mRNA_F-serratus_M_contig6228.17072.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig6228.17072.1 vs. uniprot
Match: A0A6H5JFG2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFG2_9PHAE) HSP 1 Score: 282 bits (721), Expect = 9.970e-88 Identity = 162/391 (41.43%), Postives = 229/391 (58.57%), Query Frame = 1
Query: 1 RDPRGVSGVSGAVGRLNKAIYELVQAGRCWNNTF--CDMTAIGFEQAKADPCVFRKAVDGEAEMVVVVHVDDILAHAKDKATMDRFAAELGQKFKLKDVGDAEYYMGCHITRNRKTRELKFDQYLYVESMIKRFDVKKEAKVPVASGVPTLSRADEPQSPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVMKIFQYLLHTKDWGITYG-GQGCGLCMEAYTDSDFGACLDTRRSVSCAVLMLAKGAISWHSRMQEVTAAGTSEAEYVALAEAVKDVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDGKHHLVRDASYAKRVRVAYVRSEDQHADLLTKPLDVKKFCKHAKFILNV 1164
R P+G +SG + +L K++Y L QA R W+ C + A+GFEQ AD CVFR DG +++VVHVDDI A ++ D+F A+L + +K++G+ +Y GC RN++T L Q + + + + V VP++SGV LS D + E FP+RE VG+LMW AT TRPDIA AVRAVAR+C +P H A M I Y T +GI++ G G ++ Y D+DF + RRSVS ++ GA+SW SR Q+ T+EAEYVAL + VK++LFLRQ+ FM P + + + VFEDN+GAI+LA N ++ +KHID +HH +R+ K + V +V S Q AD LTK L F H F++N+
Sbjct: 80 RLPQGCGALSGMIVKLGKSLYGLRQASRQWHAMLKRC-LVALGFEQCMADACVFRLIEDGCVVLILVVHVDDIFA-VGERERCDKFGADLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSGV-KLSDFDADEVATE------FPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKSLPKDAFESHRDFVMNL 461
BLAST of mRNA_F-serratus_M_contig6228.17072.1 vs. uniprot
Match: A0A6H5JLN0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLN0_9PHAE) HSP 1 Score: 279 bits (713), Expect = 7.890e-87 Identity = 158/390 (40.51%), Postives = 230/390 (58.97%), Query Frame = 1
Query: 1 RDPRGVSGVSGAVGRLNKAIYELVQAGRCWNNTFCD-MTAIGFEQAKADPCVFRKAVDGEAEMVVVVHVDDILAHAKDKATMDRFAAELGQKFKLKDVGDAEYYMGCHITRNRKTRELKFDQYLYVESMIKRFDVKKEAKVPVASGVPTLSRADEPQSPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVMKIFQYLLHTKDWGITYG-GQGCGLCMEAYTDSDFGACLDTRRSVSCAVLMLAKGAISWHSRMQEVTAAGTSEAEYVALAEAVKDVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDGKHHLVRDASYAKRVRVAYVRSEDQHADLLTKPLDVKKFCKHAKFILNV 1164
R P G +SG + +LNK++Y L QA R W++ + +GF Q AD CVFR +G + +VVHVDDI + +++ D+F +L +K++GD +Y GC R+ LK Q Y E + F V+ ++P+ G+ LS D+ EE+ +P+RE +G+LMW AT TRPDIA AVRAVAR+C +P H +A + I Y++ T D GIT+ G GL ME + D+D+ + RRSVS ++M G ISW SR Q+ T+EAEYV+LA+ +K+VLFLRQV FM P + + VFEDN+GAI+LA N ++ +KHID +HH +R+ K + + +V S QHAD LTK L F H +++++
Sbjct: 56 RLPEGCGRLSGMIVKLNKSLYGLKQASRQWHSHLARCLICLGFIQCMADTCVFRLIEEGRVVVTLVVHVDDIFSIGEEERC-DQFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGL-KLSEFDQ------DEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHVESAYQHADFLTKALHAGDFEFHRNYVMSM 437
BLAST of mRNA_F-serratus_M_contig6228.17072.1 vs. uniprot
Match: A0A6H5KQB8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQB8_9PHAE) HSP 1 Score: 279 bits (713), Expect = 7.960e-85 Identity = 158/390 (40.51%), Postives = 230/390 (58.97%), Query Frame = 1
Query: 1 RDPRGVSGVSGAVGRLNKAIYELVQAGRCWNNTFCD-MTAIGFEQAKADPCVFRKAVDGEAEMVVVVHVDDILAHAKDKATMDRFAAELGQKFKLKDVGDAEYYMGCHITRNRKTRELKFDQYLYVESMIKRFDVKKEAKVPVASGVPTLSRADEPQSPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVMKIFQYLLHTKDWGITYG-GQGCGLCMEAYTDSDFGACLDTRRSVSCAVLMLAKGAISWHSRMQEVTAAGTSEAEYVALAEAVKDVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDGKHHLVRDASYAKRVRVAYVRSEDQHADLLTKPLDVKKFCKHAKFILNV 1164
R P G +SG + +LNK++Y L QA R W++ + +GF Q AD CVFR +G + +VVHVDDI + +++ D+F +L +K++GD +Y GC R+ LK Q Y E + F V+ ++P+ G+ LS D+ EE+ +P+RE +G+LMW AT TRPDIA AVRAVAR+C +P H +A + I Y++ T D GIT+ G GL ME + D+D+ + RRSVS ++M G ISW SR Q+ T+EAEYV+LA+ +K+VLFLRQV FM P + + VFEDN+GAI+LA N ++ +KHID +HH +R+ K + + +V S QHAD LTK L F H +++++
Sbjct: 230 RLPEGCGRLSGMIVKLNKSLYGLKQASRQWHSHLARCLICLGFIQCMADTCVFRLIEEGRVVVTLVVHVDDIFSIGEEERC-DQFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGL-KLSEFDQ------DEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHVESAYQHADFLTKALHAGDFEFHRNYVMSM 611
BLAST of mRNA_F-serratus_M_contig6228.17072.1 vs. uniprot
Match: A0A6H5JWK8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWK8_9PHAE) HSP 1 Score: 265 bits (677), Expect = 4.020e-82 Identity = 152/392 (38.78%), Postives = 229/392 (58.42%), Query Frame = 1
Query: 1 RDPRGVSGVSGAVGRLNKAIYELVQAGRCWNNTF--CDMTAIGFEQAKADPCVFRKAVDGEAEMVVVVHVDDILAHAKDKATMDRFAAELGQKFKLKDVGDAEYYMGCHITRNRKTRELKFDQYLYVESMIKRFDVKKEAKVPVASGVPTLSRADEPQSPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVMKIFQYLLHTKDWGITYG-GQGCGLCMEAYTDSDFGACLDTRRSVSCAVLMLAKGAISWHSRMQEVTAAGTSEAEYVALAEAVKDVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDGKHHLVRDASYAKRVRVAYVRSEDQHADLLTKPLDVKKFCKHAKFILNVV 1167
R P G +SG + +LNK++Y L QA R W C + A+GFEQ AD CVFR DGE +++VVHVDDI A K D+F +LG+ +K +G+ ++Y GC+ R+R+ L Q Y + + +R V+ +P+ PT R + E E +P+R +G+L+W A +TRPDIA AVRAVAR+C P H +A + I Y + T +GI++ G G + + D+D+ + RRSVS V+M A GAI+W S+ Q+ T++AEYVA+A+ K++LFLR+V FM P + ++EDNEGAI++A + ++ +KHID +HH +R K V + +V S+ QHAD LTK L + F H +++N++
Sbjct: 2 RLPEGCGALSGKIVQLNKSLYGLRQASREWYALLKKC-LLALGFEQCMADSCVFRLVEDGEVVLILVVHVDDIFA-VGTKERCDQFGKDLGEYVPVKSLGELQWYSGCYYERDREAGRLTISQETYTKELGERHGVEWGGGIPL----PTTWRLWDSDVNEPSVE---YPFRALIGSLLWVALLTRPDIANAVRAVARYCSEPKLIHWRAALGILGYAVRTSSFGISFQRGTVSGFSLITFADADYASRAADRRSVSGGVVMCAGGAIAWFSKTQKCVTLSTTQAEYVAMADMGKEILFLREVWRFMLPKELRPCIPLYEDNEGAIQIAKHPISNSNSKHIDVRHHFLRQLVDEKEVEIIHVASQYQHADFLTKALPERDFVFHRDYVMNLM 384
BLAST of mRNA_F-serratus_M_contig6228.17072.1 vs. uniprot
Match: A0A6H5J4N2_9PHAE (Integrase catalytic domain-containing protein n=18 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J4N2_9PHAE) HSP 1 Score: 282 bits (721), Expect = 2.150e-81 Identity = 162/391 (41.43%), Postives = 229/391 (58.57%), Query Frame = 1
Query: 1 RDPRGVSGVSGAVGRLNKAIYELVQAGRCWNNTF--CDMTAIGFEQAKADPCVFRKAVDGEAEMVVVVHVDDILAHAKDKATMDRFAAELGQKFKLKDVGDAEYYMGCHITRNRKTRELKFDQYLYVESMIKRFDVKKEAKVPVASGVPTLSRADEPQSPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVMKIFQYLLHTKDWGITYG-GQGCGLCMEAYTDSDFGACLDTRRSVSCAVLMLAKGAISWHSRMQEVTAAGTSEAEYVALAEAVKDVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDGKHHLVRDASYAKRVRVAYVRSEDQHADLLTKPLDVKKFCKHAKFILNV 1164
R P+G +SG + +L K++Y L QA R W+ C + A+GFEQ AD CVFR DG +++VVHVDDI A ++ D+F A+L + +K++G+ +Y GC RN++T L Q + + + + V VP++SGV LS D + E FP+RE VG+LMW AT TRPDIA AVRAVAR+C +P H A M I Y T +GI++ G G ++ Y D+DF + RRSVS ++ GA+SW SR Q+ T+EAEYVAL + VK++LFLRQ+ FM P + + + VFEDN+GAI+LA N ++ +KHID +HH +R+ K + V +V S Q AD LTK L F H F++N+
Sbjct: 1416 RLPQGCGALSGMIVKLGKSLYGLRQASRQWHAMLKRC-LVALGFEQCMADACVFRLIEDGCVVLILVVHVDDIFA-VGERERCDKFGADLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSGV-KLSDFDADEVATE------FPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKSLPKDAFESHRDFVMNL 1797
BLAST of mRNA_F-serratus_M_contig6228.17072.1 vs. uniprot
Match: A0A6H5JG40_9PHAE (Integrase catalytic domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG40_9PHAE) HSP 1 Score: 281 bits (718), Expect = 2.310e-81 Identity = 160/391 (40.92%), Postives = 229/391 (58.57%), Query Frame = 1
Query: 1 RDPRGVSGVSGAVGRLNKAIYELVQAGRCWNNTF--CDMTAIGFEQAKADPCVFRKAVDGEAEMVVVVHVDDILAHAKDKATMDRFAAELGQKFKLKDVGDAEYYMGCHITRNRKTRELKFDQYLYVESMIKRFDVKKEAKVPVASGVPTLSRADEPQSPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVMKIFQYLLHTKDWGITYG-GQGCGLCMEAYTDSDFGACLDTRRSVSCAVLMLAKGAISWHSRMQEVTAAGTSEAEYVALAEAVKDVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDGKHHLVRDASYAKRVRVAYVRSEDQHADLLTKPLDVKKFCKHAKFILNV 1164
R P+G +SG + +L K++Y L QA R W+ C + A+GFEQ AD CVFR DG +++VVHVDDI A ++ D+F A+L + +K++G+ +Y GC RN++T L Q + + + + V VP++SGV LS D + + FP+RE VG+LMW AT TRPDIA AVRAVAR+C +P H A M I Y T +GI++ G G ++ Y D+DF + RRSVS ++ GA+SW SR Q+ T+EAEYVAL + VK++LFLRQ+ FM P + + + +FEDN+GAI+LA N ++ +KHID +HH +R+ K + V +V S Q AD LTK L F H F++N+
Sbjct: 910 RLPQGCGALSGMIVKLGKSLYGLRQASRQWHAMLKRC-LVALGFEQCMADACVFRLIEDGCVVLILVVHVDDIFA-VGERERCDKFGADLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSGV-KLSDFDADEVATD------FPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPIFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKSLSKDAFESHRDFVMNL 1291
BLAST of mRNA_F-serratus_M_contig6228.17072.1 vs. uniprot
Match: A0A6H5K2R1_9PHAE (Integrase catalytic domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2R1_9PHAE) HSP 1 Score: 277 bits (709), Expect = 1.380e-80 Identity = 157/390 (40.26%), Postives = 230/390 (58.97%), Query Frame = 1
Query: 1 RDPRGVSGVSGAVGRLNKAIYELVQAGRCWNNTFCD-MTAIGFEQAKADPCVFRKAVDGEAEMVVVVHVDDILAHAKDKATMDRFAAELGQKFKLKDVGDAEYYMGCHITRNRKTRELKFDQYLYVESMIKRFDVKKEAKVPVASGVPTLSRADEPQSPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVMKIFQYLLHTKDWGITYG-GQGCGLCMEAYTDSDFGACLDTRRSVSCAVLMLAKGAISWHSRMQEVTAAGTSEAEYVALAEAVKDVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDGKHHLVRDASYAKRVRVAYVRSEDQHADLLTKPLDVKKFCKHAKFILNV 1164
R P G +SG + +LNK++Y L QA R W++ + +GF Q AD CVFR +G + +VVHVDDI + +++ D+F +L +K++GD +Y GC R+ LK Q Y E + F V+ ++P+ G+ LS D+ EE+ +P+RE +G+LMW AT TRPDIA AVRAVAR+C +P H +A + I Y++ T D GIT+ G GL ME + D+D+ + RRSVS ++M G ISW SR Q+ T+EAEYV+LA+ +K+VLFLRQV FM P + + VFEDN+GAI+LA N ++ +KHID +HH +R+ K + + +V S QHA+ LTK L F H +++++
Sbjct: 751 RLPEGCGRLSGMIVKLNKSLYGLKQASRQWHSHLARCLICLGFIQCMADTCVFRLIEEGRVVVTLVVHVDDIFSIGEEERC-DQFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGL-KLSEFDQ------DEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHVESAYQHAEFLTKALHAGDFEFHRNYVMSM 1132
BLAST of mRNA_F-serratus_M_contig6228.17072.1 vs. uniprot
Match: A0A6H5JEF2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=7 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEF2_9PHAE) HSP 1 Score: 262 bits (669), Expect = 3.030e-80 Identity = 151/391 (38.62%), Postives = 225/391 (57.54%), Query Frame = 1
Query: 1 RDPRGVSGVSGAVGRLNKAIYELVQAGRCWNN--TFCDMTAIGFEQAKADPCVFRKAVDGEAEMVVVVHVDDILAHAKDKATMDRFAAELGQKFKLKDVGDAEYYMGCHITRNRKTRELKFDQYLYVESMIKRFDVKKEAKVPVASGVPTLSRADEPQSPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVMKIFQYLLHTKDWGITYG-GQGCGLCMEAYTDSDFGACLDTRRSVSCAVLMLAKGAISWHSRMQEVTAAGTSEAEYVALAEAVKDVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDGKHHLVRDASYAKRVRVAYVRSEDQHADLLTKPLDVKKFCKHAKFILNV 1164
R P+G +SG + +L K++Y L QA R W++ T C + +GF Q AD CVFR +G M++VVHVDDI A + K D+F +L + +K++G+ +Y C R+ + L+ Q + E + + ++ VP+ V L+ DE E P+RE VG+LMW AT TRPDIA AVRAVAR+C +P H KA + I Y+ T GIT+ G G+ M+ + D+D+ + RRSVS ++M G ++W SR Q+ T+EAEYVA+A+ +K+VLFLRQV FM P + + VFEDN+GAI++A N + +KHID +HH +R+ K + + +V + QHAD LTK + + H F++N+
Sbjct: 56 RLPQGCGRLSGLIVKLCKSLYGLKQASRHWHSHLTRC-LLLLGFLQCLADACVFRLMEEGRVIMIIVVHVDDIFAVGQ-KERCDKFGEDLNEMVPVKNLGELRWYSACFYERDVERGLLRISQQRFAEELAAEYGIEWGRSVPLPVSV-KLTDFDE------NEACADVPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVPTHFQHADFLTKAISKESLGLHRDFVMNL 437
BLAST of mRNA_F-serratus_M_contig6228.17072.1 vs. uniprot
Match: A0A6H5L4G9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4G9_9PHAE) HSP 1 Score: 259 bits (663), Expect = 3.980e-80 Identity = 147/383 (38.38%), Postives = 223/383 (58.22%), Query Frame = 1
Query: 25 VSGAVGRLNKAIYELVQAGRCWNN--TFCDMTAIGFEQAKADPCVFRKAVDGEAEMVVVVHVDDILAHAKDKATMDRFAAELGQKFKLKDVGDAEYYMGCHITRNRKTRELKFDQYLYVESMIKRFDVKKEAKVPVASGVPTLSRADEPQSPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVMKIFQYLLHTKDWGITYG-GQGCGLCMEAYTDSDFGACLDTRRSVSCAVLMLAKGAISWHSRMQEVTAAGTSEAEYVALAEAVKDVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDGKHHLVRDASYAKRVRVAYVRSEDQHADLLTKPLDVKKFCKHAKFILNV 1164
+SG + +L K++Y L QA R W+ T C + +GF Q AD CVFR +G M++VVHVDDI A + K D+F +L + +K++G+ +Y C R+ + L+ Q + E + + ++ VP+ V L+ DE ++ + P+RE VG+LMW AT TRPDIA AVRAVAR+C +P H KA + I Y+ T GIT+ G G+ M+ + D+D+ + RRSVS ++M G ++W SR Q+ T+EAEYVA+A+ +K+VLFLRQV FM P + + VFEDN+GAI++ N + +KHID +HH +R+ K + + +V ++ QHAD LTK + + F H F++N+
Sbjct: 2 LSGLIVKLCKSLYGLKQASRHWHAHLTRC-LLLLGFLQCLADACVFRLMEEGRVIMIIVVHVDDIFAVGQ-KERCDKFGEDLNEMVPVKNLGELRWYSACFYERDVERGLLRISQQRFAEELAAEYGIEWGRSVPLPVSV-KLTDFDENEASAD------VPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDASMPCIPVFEDNQGAIQIMHNPITNSNSKHIDVRHHFIRELVERKEISITHVPTQFQHADFLTKAISKESFALHRDFVMNL 375
BLAST of mRNA_F-serratus_M_contig6228.17072.1 vs. uniprot
Match: A0A6G0MK94_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=17 Tax=Phytophthora TaxID=4783 RepID=A0A6G0MK94_9STRA) HSP 1 Score: 260 bits (664), Expect = 1.560e-79 Identity = 151/365 (41.37%), Postives = 231/365 (63.29%), Query Frame = 1
Query: 46 LNKAIYELVQAGRCWNNTFCD-MTAIGFEQAKADPCVFRKAVDGEAEMVVVVHVDDILAHAKDKATMDRFAAELGQKFKLKDVGDAEYYMGCHITRNRKTRELKFDQYLYVESMIKRFDVKKEAK---VPVASGVPTLSRADEPQSPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVMKIFQYLLHTKDWGITYGGQGCGLCMEAYTDSDFGACLDTRRSVSCAVLMLAKGAISWHSRMQEVTAAGTSEAEYVALAEAVKDVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDGKHHLVRDASYAKRVRVAYVRSEDQHADLLTKPLDVK 1128
L +++Y L QA R WN T + ++GFE A ADPCV+ + +GE E +V ++VDD+L ++ KA + A + +KF++KD+G A + +G I + + R L Q Y ES+IK+F ++ AK P+ GV L++ADEPQ+ E+K +MK PYR VG+LM+ A TRPDI+ AV ++RF ENPG H A +K+ +YLL TKD GI Y G G +EAY+D+++ D RRSVS +LML + W S Q+ A ++EAEY+AL++ VK+ +++R++ + + +VGA+ ++EDN+GA+ LA N RTKHID ++H +R+ + V + YV +++Q AD +TK L K
Sbjct: 57 LLQSLYGLKQASRVWNETIDKHLKSMGFEPADADPCVYTRG-EGEGECIVCLYVDDMLIASRQKAVIASVKAGIAEKFRIKDLGRARFILGIEIDYDMERRTLGISQKAYTESIIKKFG-QENAKPWLTPLEPGV-QLTKADEPQTEEDKAKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGL-LGTQLEAYSDANWAGNRDDRRSVSGMLLMLCGAPVVWRSTFQKTVALSSTEAEYMALSDCVKECVWMRRLLKDIGAE-QVGAMVIYEDNQGAMALAKNVGYQARTKHIDIRYHFIREKVVSSEVELEYVDTKNQLADFMTKGLSSK 416 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig6228.17072.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig6228.17072.1 >prot_F-serratus_M_contig6228.17072.1 ID=prot_F-serratus_M_contig6228.17072.1|Name=mRNA_F-serratus_M_contig6228.17072.1|organism=Fucus serratus male|type=polypeptide|length=390bp RDPRGVSGVSGAVGRLNKAIYELVQAGRCWNNTFCDMTAIGFEQAKADPCback to top mRNA from alignment at F-serratus_M_contig6228:20444..21613- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig6228.17072.1 ID=mRNA_F-serratus_M_contig6228.17072.1|Name=mRNA_F-serratus_M_contig6228.17072.1|organism=Fucus serratus male|type=mRNA|length=1170bp|location=Sequence derived from alignment at F-serratus_M_contig6228:20444..21613- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig6228:20444..21613- >mRNA_F-serratus_M_contig6228.17072.1 ID=mRNA_F-serratus_M_contig6228.17072.1|Name=mRNA_F-serratus_M_contig6228.17072.1|organism=Fucus serratus male|type=CDS|length=2340bp|location=Sequence derived from alignment at F-serratus_M_contig6228:20444..21613- (Fucus serratus male)back to top |