mRNA_F-serratus_M_contig1007.166.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1007.166.1 vs. uniprot
Match: A0A6H5JUT3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUT3_9PHAE) HSP 1 Score: 501 bits (1290), Expect = 9.780e-162 Identity = 283/488 (57.99%), Postives = 353/488 (72.34%), Query Frame = 3 Query: 810 KNGEEVDEGVVRRSPLLKILAPLVGFLRSRAGSYGAMLGYVAFTISQHITPAYLGVSLLALIGPKSARSIVVIGAQSLSLLTVASYIQDQFRHQVYPLPAVVSGPSAPYAVITGGSSGIGREIANELAGRGYNLLLVARGKEGLNIAAKELMEASREAVEAAKREHKAGSSKTSSKIDARREGR------------------RERERRLRDQRKERKRRMAMQSGGDSEPPVGYSEDSSASHSPVDHALAPETVEQNVGRKMGLKDSSPS----PHLSKAITARWFAADLSNSTAAAAVFDEVKRLNISVEILVNSAGICRVGRVDSLDEEDVMSQLQLNVAGTTAITHPFAKEFVRRQRGRIMIVSSITAASPNPSVAVYAASKSYLSSFAEALHSELESSGVGVTCVMPSATRTAFGDNSGSAEALVWRLPMLCMEADEVAARAVEALMRGDRALIPGWINKLYVHAVGPLVPRKMKMSLLEAFWQ 2207 ++G EVD+ +V RSPLL+ +AP+ F RSRAG YG MLGYV FT+SQHI+P ++G+SLL IGP+ AR ++V+ Q LS+LTVASY+QDQFRHQVYPLP V SGPSAPYA++TGGSSGIGREIANELAGRGYN+LLVARGKEGL AAK+L EASREA E A+RE + G +RR+ R S VG S +SS+ P + +EQ G+ +D++ + PHL++A+TARWFAADL N+T+A AV+ EV+RLN++V+ILVN+AG+CRVGRV++ EED+ SQL LNV GT+ +T FAK+FVRR++GRIM+VSS+ +A+PNP+VA YAASKSYL+SFAEALHSELE SGVGVTCVMP ATRT+F DNSGS ALVW+LP+ MEADEVAARAVEALMRGDR ++PGW NKLYVH + PL+PRK+ MS EA W+ Sbjct: 259 EDGVEVDKELVSRSPLLRTIAPVFRFFRSRAGLYGMMLGYVVFTVSQHISPVFVGMSLLTAIGPRPARKVLVLATQCLSVLTVASYLQDQFRHQVYPLPTVASGPSAPYAIVTGGSSGIGREIANELAGRGYNILLVARGKEGLKRAAKDLTEASREAAEVARREREEGEDDGRQASASRRDXXXXXXXXXXXXXXXXXXXCRSAXXXXXXXXXXXXXXXXTSKRNGSGAAVGLSSNSSSFIGPH----SDRELEQERGKGQEREDAAAATAVAPHLAEAVTARWFAADLGNATSAQAVYAEVQRLNLTVDILVNAAGLCRVGRVNNCAEEDLTSQLMLNVVGTSQLTRLFAKDFVRRRKGRIMVVSSVVSAAPNPTVAAYAASKSYLTSFAEALHSELEVSGVGVTCVMPGATRTSFQDNSGSTAALVWQLPLFSMEADEVAARAVEALMRGDRTVVPGWQNKLYVHVLAPLLPRKIVMSFAEAMWR 742
BLAST of mRNA_F-serratus_M_contig1007.166.1 vs. uniprot
Match: D8LU78_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU78_ECTSI) HSP 1 Score: 339 bits (870), Expect = 3.220e-104 Identity = 211/406 (51.97%), Postives = 259/406 (63.79%), Query Frame = 3 Query: 1143 ITGGSSGIGREIANELAGRGYNLLLVARGKEGLNIAAKELMEASREAVEAAKREHKAG---------------------------------------------SSKTSSKIDARREGRRERERRLRDQRKERKRRMAMQSGGDSEPPVGYSEDSSASHSPVDHALAPETVEQNVGRKMGLKDSSP------SPHLSKAITARWFAADLSNSTAAAAVFDEVKRLNISVEILVNSAGICRVGRVDSLDEEDVMSQLQLNVAGTTAITHPFAKEFVRRQRGRIMIVSSITAASPNPSVAVYAASKSYLSSFAEALHSELESSGVGVTCVMPSATRTAFGDNSGSAEALVWRLPMLCMEADEVAARAVEALMRGDRALIPGWINKLYVHAVGPLVPRKMKMSLLEAFWQ 2207 +TGGSSGIGREIANELAGRGYN+LLVARGKEGL AAKEL EASREA E A+RE + G S TSS ++R G SG +G S +SS P +EQ GR +D++ +P L++A+TARWFAADL N+T+ +V+RLN++V+ILVN+AG+CRVGRV++ EED+ SQL LNV GT+ +T FAK+FVRR++GRIM+VSS+ +A+PNP+VA YAASKSYL+SFAEALHSELE SGVGVTCVMP ATRT+F DNSGS ALVW+LP+ MEADEVAARAVEALMRGDR ++PGW NKLYVH + PL+PRK+ MS EA W+ Sbjct: 37 VTGGSSGIGREIANELAGRGYNILLVARGKEGLKRAAKELTEASREAAEVARREREEGGDDGRQASASXXXXXXXXXXXXXXXXXXXXXXXXSVMSSAXXATPSPSTSSAQTSKRNG----------------------SGA----AIGLSSNSSRFIGPHSEG----GLEQERGRGQEQEDAAAVGATAVAPQLTEAVTARWFAADLGNATST-----QVQRLNLTVDILVNAAGLCRVGRVNNCAEEDLTSQLMLNVVGTSQLTRLFAKDFVRRRKGRIMVVSSVVSAAPNPTVAAYAASKSYLTSFAEALHSELEVSGVGVTCVMPGATRTSFQDNSGSTAALVWQLPLFSMEADEVAARAVEALMRGDRTVVPGWQNKLYVHVLAPLLPRKIVMSFAEAMWR 407
BLAST of mRNA_F-serratus_M_contig1007.166.1 vs. uniprot
Match: A0A835ZD17_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD17_9STRA) HSP 1 Score: 191 bits (485), Expect = 3.490e-50 Identity = 154/451 (34.15%), Postives = 207/451 (45.90%), Query Frame = 3 Query: 927 YVAFTISQHITPAYLGVSLLALIGPKSARSIVVIGAQSLSLLTVASYIQDQFRHQVYPL---------------------PAVVSGPSAPYAVITGGSSGIGREIANELAGRGYNLLLVARGKEGLNIAAKELMEASREAVEAAKREHKAGSSKTSSKIDARREGRRERERRLRDQRKERKRRMAMQSGGDSEPPVGYSEDSSASHSPVDHALAPETVEQNVGRKMGLKDSSPSPHLSKAITARWFAADLSNSTAAAAVFDEVKRL---NISVEILVNSAGICRVGRVDSLDEEDVMSQLQLNVAGTTAITHPFAKEFVRRQR-GRIMIVSSITAASPNPSVAVYAASKSYLSSFAEALHSELESSGVGVTCVMPSATRTAFGDNSGSAEALVWRLPMLCMEADEVAARAVEALMRGDRALIPGWINKLYVHAVGPLVPRKMKMSLLEAFW 2204 YV T H+ P Y+ S + P + + +S +L ++S R++V PL A + APYAV+TG SSGIGR IA +LA +G+N++L+ R ++ L RE A KRE +A GRR L VE ADL+ AV+++V+ L EILVNSAG+ L EE + L +N TT +T FA++ R+ GRIMIVSSITAA PNP VAVYAA+KSYL+S A+AL ELE GVGVTC+MP AT TAF S +A A V++ P LCM +EVA + VE ++RGD ++ GW+NKL V+ PL+PRK+ M L++AFW Sbjct: 4 YVLNTAKTHVLPMYVAASAAQFLSPFWLAKGLQLATRSFFVLFMSSLGVHALRNRVAPLVPPVTRQQXXXXXDASDAQPQDASAAAEGAPYAVVTGASSGIGRAIAADLARQGWNVVLIGRNRDAL-----------REHARALKREARAA-------------GRR---------------------------------------------LQAHVVE----------------------------ADLAVDATPDAVYEQVRALCAEGTQPEILVNSAGVAWDCEFADLPEERLQDMLMINCVATTRLTQLFARDMKERKASGRIMIVSSITAAMPNPKVAVYAATKSYLTSLAQALSVELEPHGVGVTCLMPGATYTAFQARSNAAGARVFKHPRLCMTPEEVARQGVEGMLRGDSLIVTGWMNKLMVNVFEPLLPRKIGMLLVQAFW 357
BLAST of mRNA_F-serratus_M_contig1007.166.1 vs. uniprot
Match: A0A7S0BV49_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BV49_9STRA) HSP 1 Score: 145 bits (365), Expect = 2.730e-34 Identity = 83/203 (40.89%), Postives = 124/203 (61.08%), Query Frame = 3 Query: 1605 ADLSNSTAAAAVFDEVKRLNISVEILVNSAGICRVGRVDSLDEEDVMSQLQLNVAGTTAITHPFAKEFVRRQRGRIMIVSSITAASPN-PSVAVYAASKSYLSSFAEALHSELESSGVGVTCVMPSATR-TAFGDNSGSAEALVWRLPMLCMEADEVAARAVEALMRGDRALIPGWINKLYVHAVGPLVPRKMKMSLLEAFWQ 2207 ADLS A A +++ K+ ++V+IL+N+AGI + ED+ S LQLN A ++ + KE +++RGRI+IVSSI A P P + YAA+K++ SFA +L ELES GVGVTC+MP A + T+F S AL W+ P A EVA+RAV A++ GD ++PGW N+ + PL+P+++ + + E W+ Sbjct: 23 ADLSQPEAPAQIYEATKKNGLNVDILINNAGISQSKDFVETTIEDIDSILQLNTACVAKLSRLYGKEMKQKRRGRILIVSSICGALPAVPGSSAYAATKAFQKSFALSLGKELESYGVGVTCMMPGAVKDTSFSSRSSMDNALCWKYPWYARTAPEVASRAVRAVLSGDAEVVPGWQNRFLLRVAQPLLPQRITVLIAETSWK 225
BLAST of mRNA_F-serratus_M_contig1007.166.1 vs. uniprot
Match: A0A1Q3H505_9BACT (Short-chain dehydrogenase n=1 Tax=marine bacterium AO1-C TaxID=1905359 RepID=A0A1Q3H505_9BACT) HSP 1 Score: 121 bits (303), Expect = 6.220e-27 Identity = 73/192 (38.02%), Postives = 116/192 (60.42%), Query Frame = 3 Query: 1608 DLSNSTAAAAVFDEVKRLNISVEILVNSAGICRVGRVDSLDEEDVMSQLQLNVAGTTAITHPFAKEFVRRQRGRIMIVSSITAASPNPSVAVYAASKSYLSSFAEALHSELESSGVGVTCVMPSATRTAFGDNSGSAEALVWRLPMLCMEADEVAARAVEALMRGDRALIPG--WINKLYVHAVGPLVPRKM 2177 +L+ S A +++EVK I V+ L+N+AG VG+ E ++ +Q+N+ T++T F EFV+R G+I+ VSS + P P A+Y ASK++++SF+ AL EL+ SGV VT ++P AT+TAFG +SG + +++ P E EVA EA++ G + G W +L + +V PL+P+KM Sbjct: 60 NLTLSNATQEIYEEVKEQEIEVDYLINNAGFGGVGKFHERAWEKDLAMIQVNILALTSLTRYFLPEFVKRNTGKILNVSSAVSLVPGPLQAIYFASKAFVTSFSNALSGELDQSGVTVTVLLPGATKTAFGASSGMEKTSIYKNPS---EPSEVAKDGYEAMLAGKLEIFSGVPWSQRLEL-SVAPLMPKKM 247
BLAST of mRNA_F-serratus_M_contig1007.166.1 vs. uniprot
Match: A0A351KI25_9CLOT (Short-chain dehydrogenase n=2 Tax=Clostridiaceae bacterium TaxID=1898204 RepID=A0A351KI25_9CLOT) HSP 1 Score: 118 bits (296), Expect = 5.690e-26 Identity = 69/190 (36.32%), Postives = 115/190 (60.53%), Query Frame = 3 Query: 1608 DLSNSTAAAAVFDEVKRLNISVEILVNSAGICRVGRVDSLDEEDVMSQLQLNVAGTTAITHPFAKEFVRRQRGRIMIVSSITAASPNPSVAVYAASKSYLSSFAEALHSELESSGVGVTCVMPSATRTAFGDNSGSAEALVWRLPMLCMEADEVAARAVEALMRGDRALIPGWINKLYVHAVGPLVPRKM 2177 DL+ A+ V++EVK++NI+V+IL+N+AGI G +D + + +Q+N+ T +T A++ V+R+ G+I+ V+S A P P ++VY A+K+Y+ SF+EA+ +EL+ + VT + P AT+T FG N+G M+ +VA A LM+G R +IPG +NK V ++PR++ Sbjct: 64 DLAQPEASRQVYEEVKKMNINVDILINNAGIGNCGLFHEIDLKKHIDTIQVNITSLTELTRLIAEDMVKRKSGKILNVASTGAYQPGPLISVYYAAKAYVLSFSEAICNELKPYNITVTALCPGATKTEFGKNAGKGNL------KNAMDPKKVAKAAYYGLMKGKRVVIPGTLNKFSVF-FSKIMPRRI 246
BLAST of mRNA_F-serratus_M_contig1007.166.1 vs. uniprot
Match: A0A3E1F1K3_9FLAO (SDR family oxidoreductase n=1 Tax=Brumimicrobium aurantiacum TaxID=1737063 RepID=A0A3E1F1K3_9FLAO) HSP 1 Score: 118 bits (295), Expect = 7.020e-26 Identity = 73/192 (38.02%), Postives = 115/192 (59.90%), Query Frame = 3 Query: 1608 DLSNSTAAAAVFDEVKRLNISVEILVNSAGICRVGRVDSLDEEDVMSQLQLNVAGTTAITHPFAKEFVRRQRGRIMIVSSITAASPNPSVAVYAASKSYLSSFAEALHSELESSGVGVTCVMPSATRTAFGDNSGSAEALVWRLPMLCMEADEVAARAVEALMRGDRALIPG--WINKLYVHAVGPLVPRKM 2177 DL+ + AA ++ EVKRLN++VEIL+N+AG +GR D D +S +QLNV T +T+ F ++F G+I+ VSS + P P AVY ASK++++SF+ AL EL+ + + VT +MP AT + FG SG + +++ P A+ VA + +M+G +I G + KL + + P +P+KM Sbjct: 60 DLTTTNAALEIYQEVKRLNLAVEILINNAGFGGLGRFDERDIATDVSMIQLNVTALTELTYYFLQDFKALNNGKILNVSSTASIMPGPFQAVYYASKAFVASFSNALSEELKHTNITVTNLMPGATASEFGKTSGMNKTDMFKSPA---SAENVAQDGYDGMMKGQLDVITGLTFSQKLMIKMI-PFLPKKM 247
BLAST of mRNA_F-serratus_M_contig1007.166.1 vs. uniprot
Match: A0A537QZE1_9PROT (SDR family oxidoreductase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537QZE1_9PROT) HSP 1 Score: 117 bits (292), Expect = 2.030e-25 Identity = 72/179 (40.22%), Postives = 105/179 (58.66%), Query Frame = 3 Query: 1602 AADLSNSTAAAAVFDEVKRLNISVEILVNSAGICRVGRVDSLDEEDVMSQLQLNVAGTTAITHPFAKEFVRRQRGRIMIVSSITAASPNPSVAVYAASKSYLSSFAEALHSELESSGVGVTCVMPSATRTAFGDNSGSAEALVWRLPMLCMEADEVAARAVEALMRGDRALIPGWINKL 2138 AADLS AAAA+ ++ ++ +++L+N+AG+ +GR D +D + LQ+N+ T +T A V R RGRIM+VSS+ P P +AVY ASK+++SS EAL EL +GVGVT + P AT T F +G+ +++ R M A +VA AL G R I G +NK+ Sbjct: 61 AADLSKPAAAAALAHDIGSRSLKIDVLINNAGLGALGRFDRMDFGRISEILQVNIIALTELTRLIAPGMVARGRGRIMLVSSVAGFQPGPRMAVYFASKAFVSSLGEALAYELRGTGVGVTVLCPGATDTEFFKIAGADHSIMARRLRHMMRAGDVARIGYRALAAGRRVAIAGIMNKI 239
BLAST of mRNA_F-serratus_M_contig1007.166.1 vs. uniprot
Match: A0A534VS27_9DELT (SDR family oxidoreductase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A534VS27_9DELT) HSP 1 Score: 116 bits (291), Expect = 2.620e-25 Identity = 75/190 (39.47%), Postives = 107/190 (56.32%), Query Frame = 3 Query: 1584 ITARWFAADLSNSTAAAAVFDEVKRLNISVEILVNSAGICRVGRVDSLDEEDVMSQLQLNVAGTTAITHPFAKEFVRRQRGRIMIVSSITAASPNPSVAVYAASKSYLSSFAEALHSELESSGVGVTCVMPSATRTAFGDNSGSAEALVWRLPMLCMEADEVAARAVEALMRGDRALIPGWINKLYVHAV 2153 +TAR ADL A+ V DEVKRL + +E LVN+AG G L+ + +Q+NVA A+T F V R+RGRI+ V S P P +AVY ASK++++SF EAL EL +GV T P AT T F D +G++ +L++RL +VA + A+M+G ++ G NKL V ++ Sbjct: 51 VTARVVTADLGARDGASRVVDEVKRLGLEIEFLVNNAGFGTSGAFVELEVGRQLEMIQVNVAALVALTRAFLPAMVARRRGRILNVGSTAGFPPGPFMAVYYASKAFVNSFTEALSYELRGTGVTATVSCPGATATEFADVAGNSRSLLFRLG--AASPAKVARQGYRAMMKGKPMVVHGLRNKLTVQSL 238
BLAST of mRNA_F-serratus_M_contig1007.166.1 vs. uniprot
Match: A0A661ZUQ3_9BACT (Short-chain dehydrogenase n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A661ZUQ3_9BACT) HSP 1 Score: 117 bits (292), Expect = 2.740e-25 Identity = 70/191 (36.65%), Postives = 106/191 (55.50%), Query Frame = 3 Query: 1599 FAADLSNSTAAAAVFDEVKRLNISVEILVNSAGICRVGRVDSLDEEDVMSQLQLNVAGTTAITHPFAKEFVRRQRGRIMIVSSITAASPNPSVAVYAASKSYLSSFAEALHSELESSGVGVTCVMPSATRTAFGDNSGSAEALVWRLPMLCMEADEVAARAVEALMRGDRALIPGWINKLYVHAVGPLVPR 2171 F+ DL+ A +++E+KR NI +++L+N+AG G+ D E LQLN+ T +T F K+ V R G+I+ VSS +A P P +++Y ASK+Y+ SF+EA+ E++ +GV VT + P +T F E + L + + + VA AL RGDR IPG N+ VH V +PR Sbjct: 57 FSKDLTKPNAVKEIYNELKRQNIKIDVLINNAGFGNFGKFYDTDWEKEAKMLQLNIFALTHLTKLFLKDMVDRGEGKILNVSSTSAFQPGPLMSIYYASKAYVQSFSEAIAKEVKGTGVTVTTLCPGPVKTGFQKRVSDIEPRLINLNLA--DPESVARYGYRALQRGDRVAIPGLFNQFLVHTVN-FIPR 244 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1007.166.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1007.166.1 >prot_F-serratus_M_contig1007.166.1 ID=prot_F-serratus_M_contig1007.166.1|Name=mRNA_F-serratus_M_contig1007.166.1|organism=Fucus serratus male|type=polypeptide|length=707bp MTGSKRLLAGPLLLLLPGFQRGDAFGVSFANRPPVLVGSSEPLSIGRVRSback to top mRNA from alignment at F-serratus_M_contig1007:169324..196202+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1007.166.1 ID=mRNA_F-serratus_M_contig1007.166.1|Name=mRNA_F-serratus_M_contig1007.166.1|organism=Fucus serratus male|type=mRNA|length=26879bp|location=Sequence derived from alignment at F-serratus_M_contig1007:169324..196202+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1007:169324..196202+ >mRNA_F-serratus_M_contig1007.166.1 ID=mRNA_F-serratus_M_contig1007.166.1|Name=mRNA_F-serratus_M_contig1007.166.1|organism=Fucus serratus male|type=CDS|length=4242bp|location=Sequence derived from alignment at F-serratus_M_contig1007:169324..196202+ (Fucus serratus male)back to top |