+  ++  ++ AA        ++  AS R  C                                      S    LT          GGGGC +T+I  D  S S   +V D+E  G  C +T+LGG GV W
Sbjct:  122 LFLLAAIVPTLLSST----TSGVDIDVVSGAFPVGAGLGSSAAFCTAVAAALLK-----------------------ATATT----TTVA--------------------------LDDVNKYAFAAEVLLHDNPSGVDNSVATYGGAIVFKKGP----SVAMTKLALPSLRILLTNTHVPRETKVLVGGVRVLYDADPVAIQRQFDGIEALASSFQAHVAAKT---LTASVLAPMM-AANQEALETLQVSHASIRAICAA------------------------------------SAARGLTTKLTGA----GGGGCTITLIPNDCPSESLAALVADLEKLGYTCLETALGGTGVEW 375          
BLAST of mRNA_F-serratus_M_contig6375.17280.1 vs. uniprot
Match: A0A3B4BUV8_PYGNA (Mevalonate kinase n=2 Tax=Serrasalmidae TaxID=42495 RepID=A0A3B4BUV8_PYGNA)

HSP 1 Score: 112 bits (281), Expect = 3.180e-23
Identity = 100/338 (29.59%), Postives = 142/338 (42.01%), Query Frame = 2
Query:  125 LSITAFSASLPIGAGLGSSAALCVATSAALMRTACLLSQGNDGRINVGNPRILHLSTEATERGETNTAXXXXXXXXXXXXXAQSGRGSRPSRSELELINAWAFAGETVLHGTPSGLDNTVSCYGGAIKFIKGMGGAGNVTEPIPGFPPLSILFTNTRVPKDTRALVAGVRRLLNAHPGPRAKTFDAIGAIASEFSERAAASVKSRLSPQIIVVIVDAAGSMRPCKYRLKIASSRTRCQRRAFPQKQHLCYNVSMPPRPAPLSVHGPWEGQDGINPSTTNVLTVSFVPTPHTPGGGGCALTIISGDKSLSK-GPIVRDMESEGLECYQTSLGGDGVLWH 1135
            LS+  +S  LP GAGLGSSAA  V  SAAL+            R  +  P I           + NTA                    R S +ELELIN WAF GE ++HG PSG+DN VS +GG +++  GM        P+   P L IL TNT+VP+ T+ LV+GV+  +N +P       D++ A++    +  A       S +   ++ D                             QH             L+V G   G   ++      L           GGGGC +T++  +   S     V++++  G EC++TSLGG GVL H
Sbjct:  129 LSVCVWS-ELPTGAGLGSSAAFSVCLSAALL----------SARGTISTPLIQ----------QQNTA--------------------RWSDAELELINKWAFQGEKIIHGNPSGVDNAVSTWGGVLRYHAGM------ITPLSRVPTLRILLTNTKVPRSTKVLVSGVKDKINKYPSVMTPVLDSVDAVSQACEQTLADMATEGASTKHYNILED------------------------LIDINQHH------------LNVMG--VGHSSLDTLCRVTLAHGLHSKLTGAGGGGCGITLLRPETEPSVVQAAVQELKEAGFECWETSLGGPGVLLH 381          
BLAST of mRNA_F-serratus_M_contig6375.17280.1 vs. uniprot
Match: UPI001B7DB1E0 (LOW QUALITY PROTEIN: mevalonate kinase-like n=4 Tax=Acipenseroidei TaxID=186622 RepID=UPI001B7DB1E0)

HSP 1 Score: 111 bits (278), Expect = 7.810e-23
Identity = 101/341 (29.62%), Postives = 146/341 (42.82%), Query Frame = 2
Query:  152 LPIGAGLGSSAALCVATSAALMRT----ACLLSQGNDGRINVGNPRILHLSTEATERGETNTAXXXXXXXXXXXXXAQSGRGSRPSRSELELINAWAFAGETVLHGTPSGLDNTVSCYGGAIKFIKGMGGAGNVTEPIPGFPPLSILFTNTRVPKDTRALVAGVRRLLNAHPGPRAKTFDAIGAIASEFSERAAASVKSRLSPQIIVVIVDAAGSMRPCKYRLKIASSRTRCQRRAFPQKQHLCYNVSMPPRPAPLSVHGPWEGQDGI-NPSTTNVLTVSFVPTPHTP----GGGGCALTIISGDKSLSKGP-IVRDMESEGLECYQTSLGGDGVLWHGGS 1144
            LP GAGLGSSAA  V  SAAL+      ACL                      A E G+T                      +R S  ELELIN WAF GE ++HG PSG+DN +  +GGA+++  G       T+P+   P L IL TNTRVP+ T+ LV+GVR  +   P       ++I AI+ E                              C+        RT  +  + P+ QH      +      + ++       G+ +PS   +  VS     H+     GGGGC +T+++ D   S+    ++D++  G +C++TS+G  GVL H  S
Sbjct:  138 LPTGAGLGSSAAFSVCLSAALLACRGAIACL----------------------AVEAGQT----------------------ARWSDDELELINKWAFQGEKIIHGNPSGVDNAMGTWGGALRYHSGK------TKPLSSTPVLRILLTNTRVPRSTKVLVSGVRDKMTKFPAIMNPVLESIDAISCE------------------------------CE--------RTLMEMASGPEIQHYRVLEEL------IDINHHHLNVMGVGHPSLDRLCQVSLAHGLHSKLTGAGGGGCGITLLTPDTDSSEVERSMQDLKDCGYDCWETSIGAPGVLHHSSS 384          
BLAST of mRNA_F-serratus_M_contig6375.17280.1 vs. uniprot
Match: A0A7S2NSF0_9STRA (Mevalonate kinase (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NSF0_9STRA)

HSP 1 Score: 105 bits (262), Expect = 2.660e-22
Identity = 82/213 (38.50%), Postives = 108/213 (50.70%), Query Frame = 2
Query:   77 IVPGIFVGKFCPAARGLSITAFSASLPIGAGLGSSAALCVATSAALMRTACLLSQGNDGRINVGNPRILHLSTEATERGETNTAXXXXXXXXXXXXXAQSGRGSRPSRSELELINAWAFAGETVLHGTPSGLDNTVSCYGGAIKFIKGMGGAGNVT---EPIPGFPPLSILFTNTRVPKDTRALVAGVRRLLNAHPGPRAKTFDAIGAIASEF 706
            I+P +   K       +SI   S  LP+GAGLGSSAA CVA SAAL R           R   G   I+ ++       + NT                     RP ++ L++INAWAFA E V+HG PSGLDNTVSCYGGA+ + K     GN+    E +   PPL ++ TNT +P+ T+ALVAGV ++           F AIG I+ +F
Sbjct:    1 IIPALLNAK-----SSVSIYVRSEDLPLGAGLGSSAAFCVACSAALYRL----------REKTG---IMGVAAVDRNIKDNNT---------------------RPEQASLDIINAWAFASEGVIHGNPSGLDNTVSCYGGAVYYQKDAE-TGNLRAFHELV--VPPLDMILTNTFIPRSTKALVAGVHKVKEDFEFT-VDVFAAIGRISDQF 170          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig6375.17280.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FUV7_ECTSI1.180e-8349.74Mevalonate kinase n=1 Tax=Ectocarpus siliculosus T... [more]
A0A7S4B5A5_CHRCT2.460e-3631.74Mevalonate kinase n=1 Tax=Chrysotila carterae TaxI... [more]
A0A835Z5H2_9STRA6.160e-3335.20Mevalonate kinase n=1 Tax=Tribonema minus TaxID=30... [more]
R1EVA3_EMIHU1.940e-3234.68Mevalonate kinase n=2 Tax=Emiliania huxleyi TaxID=... [more]
A0A1V9ZWT1_9STRA1.270e-2529.81Mevalonate kinase n=1 Tax=Thraustotheca clavata Ta... [more]
A0A1V9Z1Y6_9STRA1.400e-2429.81Mevalonate kinase n=1 Tax=Achlya hypogyna TaxID=12... [more]
A0A067CT61_SAPPC2.380e-2330.64Mevalonate kinase n=2 Tax=Saprolegnia TaxID=4769 R... [more]
A0A3B4BUV8_PYGNA3.180e-2329.59Mevalonate kinase n=2 Tax=Serrasalmidae TaxID=4249... [more]
UPI001B7DB1E07.810e-2329.62LOW QUALITY PROTEIN: mevalonate kinase-like n=4 Ta... [more]
A0A7S2NSF0_9STRA2.660e-2238.50Mevalonate kinase (Fragment) n=1 Tax=Leptocylindru... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig6375contigF-serratus_M_contig6375:25955..28800 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score225.7
Seed ortholog evalue3.6e-56
Seed eggNOG ortholog2880.D7FUV7
Preferred nameMK
KEGG rclassRC00002,RC00017
KEGG koko:K00869
KEGG ReactionR02245
KEGG Pathwayko00900,ko01100,ko01110,ko01130,ko04146,map00900,map01100,map01110,map01130,map04146
KEGG ModuleM00095
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0004496,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006084,GO:0006139,GO:0006163,GO:0006629,GO:0006637,GO:0006644,GO:0006720,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008202,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009117,GO:0009150,GO:0009240,GO:0009259,GO:0009987,GO:0016125,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017076,GO:0019287,GO:0019637,GO:0019693,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0033865,GO:0033875,GO:0034032,GO:0034641,GO:0035383,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046490,GO:0046872,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901576,GO:1901615
EggNOG free text desc.mevalonate kinase activity
EggNOG OGsCOG1577@1,KOG1511@2759
EC2.7.1.36
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons3
Model size1834
Cds size1122
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig6375.17280.1prot_F-serratus_M_contig6375.17280.1Fucus serratus malepolypeptideF-serratus_M_contig6375 26672..28302 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931970.6786103-UTR-F-serratus_M_contig6375:25954..260621622931970.6786103-UTR-F-serratus_M_contig6375:25954..26062Fucus serratus maleUTRF-serratus_M_contig6375 25955..26062 +
1690964082.3644822-UTR-F-serratus_M_contig6375:25954..260621690964082.3644822-UTR-F-serratus_M_contig6375:25954..26062Fucus serratus maleUTRF-serratus_M_contig6375 25955..26062 +
1622931970.6958647-UTR-F-serratus_M_contig6375:26565..266711622931970.6958647-UTR-F-serratus_M_contig6375:26565..26671Fucus serratus maleUTRF-serratus_M_contig6375 26566..26671 +
1690964082.3860037-UTR-F-serratus_M_contig6375:26565..266711690964082.3860037-UTR-F-serratus_M_contig6375:26565..26671Fucus serratus maleUTRF-serratus_M_contig6375 26566..26671 +
1622931970.7787201-UTR-F-serratus_M_contig6375:28302..288001622931970.7787201-UTR-F-serratus_M_contig6375:28302..28800Fucus serratus maleUTRF-serratus_M_contig6375 28303..28800 +
1690964082.436784-UTR-F-serratus_M_contig6375:28302..288001690964082.436784-UTR-F-serratus_M_contig6375:28302..28800Fucus serratus maleUTRF-serratus_M_contig6375 28303..28800 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931970.7168994-CDS-F-serratus_M_contig6375:26671..270041622931970.7168994-CDS-F-serratus_M_contig6375:26671..27004Fucus serratus maleCDSF-serratus_M_contig6375 26672..27004 +
1690964082.4010336-CDS-F-serratus_M_contig6375:26671..270041690964082.4010336-CDS-F-serratus_M_contig6375:26671..27004Fucus serratus maleCDSF-serratus_M_contig6375 26672..27004 +
1622931970.7640605-CDS-F-serratus_M_contig6375:27513..283021622931970.7640605-CDS-F-serratus_M_contig6375:27513..28302Fucus serratus maleCDSF-serratus_M_contig6375 27514..28302 +
1690964082.423292-CDS-F-serratus_M_contig6375:27513..283021690964082.423292-CDS-F-serratus_M_contig6375:27513..28302Fucus serratus maleCDSF-serratus_M_contig6375 27514..28302 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig6375.17280.1

>prot_F-serratus_M_contig6375.17280.1 ID=prot_F-serratus_M_contig6375.17280.1|Name=mRNA_F-serratus_M_contig6375.17280.1|organism=Fucus serratus male|type=polypeptide|length=374bp
MRTACLLSQGNDGRINVGNPRILHLSTEATERGETNTAAAAAAASMAAGG
GAQSGRGSRPSRSELELINAWAFAGETVLHGTPSGLDNTVSCYGGAIKFI
KGMGGAGNVTEPIPGFPPLSILFTNTRVPKDTRALVAGVRRLLNAHPGPR
AKTFDAIGAIASEFSERAAASVKSRLSPQIIVVIVDAAGSMRPCKYRLKI
ASSRTRCQRRAFPQKQHLCYNVSMPPRPAPLSVHGPWEGQDGINPSTTNV
LTVSFVPTPHTPGGGGCALTIISGDKSLSKGPIVRDMESEGLECYQTSLG
GDGVLWHGGSVPPEFQAAEKGKKFVSEVYSHHIPLWRRKMISTQPPTRHP
STVRSRGDGLPSSSSGRPSRKAT*
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mRNA from alignment at F-serratus_M_contig6375:25955..28800+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig6375.17280.1 ID=mRNA_F-serratus_M_contig6375.17280.1|Name=mRNA_F-serratus_M_contig6375.17280.1|organism=Fucus serratus male|type=mRNA|length=2846bp|location=Sequence derived from alignment at F-serratus_M_contig6375:25955..28800+ (Fucus serratus male)
CGGCGTTTATTGGGGATGACTGGGCCGAGGACAAGCGAAAGGCGATCCTC CCGCTCGCGTGTTTCTCGCGTTGGCGATCGTTCCCGGCATCTTTGTCGGC AAGTTCTGGTGAGAGCGAGGCGGTCGAGAAGACCTAGTACGAAGGCCGTT GGCCCAGGCATTGACTAGACTCCCGGTCCTTTTTGTTGTTGCAAACTTGG TAGGCGATTTGGGGCGTGGATATCCTCGTAGGTTTTAGCTAATAATAGCA GGGGACAGCGCTAGCGCACGGGCTGCCGATGACTCTTGTACTCATTCTTT GAGTAAAAACGGCCAGATGGCGCCTTGCATGGTCCTTACCGCCCGAATCT GATCAGGAGCAAAGGCCTGCGTCAAACTTTGGTGTTGACCCGCTGTCCGC GAATTGAGAAAGGTTGGATGAGAAGGACACGGATGGCCGCATCCCAGAAT CAAACCTAGTCCCTATCACGTCGAAAGCTTTTTCTTGGAACACCTTTCAA GAGCTATTAGAGCTATTAGAGCTATTAGTAGTCATATATGTGCTGCGTCT GGTGTTGCCATCCATCCCCTTGACGAGCGCACGGATCTCTGCCGTCTCCC GCTTCTTCCAGTCCCGCCGCCCGAGGCCTGTCCATCACCGCCTTCAGCGC GTCCCTTCCGATCGGGGCCGGACTAGGGTCGTCGGCCGCGCTCTGCGTAG CCACGTCGGCTGCGCTCATGCGGACCGCCTGTCTCCTTTCCCAAGGCAAC GACGGGAGGATCAACGTCGGGAACCCTCGAATTCTACACCTATCTACGGA GGCGACGGAGAGAGGCGAAACAAATACCGCGGCGGCAGCAGCGGCGGCAT CGATGGCGGCTGGTGGCGGGGCGCAATCTGGGCGGGGCTCAAGGCCATCA CGGTCCGAGCTGGAGCTGATAAACGCGTGGGCATTCGCGGGGGAGACGGT GTTGCACGGCACGCCGTCGGGGCTAGACAATACCGTCAGCTGCTACGGCG GTGCGATCAAGTTCATCAAGGGCATGGGTGGTGCGGGGAACGTGACAGAG GTGAGGGGGTGGTGGTCCGCGGGAAATACTTGCTGCTTCGGGGACTGGAC GGGGGATGTAGCATCTGGCGCTACACCTAGGCTGAAAGTTCGTTACCGTC TCTCGAGATCCGGAACTGGTGTACGCGTTTCAGGAGAGTTTTGTACTGTA GCGTAAGCTAGTGCGACGTGCGTTTCTACACGAGCCGTGGTGCAGGTGCT GGTTGGATGTCGGTGGCACACCGTTTCGAGTCGAACGAGAGAGAAGAAAG ACTGGTCGAGCACCTCGTTGTGATGCGGACACTCGGTTGTTGACAGGGCT CGAGCGTTCCGTGTGATCTCCCCGAGTAAGGAGGTTGACGCGCAGATGAC TGCCCACGATGCAAATCACGCGAAAGGTAGCAACTCACCATGGTGTACAG CACTGGTGTACTATCGTGAGTCATTTTCGCCCATCCTCTGCCGTGTTCCC GCTCTCCATTCTGTTTCTGTACGCCTCGTAGCCCGAACCGCCCCCCGCCC CCCGCCCAGCCGATCCCCGGGTTTCCGCCTCTGTCGATTCTCTTTACGAA CACCCGGGTGCCCAAGGACACCCGAGCTCTAGTTGCGGGAGTGCGGCGTC TTCTTAATGCTCACCCCGGCCCAAGAGCCAAAACCTTCGACGCCATCGGG GCCATCGCCTCGGAATTCTCAGAACGCGCTGCCGCGTCGGTCAAGAGTCG GCTCTCCCCCCAAATAATCGTCGTGATCGTTGACGCAGCTGGTAGTATGC GACCGTGCAAGTATCGGCTCAAAATTGCTTCCTCGAGAACTCGCTGTCAA AGGCGCGCTTTTCCTCAAAAACAACATTTGTGTTACAACGTGTCCATGCC CCCCCGCCCCGCGCCGCTTTCTGTCCACGGACCGTGGGAGGGACAAGATG GAATCAATCCATCGACTACCAACGTTCTAACCGTGTCTTTTGTTCCCACT CCACATACTCCAGGCGGGGGAGGCTGCGCCTTGACAATTATTTCCGGCGA CAAGAGCCTCTCTAAAGGTCCTATCGTCAGAGACATGGAGTCGGAAGGGC TCGAGTGTTATCAGACTTCTTTGGGCGGTGACGGGGTGCTGTGGCACGGT GGGAGCGTTCCGCCAGAATTCCAGGCTGCGGAAAAGGGGAAGAAATTTGT GTCTGAGGTTTATTCGCATCATATCCCTTTGTGGCGGAGAAAAATGATCT CGACCCAGCCCCCAACGCGGCATCCCTCAACTGTCCGCTCGCGCGGCGAT GGTCTTCCTTCTTCTTCTTCTGGACGGCCTTCTCGAAAGGCGACGTAGCG GAAGCAATAGTTAGTGGCTTAGACTATTTAGTTCCGCATTCTTTGGTTGC GTGGCATGAATGAGGTTGTCTACAGCGAAGGGTTTCCGGTCGTGACGCGC CAAAGAACCAGCGGTCAGTTTTCCACAGAGACCATTCAGGGCAGCTGCTC TGAATGTTTTTTGTTTTGTTTTTTTGTTCGTTTCATCTCACTTATAACCG ATGGCTCTCTATGTTGCCATCCTTCCTATGGTCTCTTAAGGACGTTCCCA TCCCTCTTCGGTGTACCGGTACGCCTTATGATAGGATTTTTTTATCGCTA TCGATGTACGCCTCCGAGCGCTCACTGATAGCCGTATTGTTTTTGGTTCA CGTGCGCCCGTAGCTATTGATAAGCCACGAAGCAGTGATCAGGGTCCGCA CACTGGGCGGGAATGTATCCTCCATTACACGCTTCGTTAACACATGCTTT TGTTTGTTAACTCTCGCTGCCGATCTGCCCGAGCTCCACGAGCCAG
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Coding sequence (CDS) from alignment at F-serratus_M_contig6375:25955..28800+

>mRNA_F-serratus_M_contig6375.17280.1 ID=mRNA_F-serratus_M_contig6375.17280.1|Name=mRNA_F-serratus_M_contig6375.17280.1|organism=Fucus serratus male|type=CDS|length=2244bp|location=Sequence derived from alignment at F-serratus_M_contig6375:25955..28800+ (Fucus serratus male)
ATGCGGACCGCCTGTCTCCTTTCCCAAGGCAACGACGGGAGGATCAACGT
CGGGAACCCTCGAATTCTACACCTATCTACGGAGGCGACGGAGAGAGGCG
AAACAAATACCGCGGCGGCAGCAGCGGCGGCATCGATGGCGGCTGGTGGC
GGGGCGCAATCTGGGCGGGGCTCAAGGCCATCACGGTCCGAGCTGGAGCT
GATAAACGCGTGGGCATTCGCGGGGGAGACGGTGTTGCACGGCACGCCGT
CGGGGCTAGACAATACCGTCAGCTGCTACGGCGGTGCGATCAAGTTCATC
AAGGGCATGGGTGGTGCGGGGAACGTGACAGAGATGCGGACCGCCTGTCT
CCTTTCCCAAGGCAACGACGGGAGGATCAACGTCGGGAACCCTCGAATTC
TACACCTATCTACGGAGGCGACGGAGAGAGGCGAAACAAATACCGCGGCG
GCAGCAGCGGCGGCATCGATGGCGGCTGGTGGCGGGGCGCAATCTGGGCG
GGGCTCAAGGCCATCACGGTCCGAGCTGGAGCTGATAAACGCGTGGGCAT
TCGCGGGGGAGACGGTGTTGCACGGCACGCCGTCGGGGCTAGACAATACC
GTCAGCTGCTACGGCGGTGCGATCAAGTTCATCAAGGGCATGGGTGGTGC
GGGGAACGTGACAGAGCCGATCCCCGGGTTTCCGCCTCTGTCGATTCTCT
TTACGAACACCCGGGTGCCCAAGGACACCCGAGCTCTAGTTGCGGGAGTG
CGGCGTCTTCTTAATGCTCACCCCGGCCCAAGAGCCAAAACCTTCGACGC
CATCGGGGCCATCGCCTCGGAATTCTCAGAACGCGCTGCCGCGTCGGTCA
AGAGTCGGCTCTCCCCCCAAATAATCGTCGTGATCGTTGACGCAGCTGGT
AGTATGCGACCGTGCAAGTATCGGCTCAAAATTGCTTCCTCGAGAACTCG
CTGTCAAAGGCGCGCTTTTCCTCAAAAACAACATTTGTGTTACAACGTGT
CCATGCCCCCCCGCCCCGCGCCGCTTTCTGTCCACGGACCGTGGGAGGGA
CAAGATGGAATCAATCCATCGACTACCAACGTTCTAACCGTGTCTTTTGT
TCCCACTCCACATACTCCAGGCGGGGGAGGCTGCGCCTTGACAATTATTT
CCGGCGACAAGAGCCTCTCTAAAGGTCCTATCGTCAGAGACATGGAGTCG
GAAGGGCTCGAGTGTTATCAGACTTCTTTGGGCGGTGACGGGGTGCTGTG
GCACGGTGGGAGCGTTCCGCCAGAATTCCAGGCTGCGGAAAAGGGGAAGA
AATTTGTGTCTGAGGTTTATTCGCATCATATCCCTTTGTGGCGGAGAAAA
ATGATCTCGACCCAGCCCCCAACGCGGCATCCCTCAACTGTCCGCTCGCG
CGGCGATGGTCTTCCTTCTTCTTCTTCTGGACGGCCTTCTCGAAAGGCGA
CGTAGCCGATCCCCGGGTTTCCGCCTCTGTCGATTCTCTTTACGAACACC
CGGGTGCCCAAGGACACCCGAGCTCTAGTTGCGGGAGTGCGGCGTCTTCT
TAATGCTCACCCCGGCCCAAGAGCCAAAACCTTCGACGCCATCGGGGCCA
TCGCCTCGGAATTCTCAGAACGCGCTGCCGCGTCGGTCAAGAGTCGGCTC
TCCCCCCAAATAATCGTCGTGATCGTTGACGCAGCTGGTAGTATGCGACC
GTGCAAGTATCGGCTCAAAATTGCTTCCTCGAGAACTCGCTGTCAAAGGC
GCGCTTTTCCTCAAAAACAACATTTGTGTTACAACGTGTCCATGCCCCCC
CGCCCCGCGCCGCTTTCTGTCCACGGACCGTGGGAGGGACAAGATGGAAT
CAATCCATCGACTACCAACGTTCTAACCGTGTCTTTTGTTCCCACTCCAC
ATACTCCAGGCGGGGGAGGCTGCGCCTTGACAATTATTTCCGGCGACAAG
AGCCTCTCTAAAGGTCCTATCGTCAGAGACATGGAGTCGGAAGGGCTCGA
GTGTTATCAGACTTCTTTGGGCGGTGACGGGGTGCTGTGGCACGGTGGGA
GCGTTCCGCCAGAATTCCAGGCTGCGGAAAAGGGGAAGAAATTTGTGTCT
GAGGTTTATTCGCATCATATCCCTTTGTGGCGGAGAAAAATGATCTCGAC
CCAGCCCCCAACGCGGCATCCCTCAACTGTCCGCTCGCGCGGCGATGGTC
TTCCTTCTTCTTCTTCTGGACGGCCTTCTCGAAAGGCGACGTAG
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