prot_F-serratus_M_contig1221.1719.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1221.1719.1
Unique Nameprot_F-serratus_M_contig1221.1719.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length143
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig1221.1719.1 vs. uniprot
Match: D7FY59_ECTSI (Ku_PK_bind domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY59_ECTSI)

HSP 1 Score: 142 bits (358), Expect = 1.600e-40
Identity = 75/121 (61.98%), Postives = 92/121 (76.03%), Query Frame = 0 
Query:    1 MMAAARSGDEGGAELADRAVNQMQGVILSLINKGTTASLKAKALSCIKALRQACVSHFMGKNYNDFLQEVKGQHQDDSQRSEVWEMAAKDSGAWPITSEDDAGLSMTPHAAAEFMTAEAEK 121
            MMA+A +GDEGG ELAD AV QMQ VI +L+ KGTT+SL+AKA+SC+KALR A V+H MG+ YNDFL  +K ++Q     S++WEM   + G WPITSEDDA LSMTP +AAEFM AE  K
Sbjct:   31 MMASAIAGDEGGPELADLAVQQMQAVIHTLVRKGTTSSLRAKAVSCVKALRAASVAHIMGQRYNDFLAVMKAKYQR-GDNSDIWEMVMGEKGTWPITSEDDASLSMTPESAAEFMKAEEVK 150
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1221.1719.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FY59_ECTSI1.600e-4061.98Ku_PK_bind domain-containing protein n=1 Tax=Ectoc... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014893Ku, C-terminalPFAMPF08785Ku_PK_bindcoord: 13..115
e-value: 3.1E-24
score: 85.4
IPR036494Ku, C-terminal domain superfamilyGENE3D1.25.40.240coord: 2..119
e-value: 1.5E-21
score: 78.4
IPR036494Ku, C-terminal domain superfamilySUPERFAMILY101420C-terminal domain of Ku80coord: 14..117

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1221contigF-serratus_M_contig1221:189248..191005 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1221.1719.1mRNA_F-serratus_M_contig1221.1719.1Fucus serratus malemRNAF-serratus_M_contig1221 160927..191511 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1221.1719.1 ID=prot_F-serratus_M_contig1221.1719.1|Name=mRNA_F-serratus_M_contig1221.1719.1|organism=Fucus serratus male|type=polypeptide|length=143bp
MMAAARSGDEGGAELADRAVNQMQGVILSLINKGTTASLKAKALSCIKAL
RQACVSHFMGKNYNDFLQEVKGQHQDDSQRSEVWEMAAKDSGAWPITSED
DAGLSMTPHAAAEFMTAEAEKGQEEEGAHDAQDDDDDLDDMA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014893Ku_PK_bind
IPR036494Ku_C_sf