mRNA_F-serratus_M_contig122.1708.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig122.1708.1
Unique NamemRNA_F-serratus_M_contig122.1708.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig122.1708.1 vs. uniprot
Match: A0A6H5JUZ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUZ4_9PHAE)

HSP 1 Score: 263 bits (673), Expect = 1.470e-76
Identity = 136/289 (47.06%), Postives = 192/289 (66.44%), Query Frame = 1
Query:    1 NPAVAREVDSIIEKYLKAGIKRCSQQPYAAPIVVLLKKKGKIRFTCEYRRRNEATVIPQTQIPRIDKILDTLGSAKFLSSFDMVSGFHPVVIGETSVPLTAFCTASGSYEFLVMPTGTSDSPGHFQRLMQQVTADLAHFVTIYIDDVLVRSNDEASMVDNIERLLKALTKHNLKISPSKSEVGAEEINVLCHTISPPGVKPDAKKVDPLRKLSMSNRVTELRSLLGGLSYYRQFLPNLSKKLQSTTKQLKKDVPFRFTAEMVTAVRETLSVLIKPPVLVHPDFEAARDG 867
            NP VA++VD+I+++YL AG+ + S  PY++P+VV+ KK G +R T  YR+ N+   + Q  IPR+D  LD L   +  S FDM S FH + +   ++PLTAF T+SG +E+L MP G+S +PG F +++ +V  +L H V  Y+DD++V  ++ AS VD +  L + L  HNLK++P K+ VGA E + L HTISP GV+P+  KV  L K+ M   V +LRSLLGGLSYYR+FLPN++ +++  T  LKK   F FT  M  AVR  LS L  PPVLV+PD++A  DG
Sbjct:  281 NPPVAKQVDAILDQYLAAGLIQHSTSPYSSPLVVIPKKSGGVRITVNYRKLNKLCALSQLPIPRVDDTLDKLLKGRIYSLFDMKSSFHQITVHRDTIPLTAFVTSSGLFEWLKMPQGSSAAPGWFCKVVNEVIKNL-HGVASYLDDLIVFDDNPASHVDTMRALFERLRTHNLKLTPPKATVGATEADFLGHTISPDGVRPNGAKVAALTKMPMPRDVKQLRSLLGGLSYYRKFLPNMATRIRPLTTLLKKQATFVFTLAMEQAVRILLSELANPPVLVYPDWDAVSDG 568          
BLAST of mRNA_F-serratus_M_contig122.1708.1 vs. uniprot
Match: A0A6H5L052_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L052_9PHAE)

HSP 1 Score: 251 bits (640), Expect = 1.270e-75
Identity = 131/282 (46.45%), Postives = 183/282 (64.89%), Query Frame = 1
Query:    1 NPAVAREVDSIIEKYLKAGIKRCSQQPYAAPIVVLLKKKGKIRFTCEYRRRNEATVIPQTQIPRIDKILDTLGSAKFLSSFDMVSGFHPVVIGETSVPLTAFCTASGSYEFLVMPTGTSDSPGHFQRLMQQVTADLAHFVTIYIDDVLVRSNDEASMVDNIERLLKALTKHNLKISPSKSEVGAEEINVLCHTISPPGVKPDAKKVDPLRKLSMSNRVTELRSLLGGLSYYRQFLPNLSKKLQSTTKQLKKDVPFRFTAEMVTAVRETLSVLIKPPVLVHPD 846
            NP VA++VD+I+++YL AG+ + S  PY++ +VV+LKK G +R T  YR+ N+   + Q  IPRID  LD L      S FDM S FH + +   ++PLTAF T+ G +E+L MP G+S +PG F +++ +V  +L H V  Y+DD++V  N+ A  VD +  L + L  HNLK++P K+ +G  E N L HTISP GV+P+  KV  L K+ +   V +LRSLLGGLSYYR+FLPN++ +++  T  LKK   F FT  M  AVR  LS L  PPVLV+PD
Sbjct:  319 NPPVAKQVDAILDQYLAAGLIQHSTSPYSSALVVILKKSGGVRITVNYRKLNKLCTLSQLPIPRIDDTLDKLLKGHTYSLFDMKSSFHQITVHRETIPLTAFVTSCGLFEWLKMPQGSSAAPGWFCKVVNEVIKNL-HGVASYLDDLIVFDNNPAFHVDTMRALFERLRTHNLKLTPPKATIGTTEANFLGHTISPDGVRPNGAKVAALTKMPVPKDVKQLRSLLGGLSYYRKFLPNMATRIRPLTTLLKKQATFVFTPAMAQAVRVLLSELANPPVLVYPD 599          
BLAST of mRNA_F-serratus_M_contig122.1708.1 vs. uniprot
Match: A0A6H5JFL9_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFL9_9PHAE)

HSP 1 Score: 253 bits (647), Expect = 1.070e-74
Identity = 131/289 (45.33%), Postives = 189/289 (65.40%), Query Frame = 1
Query:    1 NPAVAREVDSIIEKYLKAGIKRCSQQPYAAPIVVLLKKKGKIRFTCEYRRRNEATVIPQTQIPRIDKILDTLGSAKFLSSFDMVSGFHPVVIGETSVPLTAFCTASGSYEFLVMPTGTSDSPGHFQRLMQQVTADLAHFVTIYIDDVLVRSNDEASMVDNIERLLKALTKHNLKISPSKSEVGAEEINVLCHTISPPGVKPDAKKVDPLRKLSMSNRVTELRSLLGGLSYYRQFLPNLSKKLQSTTKQLKKDVPFRFTAEMVTAVRETLSVLIKPPVLVHPDFEAARDG 867
            NP VA++VD+I+++YL AG+ + S  PY++P+VV+ KK G +R T  YR+ N+   + Q  IPR+D  LD L   +  S FDM S FH + +   ++PLTAF T+S  +E+L MP G+S +PG F +++ +V  +L H V  Y+DD++V  +  A+ V  +  L + L  HNLK++P K+ +GA E + L HTISP GV+P+  KV  L K+ M   V +LRSLLGGLSYYR+FLP ++K+++  T  LKK   F FT  M  AVR  L+ L  PPVLV+PD++A  DG
Sbjct:  176 NPPVAKQVDAILDQYLAAGLIQHSTSPYSSPLVVIPKKSGGVRITVNYRKLNKLCALSQLPIPRVDDTLDKLLKGRIYSLFDMKSSFHQITVHRDTIPLTAFVTSSELFEWLKMPQGSSAAPGWFCKVVNEVIKNL-HGVASYLDDLIVFDDTPATHVGTMRALFERLRTHNLKLTPPKATIGATEADFLGHTISPDGVRPNGAKVSALTKMPMPRDVKQLRSLLGGLSYYRKFLPFMAKRIRYLTTLLKKQEKFIFTPSMEQAVRVLLAELANPPVLVYPDWDAVSDG 463          
BLAST of mRNA_F-serratus_M_contig122.1708.1 vs. uniprot
Match: A0A6H5JJR1_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJR1_9PHAE)

HSP 1 Score: 242 bits (618), Expect = 6.530e-72
Identity = 129/289 (44.64%), Postives = 186/289 (64.36%), Query Frame = 1
Query:    1 NPAVAREVDSIIEKYLKAGIKRCSQQPYAAPIVVLLKKKGKIRFTCEYRRRNEATVIPQTQIPRIDKILDTLGSAKFLSSFDMVSGFHPVVIGETSVPLTAFCTASGSYEFLVMPTGTSDSPGHFQRLMQQVTADLAHFVTIYIDDVLVRSNDEASMVDNIERLLKALTKHNLKISPSKSEVGAEEINVLCHTISPPGVKPDAKKVDPLRKLSMSNRVTELRSLLGGLSYYRQFLPNLSKKLQSTTKQLKKDVPFRFTAEMVTAVRETLSVLIKPPVLVHPDFEAARDG 867
            NP VA+ VD+I+++YL AG+ + S  PY++P+VV+ KK G +R T  YR+ N+   + Q  IPR+D  LD L   +  S FD+ S FH + + +T +PLTAF T+SG +E+L MP G+S +PG F +++ + +         Y+DD++V  +D A+ V  +  L   L  HNLK++P K+ +GA E + L HTISP GV+P+  KV  L K+ M   V +LRSLLGGLSYYR+FLPN++K+++  T  LKK   F FT  M  AVR  L+ L  PPVL +PD++A  DG
Sbjct:   38 NPPVAKIVDAILDQYLAAGLIQHSTSPYSSPLVVIPKKSGGVRITVNYRKLNKLCALSQLPIPRVDDTLDKLLKGRIYSLFDIKSSFHQITVHDT-IPLTAFVTSSGLFEWLKMPQGSSAAPGWFCKVVNEAS---------YLDDLIV-FDDAATHVGTMRALFDCLRTHNLKLTPPKATIGATEADFLGHTISPDGVRPNGAKVSALTKMPMPRDVEQLRSLLGGLSYYRKFLPNMAKRIRPLTTLLKKQEKFIFTPSMEQAVRVLLAELANPPVLDYPDWDAVSDG 315          
BLAST of mRNA_F-serratus_M_contig122.1708.1 vs. uniprot
Match: A0A6H5JUV3_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUV3_9PHAE)

HSP 1 Score: 238 bits (607), Expect = 1.420e-71
Identity = 124/286 (43.36%), Postives = 182/286 (63.64%), Query Frame = 1
Query:   10 VAREVDSIIEKYLKAGIKRCSQQPYAAPIVVLLKKKGKIRFTCEYRRRNEATVIPQTQIPRIDKILDTLGSAKFLSSFDMVSGFHPVVIGETSVPLTAFCTASGSYEFLVMPTGTSDSPGHFQRLMQQVTADLAHFVTIYIDDVLVRSNDEASMVDNIERLLKALTKHNLKISPSKSEVGAEEINVLCHTISPPGVKPDAKKVDPLRKLSMSNRVTELRSLLGGLSYYRQFLPNLSKKLQSTTKQLKKDVPFRFTAEMVTAVRETLSVLIKPPVLVHPDFEAARDG 867
            VA++V++I ++YL AG+ + S  PY++P+V++ KK G +  T  YR+ N+   + Q  IPR+D  LD L   +  S FDM S FH + +   ++PLTAF T+S  +E+L MP G+S +PG F +++ +V  +L H V  Y+DD++V  +   + V  +  L + L  HNLK++P ++ +GA E + L HTISP GV P   KV  L K+ M   V +LRSLLGGLSYYR+FLPN++K+++  T  LKK   F FT  M  AVR   + L  PPVLV+PD++A  DG
Sbjct:   66 VAKQVEAIHDQYLAAGLIQHSTSPYSSPLVIIPKKSGGVCITVNYRKLNKLCALGQLPIPRVDDTLDKLLKGRIYSLFDMKSSFHQITVHRDTIPLTAFVTSSELFEWLKMPQGSSAAPGRFCKVVNEVIKNL-HDVASYLDDLIVFDDTLPTHVGTMRTLFERLRTHNLKLTPPQATIGATEADFLRHTISPDGVGPTGAKVSALTKMPMPRDVKQLRSLLGGLSYYRKFLPNMAKRIRPLTTLLKKQEKFIFTPSMEQAVRVLFAELANPPVLVYPDWDAVSDG 350          
BLAST of mRNA_F-serratus_M_contig122.1708.1 vs. uniprot
Match: A0A6H5KWU8_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWU8_9PHAE)

HSP 1 Score: 227 bits (578), Expect = 1.310e-69
Identity = 118/282 (41.84%), Postives = 178/282 (63.12%), Query Frame = 1
Query:    1 NPAVAREVDSIIEKYLKAGIKRCSQQPYAAPIVVLLKKKGKIRFTCEYRRRNEATVIPQTQIPRIDKILDTLGSAKFLSSFDMVSGFHPVVIGETSVPLTAFCTASGSYEFLVMPTGTSDSPGHFQRLMQQVTADLAHFVTIYIDDVLVRSNDEASMVDNIERLLKALTKHNLKISPSKSEVGAEEINVLCHTISPPGVKPDAKKVDPLRKLSMSNRVTELRSLLGGLSYYRQFLPNLSKKLQSTTKQLKKDVPFRFTAEMVTAVRETLSVLIKPPVLVHPD 846
            +P VAR+VD+I+++YL AG+ + S  PY++P+V + KK G +R T  YR+ N+   + Q  IPR+D  LD L   +  S F+M   FH + +   ++PLTAF T+SG +E+L +P G+S +PG F +L  + +     ++   +DD++V  +  A+ V  +  L + L  HNL+++P K+ +G  E + L HTISP GV+P+  KV  L K+SM   V +LRSLLGGLSYYR+FLPN++ +++  T  LKK   F FT  M  AVR   + L  PPVLV+P+
Sbjct:   35 DPPVARQVDAILDQYLAAGLIQHSTSPYSSPLVFIPKKSGGVRITVNYRKLNKLCALSQLPIPRVDDTLDKLLKGRIYSLFEMKFSFHQITVHRDTIPLTAFVTSSGLFEWLKLPQGSSAAPGWFAKLSTKSSIIRRCYI---LDDLIVFDDTPATHVGTMRALFERLRTHNLELTPPKATIGVTEADFLGHTISPDGVRPNGAKVSALTKMSMPKDVMQLRSLLGGLSYYRKFLPNMANRIRPLTTLLKKQEKFIFTPSMEQAVRVLSAELANPPVLVYPN 313          
BLAST of mRNA_F-serratus_M_contig122.1708.1 vs. uniprot
Match: A0A6H5KCB1_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCB1_9PHAE)

HSP 1 Score: 226 bits (576), Expect = 2.950e-69
Identity = 118/289 (40.83%), Postives = 174/289 (60.21%), Query Frame = 1
Query:    1 NPAVAREVDSIIEKYLKAGIKRCSQQPYAAPIVVLLKKKGKIRFTCEYRRRNEATVIPQTQIPRIDKILDTLGSAKFLSSFDMVSGFHPVVIGETSVPLTAFCTASGSYEFLVMPTGTSDSPGHFQRLMQQVTADLAHFVTIYIDDVLVRSNDEASMVDNIERLLKALTKHNLKISPSKSEVGAEEINVLCHTISPPGVKPDAKKVDPLRKLSMSNRVTELRSLLGGLSYYRQFLPNLSKKLQSTTKQLKKDVPFRFTAEMVTAVRETLSVLIKPPVLVHPDFEAARDG 867
            NP VA++VD+I++KYL AG+ + S  PY +PIVV+ K  G +R T  Y++ N  +   Q  +PR+D+I++ L      S FD    FH V +   ++PLTAF T +  +E+L MP G S S G + +++  V  +L   V  Y+DDV++     A  +  +   L+ L KH LK+S  K+ +G     +L HTI+P G++P+A KV  L  + M   +  LRSLLGGLSYYR F+ NLS++++  T  LKK   F FT++M   VRE L  L +PP+LV PD++A  DG
Sbjct:    2 NPLVAKQVDAILDKYLAAGLIQHSTSPYCSPIVVIPKISGGLRITVNYQKLNRISSFSQLPVPRVDEIMNKLHQGSIFSLFDFTGSFHQVPVHPDTIPLTAFATPTRLFEWLKMPMGASQSSGWWMKVINDVFENLEG-VDAYLDDVVLYDKTPADHIRTMRAFLQRLRKHKLKLSQPKATIGTTHSALLGHTITPDGIRPNANKVAALAAMPMPTALKRLRSLLGGLSYYRSFVKNLSRRVRPVTTILKKKSSFTFTSDMEAIVREILKELSEPPILVFPDWKAIEDG 289          
BLAST of mRNA_F-serratus_M_contig122.1708.1 vs. uniprot
Match: A0A6H5JBV9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBV9_9PHAE)

HSP 1 Score: 236 bits (602), Expect = 3.330e-69
Identity = 126/287 (43.90%), Postives = 184/287 (64.11%), Query Frame = 1
Query:   13 AREVDSIIEKYLKAGIKRCSQQPYAAPIVVLLKKKGKIRFTCEYRRRNEATVIPQTQIPRIDKILDTLGSAKFLSSFDMVSGFHPVVIGETSVPLTAFCTASGSYEFLVMPTGTSDSPGHFQRLMQQVTADLAHFVTIYIDDVLVRSNDEASMVDNIERLLKALTKHNLKISPSKSEVGAEEINVLCHTISPPGVKPDAKKVDPLRKLSMSNRVTELRSLLGGLSYYRQFLPNLSKKLQSTTKQLKKDVPFRFTAEMVTAVRETLSVLIKPPVLVHPD---FEAARD 864
            A++VD+I+++YL AG+ + S  PY++P+VV+ KK G +R T  YR+ N+   + Q  IPR+D  LD L   +  S FDM S FH + +   ++PLTAF T+ G + +L MP G+S + G F +++++V  +L   V  Y+DD++V     A+ V  +  L + L  HNLK++P K+ +GA E + L HTISP GV+P+  KV  L K+ M   V +LRS+LGGLSYYR+FLPN++K+++  T  LKK   F FT  M  AVR  L+ L  PPVLV+PD   F+ ARD
Sbjct:   43 AKQVDAILDQYLVAGLIQHSTSPYSSPLVVIPKKSGGVRTTVNYRKLNKLCALSQLPIPRVDDTLDKLLKGRIYSIFDMKSSFHQITVHRDTIPLTAFVTSFGLFAWLKMPQGSSAASGWFCKVVKEVIKNLRG-VASYLDDLIVFDVTPATHVGTMRALFERLRAHNLKLTPPKATIGATEADFLGHTISPDGVRPNGAKVSALTKMPMPKDVKQLRSVLGGLSYYRKFLPNMAKRIRPLTTLLKKQEKFIFTPSMEQAVRVLLAELANPPVLVYPDWDAFQTARD 328          
BLAST of mRNA_F-serratus_M_contig122.1708.1 vs. uniprot
Match: A0A6H5K248_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K248_9PHAE)

HSP 1 Score: 233 bits (595), Expect = 2.980e-68
Identity = 126/298 (42.28%), Postives = 184/298 (61.74%), Query Frame = 1
Query:   16 REVDSIIEKYLKAGIKRCSQQPYAAPIVVLLKKKGKIRFTCEYRRRNEATVIPQTQIPRIDKILDTLGSAKFLSSFDMVSGFHPVVIGETSVPLTAFCTASGSYEFLVMPTGTSDSPGHFQRLMQQVTADLAHFVTIYIDDVLVRSNDEASMVD--------------NIERLLKALTKHNLKISPSKSEVGAEEINVLCHTISPPGVKPDAKKVDPLRKLSMSNRVTELRSLLGGLSYYRQFLPNLSKKLQSTTKQLKKDVPFRFTAEMVTAVRETLSVLIKPPVLVHPDFEAARDG 867
            ++VD+I+++YL AG+ + S  PY+ P+VV+ KK G +R T   R+ N+   + Q  IPR+D  L  L   K  S FDM S FH + +   ++PLTAF T+SG +E+L MP G++ +PG F +++ +V  +L   V  Y+DD++V     A+ V                I  L + L  HNLK++PSK+ +GA E   L HTISP GV+P+  KV  L K+ M N   +LR+LLGGL+YYR+FLP ++K+++  T  LKKDV F F   M +AVR+ L+ L  PPVLV+PD++A  DG
Sbjct:  187 QKVDAILDQYLAAGLIQHSTSPYSIPLVVIPKKSGGLRITVNNRKLNKLCALSQLPIPRVDDTLAKLLKGKIYSLFDMKSSFHQITVHRDTIPLTAFVTSSGLFEWLKMPQGSAAAPGWFCKVVNEVIRNLRG-VASYLDDLIVFDETPAAHVAXSGQCCCPRMVLQATIRSLFERLRTHNLKLTPSKATIGATEAEFLGHTISPDGVRPNGDKVIALTKMPMPNDTKQLRALLGGLTYYRKFLPQMAKRVRPLTTLLKKDVKFEFMDSMESAVRQLLAELASPPVLVYPDWDAVSDG 483          
BLAST of mRNA_F-serratus_M_contig122.1708.1 vs. uniprot
Match: A0A6H5JR23_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR23_9PHAE)

HSP 1 Score: 224 bits (571), Expect = 1.110e-67
Identity = 122/289 (42.21%), Postives = 177/289 (61.25%), Query Frame = 1
Query:    1 NPAVAREVDSIIEKYLKAGIKRCSQQPYAAPIVVLLKKKGKIRFTCEYRRRNEATVIPQTQIPRIDKILDTLGSAKFLSSFDMVSGFHPVVIGETSVPLTAFCTASGSYEFLVMPTGTSDSPGHFQRLMQQVTADLAHFVTIYIDDVLVRSNDEASMVDNIERLLKALTKHNLKISPSKSEVGAEEINVLCHTISPPGVKPDAKKVDPLRKLSMSNRVTELRSLLGGLSYYRQFLPNLSKKLQSTTKQLKKDVPFRFTAEMVTAVRETLSVLIKPPVLVHPDFEAARDG 867
            NP VA++V +I+++YL AG+ + +  PY++P+VV+ KK G +R T  Y + N+   + Q  IPR+D  LD L   +F S FDM S FH + +   ++PLTAF T+SG +E+L MP G S +PG F +++ +V  +L   V  Y+DD++V  +  A+ V  +  L + L  HNLK++P K+ VGA E + L HTISP GV+P+  KV  L K+ M         LLGGLSYYR+FLPN++K+++  T  L K   F  T  M  A R  L+ L  PPVL  PD++   DG
Sbjct:   35 NPPVAKQVKAILDQYLAAGLIQHATWPYSSPLVVIPKKSGGVRITVNYCKLNKLCALSQLPIPRVDDTLDKLLKGQFHSLFDMKSSFHQITVHRDTIPLTAFVTSSGLFEWLEMPQGRSAAPGWFCKVVNEVIENLRG-VASYLDDLIVFDDTPATHVGTMRALFERLRTHNLKLTPPKATVGATEADFLGHTISPDGVRPNGAKVSALTKMPMPKDC-----LLGGLSYYRKFLPNMAKRIRPLTTVLNKQEKFIVTPSMEQADRVLLAELSNPPVLACPDWDTVSDG 317          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig122.1708.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JUZ4_9PHAE1.470e-7647.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L052_9PHAE1.270e-7546.45Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JFL9_9PHAE1.070e-7445.33Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JJR1_9PHAE6.530e-7244.64Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JUV3_9PHAE1.420e-7143.36Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KWU8_9PHAE1.310e-6941.84Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KCB1_9PHAE2.950e-6940.83Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JBV9_9PHAE3.330e-6943.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K248_9PHAE2.980e-6842.28Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JR23_9PHAE1.110e-6742.21Reverse transcriptase domain-containing protein n=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig122contigF-serratus_M_contig122:434400..435269 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score188.3
Seed ortholog evalue4.9e-45
Seed eggNOG ortholog28532.XP_010541181.1
Hectar predicted targeting categoryother localisation
EggNOG free text desc.3-hydroxyisobutyryl-CoA hydrolase activity
EggNOG OGs37NRU@33090,3GGV0@35493,3HXPF@3699,COG2801@1,KOG0017@2759
COG Functional cat.I
Best tax levelBrassicales
Best eggNOG OGNA|NA|NA
Exons1
Model size870
Cds size870
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929138.2947855-CDS-F-serratus_M_contig122:434399..4352691622929138.2947855-CDS-F-serratus_M_contig122:434399..435269Fucus serratus maleCDSF-serratus_M_contig122 434400..435269 +
1690962720.8545914-CDS-F-serratus_M_contig122:434399..4352691690962720.8545914-CDS-F-serratus_M_contig122:434399..435269Fucus serratus maleCDSF-serratus_M_contig122 434400..435269 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig122.1708.1prot_F-serratus_M_contig122.1708.1Fucus serratus malepolypeptideF-serratus_M_contig122 434400..435269 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig122.1708.1

>prot_F-serratus_M_contig122.1708.1 ID=prot_F-serratus_M_contig122.1708.1|Name=mRNA_F-serratus_M_contig122.1708.1|organism=Fucus serratus male|type=polypeptide|length=290bp
NPAVAREVDSIIEKYLKAGIKRCSQQPYAAPIVVLLKKKGKIRFTCEYRR
RNEATVIPQTQIPRIDKILDTLGSAKFLSSFDMVSGFHPVVIGETSVPLT
AFCTASGSYEFLVMPTGTSDSPGHFQRLMQQVTADLAHFVTIYIDDVLVR
SNDEASMVDNIERLLKALTKHNLKISPSKSEVGAEEINVLCHTISPPGVK
PDAKKVDPLRKLSMSNRVTELRSLLGGLSYYRQFLPNLSKKLQSTTKQLK
KDVPFRFTAEMVTAVRETLSVLIKPPVLVHPDFEAARDG*
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mRNA from alignment at F-serratus_M_contig122:434400..435269+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig122.1708.1 ID=mRNA_F-serratus_M_contig122.1708.1|Name=mRNA_F-serratus_M_contig122.1708.1|organism=Fucus serratus male|type=mRNA|length=870bp|location=Sequence derived from alignment at F-serratus_M_contig122:434400..435269+ (Fucus serratus male)
AATCCAGCGGTAGCGAGAGAAGTCGATTCGATAATCGAGAAGTACCTAAA GGCAGGCATAAAAAGATGCTCGCAACAGCCATATGCCGCTCCAATAGTCG TTCTACTAAAGAAAAAAGGGAAGATTCGATTTACCTGCGAGTATAGGCGT CGTAACGAAGCTACAGTGATCCCACAGACGCAAATCCCTCGTATTGATAA GATATTAGATACGTTAGGATCGGCAAAGTTCTTGAGCTCTTTCGATATGG TGTCCGGATTCCATCCAGTTGTGATTGGAGAAACCAGCGTGCCGCTCACA GCATTTTGCACTGCCTCTGGTTCGTACGAGTTTCTCGTGATGCCTACGGG AACATCAGACTCCCCCGGACACTTTCAACGACTCATGCAGCAAGTTACAG CAGACTTGGCGCATTTCGTGACCATTTACATCGACGATGTGTTGGTTCGT AGTAACGATGAGGCGAGCATGGTTGACAACATTGAAAGGTTGCTGAAGGC TCTTACCAAACATAACCTAAAAATCTCGCCCAGTAAATCAGAGGTTGGTG CCGAAGAGATAAACGTTCTGTGTCATACGATATCACCGCCCGGTGTTAAG CCGGATGCAAAAAAAGTCGACCCATTACGGAAGTTATCTATGTCGAACAG AGTGACGGAGCTAAGATCGCTACTAGGCGGGTTAAGCTATTACCGACAAT TTCTGCCAAATCTATCGAAAAAGCTACAATCGACCACCAAACAACTCAAG AAAGACGTACCGTTCCGCTTCACGGCGGAGATGGTGACAGCTGTACGGGA AACCCTCAGTGTGCTGATAAAGCCTCCAGTGCTGGTGCACCCAGATTTCG AAGCGGCCCGCGATGGCTAG
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Coding sequence (CDS) from alignment at F-serratus_M_contig122:434400..435269+

>mRNA_F-serratus_M_contig122.1708.1 ID=mRNA_F-serratus_M_contig122.1708.1|Name=mRNA_F-serratus_M_contig122.1708.1|organism=Fucus serratus male|type=CDS|length=1740bp|location=Sequence derived from alignment at F-serratus_M_contig122:434400..435269+ (Fucus serratus male)
AATCCAGCGGTAGCGAGAGAAGTCGATTCGATAATCGAGAAGTACCTAAA
GGCAGGCATAAAAAGATGCTCGCAACAGCCATATGCCGCTCCAATAGTCG
TTCTACTAAAGAAAAAAGGGAAGATTCGATTTACCTGCGAGTATAGGCGT
CGTAACGAAGCTACAGTGATCCCACAGACGCAAATCCCTCGTATTGATAA
GATATTAGATACGTTAGGATCGGCAAAGTTCTTGAGCTCTTTCGATATGG
TGTCCGGATTCCATCCAGTTGTGATTGGAGAAACCAGCGTGCCGCTCACA
GCATTTTGCACTGCCTCTGGTTCGTACGAGTTTCTCGTGATGCCTACGGG
AACATCAGACTCCCCCGGACACTTTCAACGACTCATGCAGCAAGTTACAG
CAGACTTGGCGCATTTCGTGACCATTTACATCGACGATGTGTTGGTTCGT
AGTAACGATGAGGCGAGCATGGTTGACAACATTGAAAGGTTGCTGAAGGC
TCTTACCAAACATAACCTAAAAATCTCGCCCAGTAAATCAGAGGTTGGTG
CCGAAGAGATAAACGTTCTGTGTCATACGATATCACCGCCCGGTGTTAAG
CCGGATGCAAAAAAAGTCGACCCATTACGGAAGTTATCTATGTCGAACAG
AGTGACGGAGCTAAGATCGCTACTAGGCGGGTTAAGCTATTACCGACAAT
TTCTGCCAAATCTATCGAAAAAGCTACAATCGACCACCAAACAACTCAAG
AAAGACGTACCGTTCCGCTTCACGGCGGAGATGGTGACAGCTGTACGGGA
AACCCTCAGTGTGCTGATAAAGCCTCCAGTGCTGGTGCACCCAGATTTCG
AAGCGGCCCGCGATGGCTAGAATCCAGCGGTAGCGAGAGAAGTCGATTCG
ATAATCGAGAAGTACCTAAAGGCAGGCATAAAAAGATGCTCGCAACAGCC
ATATGCCGCTCCAATAGTCGTTCTACTAAAGAAAAAAGGGAAGATTCGAT
TTACCTGCGAGTATAGGCGTCGTAACGAAGCTACAGTGATCCCACAGACG
CAAATCCCTCGTATTGATAAGATATTAGATACGTTAGGATCGGCAAAGTT
CTTGAGCTCTTTCGATATGGTGTCCGGATTCCATCCAGTTGTGATTGGAG
AAACCAGCGTGCCGCTCACAGCATTTTGCACTGCCTCTGGTTCGTACGAG
TTTCTCGTGATGCCTACGGGAACATCAGACTCCCCCGGACACTTTCAACG
ACTCATGCAGCAAGTTACAGCAGACTTGGCGCATTTCGTGACCATTTACA
TCGACGATGTGTTGGTTCGTAGTAACGATGAGGCGAGCATGGTTGACAAC
ATTGAAAGGTTGCTGAAGGCTCTTACCAAACATAACCTAAAAATCTCGCC
CAGTAAATCAGAGGTTGGTGCCGAAGAGATAAACGTTCTGTGTCATACGA
TATCACCGCCCGGTGTTAAGCCGGATGCAAAAAAAGTCGACCCATTACGG
AAGTTATCTATGTCGAACAGAGTGACGGAGCTAAGATCGCTACTAGGCGG
GTTAAGCTATTACCGACAATTTCTGCCAAATCTATCGAAAAAGCTACAAT
CGACCACCAAACAACTCAAGAAAGACGTACCGTTCCGCTTCACGGCGGAG
ATGGTGACAGCTGTACGGGAAACCCTCAGTGTGCTGATAAAGCCTCCAGT
GCTGGTGCACCCAGATTTCGAAGCGGCCCGCGATGGCTAG
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