prot_F-serratus_M_contig12.1552.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig12.1552.1
Unique Nameprot_F-serratus_M_contig12.1552.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length136
Homology
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BLAST of mRNA_F-serratus_M_contig12.1552.1 vs. uniprot
Match: D8LFE3_ECTSI (Abortive infection protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFE3_ECTSI)

HSP 1 Score: 77.8 bits (190), Expect = 3.630e-14
Identity = 57/136 (41.91%), Postives = 74/136 (54.41%), Query Frame = 0 
Query:    2 ALSLTADPRCWAAFAPPPFGPPLQRCLLTPRSGRAPI-GKLESQPWVLRELSERNHRKSSLAKNSRIKMAGTEAGTEKGDGMLRSPNLGLLRILVKGEVAVGTAAAILAVILQVNPLSGLGLTSSAFVTGCLGALP 136
            A +L   P    AF P   GP            R P  G+L S+PWV   ++      + +  +  +KMA   A   KG GML+ PNL L+RILV+GEVAVGTAAA LA + +VNP +G   + +A   GCLGALP
Sbjct:   13 ANTLFVSPAVKPAFLPQRHGPAT--------FNRPPTAGQLSSRPWVA--IAPFGGASTRMHGSGSVKMA---AEKPKGSGMLQGPNLELMRILVQGEVAVGTAAAGLAFLTKVNPFAGTLFSWAALKAGCLGALP 135
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig12.1552.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LFE3_ECTSI3.630e-1441.91Abortive infection protein n=2 Tax=Ectocarpus TaxI... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 93..111
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 117..135
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 112..116
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..92
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 136..136

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig12contigF-serratus_M_contig12:870106..881406 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig12.1552.1mRNA_F-serratus_M_contig12.1552.1Fucus serratus malemRNAF-serratus_M_contig12 869929..881406 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig12.1552.1 ID=prot_F-serratus_M_contig12.1552.1|Name=mRNA_F-serratus_M_contig12.1552.1|organism=Fucus serratus male|type=polypeptide|length=136bp
MALSLTADPRCWAAFAPPPFGPPLQRCLLTPRSGRAPIGKLESQPWVLRE
LSERNHRKSSLAKNSRIKMAGTEAGTEKGDGMLRSPNLGLLRILVKGEVA
VGTAAAILAVILQVNPLSGLGLTSSAFVTGCLGALP
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