mRNA_F-serratus_M_contig12.1545.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig12.1545.1
Unique NamemRNA_F-serratus_M_contig12.1545.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
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BLAST of mRNA_F-serratus_M_contig12.1545.1 vs. uniprot
Match: D8LFD7_ECTSI (Fructose-2,6-bisphosphatase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFD7_ECTSI)

HSP 1 Score: 278 bits (712), Expect = 5.870e-81
Identity = 148/245 (60.41%), Postives = 179/245 (73.06%), Query Frame = 3 
Query:  564 AASPQLLFLVRHGETDMNATGKLQGRGVDAKLNGVGIRQATELGTFLRNVPFDTVASSSLRRAHETAVIVAEQNVKCAKQAQTNEP-----PADSTSRIE-------DCGDGDEKQVPVKKYEGVDELSWGELEGQDAAQEPWKSKLEALRGGWDAGHFDRAARNGESVIDVEARSRKAVESCLEGGKALNLIVSHGRTLRILILSLTGVGLDNMTNMGKVPNTALYVLEARRSSAGGARSYHLL 1262
            A + QLLFLVRHGETDMN  G+LQGRGV+A LNG G+ QA  LG F+RNVPFDTV SSSL RAHETA+ +AE N  C K AQ N+P     P+ ST   E       D   GD+ QV V++ EG+DELSWGELEG+D+  EP+K  L AL+  WD G FDRAA  GE++++V+AR+R AVE+ L+ GK LNL+VSHGRTLRIL+LSLTG+G+D MTNMGK+PN   Y+LE RRS    ARSY LL
Sbjct:  158 APTSQLLFLVRHGETDMNKAGRLQGRGVNAPLNGAGLDQAQGLGRFVRNVPFDTVTSSSLLRAHETAMRIAENNEMCLKLAQENDPVPPVPPSTSTKEQEGEKTTPADFCCGDKAQVRVRRLEGLDELSWGELEGEDSKLEPFKGCLAALKEAWDEGVFDRAAEGGENLVEVQARARAAVETILDRGKELNLVVSHGRTLRILMLSLTGLGMDQMTNMGKIPNCGTYILEVRRSGPAAARSYRLL 402
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BLAST of mRNA_F-serratus_M_contig12.1545.1 vs. uniprot
Match: A0A7S3Y0U4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y0U4_HETAK)

HSP 1 Score: 142 bits (357), Expect = 8.490e-34
Identity = 86/213 (40.38%), Postives = 118/213 (55.40%), Query Frame = 3 
Query:  570 SPQLLFLVRHGETDMNATGKLQGRGVDAKLNGVGIRQATELGTFLRNVPFDTVASSSLRRAHETAV-IVAEQNVKCAKQAQTNEPPADSTSRIEDCGDGDEKQVPVKKYEGVDELSWGELEGQDAAQEPWKSKLEALRGGWDAGHFDRAARNGESVIDVEARSRKAVESCLEGGKAL-------NLIVSHGRTLRILILSLTGVGLDNMTNMG 1184
            S   +F+ RHG+TDMNA G LQGRGV+A LN +G  Q   LG FL+N  FDT++ S+L R++ETA  I+   N  C                         K  P+ +Y  ++ELSWGELEGQ A +EPW+SK +     W  G  D  A NGES  +V AR+R A+E+ +             +L+VSHGRT+R L+  L GV ++++ N G
Sbjct:   85 SRHYVFIARHGQTDMNAGGFLQGRGVNANLNDIGREQGRALGDFLKNTKFDTISCSTLIRSYETAEEILKMNNFMC-------------------------KATPIAQYVDLEELSWGELEGQCAREEPWRSKFKHTVQMWREGKNDYKAVNGESPNEVAARARGALEAIVAQXXXXXXXXXXRHLVVSHGRTIRSLLDGLAGVRMESVPNCG 272
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BLAST of mRNA_F-serratus_M_contig12.1545.1 vs. uniprot
Match: A0A7S2UWM8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWM8_9STRA)

HSP 1 Score: 137 bits (345), Expect = 8.100e-32
Identity = 89/240 (37.08%), Postives = 136/240 (56.67%), Query Frame = 3 
Query:  552 PGFTAASPQLLFLVRHGETDMNATGKLQGRGVDAKLNGVGIRQATELGTFLRNVPFDT----VASSSLRRAHETA-------------VIVAEQNVKCAKQAQT-NEPPADSTSRIEDCGDGDEKQVPVKKYEGVDELSWGELEGQDAAQEPWKSKLEALRGGWDAGHFDRAARNGESVIDVEARSRKAVESCLEGGKALNLIVSHGRTLRILILSLTGVGLDNMTNMGKVPNTALYVLE 1217
            P  ++   QL++LVRHG+TDMN  G LQGRGV+A LN  G  QA   G FL ++        + SS+L RA +TA             V +  ++VK A  A   +E  +   S         ++Q+P   YE  +ELSWG +EG+   +EP+++ L+ ++  WD+G+ D +   GES + V  RS +A+++ L  G   N+IVSHGRT+R+++ SL G  L+      KVPNTA+Y+++
Sbjct:   76 PNISSKPGQLIYLVRHGQTDMNKRGCLQGRGVNADLNVHGQFQAMTAGKFLSSLGSTDQDVFLCSSTLSRAKQTAQAISTFLPTSRDEVAIMRKSVKNALSAYGGSEVQSAPVSSYPSSPTSSDEQIP--SYEDFEELSWGIMEGKSWKEEPYRTMLQEVKKQWDSGNLDASILGGESQLQVRKRSLQALDTVLSKGHKHNIIVSHGRTIRVMLNSLIGKTLE------KVPNTAIYIIQ 307
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BLAST of mRNA_F-serratus_M_contig12.1545.1 vs. uniprot
Match: A0A6N8KX41_9SPHI (Histidine phosphatase family protein n=1 Tax=Sphingobacterium humi TaxID=1796905 RepID=A0A6N8KX41_9SPHI)

HSP 1 Score: 117 bits (293), Expect = 4.110e-26
Identity = 75/213 (35.21%), Postives = 109/213 (51.17%), Query Frame = 3 
Query:  582 LFLVRHGETDMNATGKLQGRGVDAKLNGVGIRQATELGTFLRNVPFDTVASSSLRRAHETAVIVAEQNVKCAKQAQTNEPPADSTSRIEDCGDGDEKQVPVKKYEGVDELSWGELEGQDAAQEPWKSKLEALRGGWDAGHFDRAARNGESVIDVEARSRKAVESCLEGGKALNLIVS-HGRTLRILILSLTGVGLDNMTNMGKVPNTALYVLE 1217
            ++ +RHG+TD+N  G +QGRGV++ LN  G +QA       ++VPFD V +S+L R H+T     EQ                               +P ++ EG+DE+SWG  EGQ+  +E      E + G W     D A  NGES   + AR +KA+E  L+  +   ++V  HGR LRI++  LT V + NM +     NTALY+LE
Sbjct:    5 IYFIRHGQTDLNLKGIVQGRGVNSPLNENGFQQAQAFYDAYKDVPFDKVYTSTLLRTHQTVAPFIEQG------------------------------IPTEELEGLDEISWGIYEGQEQTKEILDG-FELVVGSWRNNELDLAIENGESPNTLVARQKKAIEHILKNKEEETVLVCMHGRALRIMLCHLTKVPVCNMDDFPHT-NTALYILE 185
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BLAST of mRNA_F-serratus_M_contig12.1545.1 vs. uniprot
Match: UPI0003B6969E (histidine phosphatase family protein n=1 Tax=Salisaeta longa TaxID=503170 RepID=UPI0003B6969E)

HSP 1 Score: 114 bits (286), Expect = 4.150e-25
Identity = 84/231 (36.36%), Postives = 118/231 (51.08%), Query Frame = 3 
Query:  537 VPMGSPGFTAASPQLLFLVRHGETDMNATGKLQGRGVDAKLNGVGIRQATELGTFLRNVPFDTVASSSLRRAHETAVIVAEQNVKCAKQAQTNEPPADSTSRIEDCGDGDEKQVPVKKYEGVDELSWGELEGQDAAQEPWKSKLEALRGGWDAGHFDRAARNGESVIDVEARSRKAVESCLEG--GKALNLIVSHGRTLRILILSLTGVGLDNMTNMGKVPNTALYVLEAR 1223
            +P+ SP   A +   L+LVRHGET+ N  G +QGRG+DA LN  G  QA  LG     V FD    S LRR  +TA +V                    T+R         + +P    + ++E++WG  EG+  A +   + + A++  W AG  D     GES  DVEAR+++AV   LE   G+ + L+V+HGR LR+L+ S+   GL NM  MG   NT +  LE R
Sbjct:    1 MPVSSPVDVATTT--LYLVRHGETEYNRQGIVQGRGIDADLNATGRAQAKALGERFATVDFDVAYVSPLRRTRQTARLV--------------------TAR--------HRPLPTIYLKDLEEMAWGVYEGEPPAPDR-DAAMNAIKEQWRAGTVDLPIEGGESPRDVEARAQRAVHHMLEASAGRTI-LVVTHGRYLRVLLASVLERGLHNMHEMGHA-NTCVNHLEYR 198
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BLAST of mRNA_F-serratus_M_contig12.1545.1 vs. uniprot
Match: A0A4V1IRZ1_9FUNG (Putative phosphoglycerate mutase (Fragment) n=1 Tax=Blyttiomyces helicus TaxID=388810 RepID=A0A4V1IRZ1_9FUNG)

HSP 1 Score: 110 bits (275), Expect = 7.830e-24
Identity = 75/189 (39.68%), Postives = 98/189 (51.85%), Query Frame = 3 
Query:  582 LFLVRHGETDMNATGKLQGRGVDAKLNGVGIRQATELGTFLRNVPFDTVASSSLRRAHETAVIVAEQNVKCAKQAQTNEPPADSTSRIEDCGDGDEKQVPVKKYEGVDELSWGELEGQDAAQEPWKSKLEALRGGWDAGHFDRAARNGESVIDVEARSRKAVESCLEGGKALNLIVSHGRTLRILILSL 1148
            L+L RHGET++NA G LQGRGVD  LN  G +QA  L     NVP D   SS L+RA +TA IV        KQ   N P A                 P+ + EG+ E+SWG+ EG+          L  L   W+ G +D  + +GES +DVE RS  A+   LE  +   L+V HGR LRI++ S+
Sbjct:   17 LYLCRHGETELNANGVLQGRGVDQYLNETGRKQAELLRDRFANVPIDVFVSSRLKRAKQTAEIV--------KQ---NHPDA-----------------PLVEIEGLAEISWGDWEGEKVPA------LNGLLASWEDGKYDAKSPSGESPMDVEERSVPALYGMLERPEQTFLVVVHGRLLRIMMSSI 171
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BLAST of mRNA_F-serratus_M_contig12.1545.1 vs. uniprot
Match: A0A5S9ID91_RHOMR (Phosphoglycerate mutase n=4 Tax=Rhodothermus marinus TaxID=29549 RepID=A0A5S9ID91_RHOMR)

HSP 1 Score: 110 bits (275), Expect = 1.390e-23
Identity = 74/190 (38.95%), Postives = 100/190 (52.63%), Query Frame = 3 
Query:  582 LFLVRHGETDMNATGKLQGRGVDAKLNGVGIRQATELGTFLRNVPFDTVASSSLRRAHETAVIVAEQNVKCAKQAQTNEPPADSTSRIEDCGDGDEKQVPVKKYEGVDELSWGELEGQDAAQEPWKSKLEALRGGWDAGHFDRAARNGESVIDVEARSRKAVESCLEGGKALN-LIVSHGRTLRILILSL 1148
            L+ VRHGETD N    +QGRGVDA LN  G RQA  L      VP D + +S LRRA ETA  V   +            PA                VP  +   ++E+ WGELEG+  A  P+ +K+ A+   W AG +D     GES++DV+ R+ +A+E+ L   +    LIV+HGR LRIL+ S+
Sbjct:    6 LYFVRHGETDYNRNSIVQGRGVDAPLNDRGRRQAEALARRFAAVPLDAIYASPLRRALETAEAVRRYH------------PA----------------VPFYQLADLEEMDWGELEGKPYAP-PYDAKIRAIYERWRAGDYDYPVPGGESILDVQRRALRALETILSRHEGETVLIVAHGRFLRILLASV 166
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BLAST of mRNA_F-serratus_M_contig12.1545.1 vs. uniprot
Match: A0A2T3HLC0_9SPHI (Histidine phosphatase family protein n=1 Tax=Pedobacter yulinensis TaxID=2126353 RepID=A0A2T3HLC0_9SPHI)

HSP 1 Score: 109 bits (273), Expect = 1.790e-23
Identity = 77/235 (32.77%), Postives = 118/235 (50.21%), Query Frame = 3 
Query:  582 LFLVRHGETDMNATGKLQGRGVDAKLNGVGIRQATELGTFLRNVPFDTVASSSLRRAHETAVIVAEQNVKCAKQAQTNEPPADSTSRIEDCGDGDEKQVPVKKYEGVDELSWGELEGQ---DAAQEPWKSKLEALRGGWDAGHFDRAARNGESVIDVEARSRKAVESCLEGGKALNLIVS-HGRTLRILILSLTGVGLDNMTNMGKVPNTALYVLEARRSSAGGARSYHLLAPTS 1274
            L+++RHGET++N  G +QGRG+DA LN  G  QA       +NVPFD V +S+L+R H+T                             D G      +P ++  G+DEL+WGE EGQ   + A+E ++  +E     W  G++D   + GES  +V  R ++A+++     +   ++V  HGR LRIL+  L+G  L+ M       NT LY    R S +GG   Y ++ P +
Sbjct:    5 LYIIRHGETELNRLGIVQGRGIDADLNDTGRAQAKAFFDTYKNVPFDKVYTSTLKRTHQTV------------------------QAFIDAG------IPWQQLSGLDELAWGEWEGQPNTEEAREVFRQLVEE----WLNGNYDARLKGGESPQEVAGRLQEALQTIAAAAEEKTVLVCMHGRALRILLCLLSGKPLNQMAEFAHA-NTILY----RVSLSGG--KYDIIDPNN 198
[Close]
BLAST of mRNA_F-serratus_M_contig12.1545.1 vs. uniprot
Match: UPI001B5D94C6 (Histidine phosphatase family protein n=1 Tax=Sphingobacteriaceae bacterium WQ 2009 TaxID=2820698 RepID=UPI001B5D94C6)

HSP 1 Score: 109 bits (273), Expect = 1.790e-23
Identity = 69/213 (32.39%), Postives = 109/213 (51.17%), Query Frame = 3 
Query:  582 LFLVRHGETDMNATGKLQGRGVDAKLNGVGIRQATELGTFLRNVPFDTVASSSLRRAHETAVIVAEQNVKCAKQAQTNEPPADSTSRIEDCGDGDEKQVPVKKYEGVDELSWGELEGQDAAQEPWKSKLEALRGGWDAGHFDRAARNGESVIDVEARSRKAVESCL-EGGKALNLIVSHGRTLRILILSLTGVGLDNMTNMGKVPNTALYVLE 1217
            L+ +RHG+TD+N  G +QGRGV++ LN  G++QA    +  +++PFD V +S+L R H+TA    E                              K +P ++ EG+DE+SWG  EGQ+  +       E +   W AG  D +   GES   ++ R ++A+   + +  +   L+V HGR LRI++  L+GV L  M       NT+LY++E
Sbjct:    5 LYFIRHGQTDLNLRGIVQGRGVNSPLNSTGLKQAEAFHSAYQDIPFDKVYTSTLLRTHQTAQPFLE------------------------------KDIPWEQLEGLDEISWGIYEGQEQNEHIMAGFGEVVAA-WAAGDLDLSIERGESPNTLKRRQQEAIAHIVAQPAEDTVLVVMHGRALRIILCWLSGVDLARMDEFPHT-NTSLYIVE 185
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BLAST of mRNA_F-serratus_M_contig12.1545.1 vs. uniprot
Match: UPI00048273A8 (histidine phosphatase family protein n=1 Tax=Olivibacter sitiensis TaxID=376470 RepID=UPI00048273A8)

HSP 1 Score: 109 bits (273), Expect = 2.040e-23
Identity = 70/214 (32.71%), Postives = 108/214 (50.47%), Query Frame = 3 
Query:  576 QLLFLVRHGETDMNATGKLQGRGVDAKLNGVGIRQATELGTFLRNVPFDTVASSSLRRAHETAVIVAEQNVKCAKQAQTNEPPADSTSRIEDCGDGD-EKQVPVKKYEGVDELSWGELEGQDAAQEPWKSKLEALRGGWDAGHFDRAARNGESVIDVEARSRKAVESCLEGGKALN--LIVSHGRTLRILILSLTGVGLDNMTNMGKVPNTALY 1208
            ++L+++RHGETD+N  G +QGRGV++ LN  G++QA     F ++VPF+ + +S+L R H+T                                DG  +  +P ++ EG+DE+SWG  EG++  +E     L AL  GW  G  D    NGE+   V+ R  +A++  L      +  L+  HGR +R+L+  L G+ L  M       NTALY
Sbjct:    3 KILYIIRHGETDLNKKGIVQGRGVNSPLNETGLKQAELFYEFYKSVPFEKLFTSTLLRTHQTV-------------------------------DGFIQSGIPWEQLEGLDEISWGIYEGKEQTEEVLSGFL-ALTQGWCNGELDSCVENGETPNQVKKRQEQAIDYILNTMSTHSKVLVCMHGRAIRLLLCLLLGIDLSRMDEFPHT-NTALY 183
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig12.1545.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFD7_ECTSI5.870e-8160.41Fructose-2,6-bisphosphatase n=2 Tax=Ectocarpus Tax... [more]
A0A7S3Y0U4_HETAK8.490e-3440.38Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S2UWM8_9STRA8.100e-3237.08Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A6N8KX41_9SPHI4.110e-2635.21Histidine phosphatase family protein n=1 Tax=Sphin... [more]
UPI0003B6969E4.150e-2536.36histidine phosphatase family protein n=1 Tax=Salis... [more]
A0A4V1IRZ1_9FUNG7.830e-2439.68Putative phosphoglycerate mutase (Fragment) n=1 Ta... [more]
A0A5S9ID91_RHOMR1.390e-2338.95Phosphoglycerate mutase n=4 Tax=Rhodothermus marin... [more]
A0A2T3HLC0_9SPHI1.790e-2332.77Histidine phosphatase family protein n=1 Tax=Pedob... [more]
UPI001B5D94C61.790e-2332.39Histidine phosphatase family protein n=1 Tax=Sphin... [more]
UPI00048273A82.040e-2332.71histidine phosphatase family protein n=1 Tax=Olivi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig12contigF-serratus_M_contig12:701184..706882 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score281.6
Seed ortholog evalue5.9e-73
Seed eggNOG ortholog2880.D8LFD7
KEGG koko:K06236
KEGG Pathwayko04151,ko04510,ko04512,ko04611,ko04926,ko04933,ko04974,ko05146,ko05165,map04151,map04510,map04512,map04611,map04926,map04933,map04974,map05146,map05165
Hectar predicted targeting categoryother localisation
EggNOG free text desc.regulation of pentose-phosphate shunt
EggNOG OGsCOG0588@1,KOG0235@2759
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00536,ko04516
Exons5
Model size3017
Cds size1206
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929105.1324203-UTR-F-serratus_M_contig12:701183..7012541622929105.1324203-UTR-F-serratus_M_contig12:701183..701254Fucus serratus maleUTRF-serratus_M_contig12 701184..701254 +
1690962707.0567696-UTR-F-serratus_M_contig12:701183..7012541690962707.0567696-UTR-F-serratus_M_contig12:701183..701254Fucus serratus maleUTRF-serratus_M_contig12 701184..701254 +
1622929105.2306283-UTR-F-serratus_M_contig12:705142..7068821622929105.2306283-UTR-F-serratus_M_contig12:705142..706882Fucus serratus maleUTRF-serratus_M_contig12 705143..706882 +
1690962707.1244595-UTR-F-serratus_M_contig12:705142..7068821690962707.1244595-UTR-F-serratus_M_contig12:705142..706882Fucus serratus maleUTRF-serratus_M_contig12 705143..706882 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929105.1518562-CDS-F-serratus_M_contig12:701254..7012841622929105.1518562-CDS-F-serratus_M_contig12:701254..701284Fucus serratus maleCDSF-serratus_M_contig12 701255..701284 +
1690962707.0678825-CDS-F-serratus_M_contig12:701254..7012841690962707.0678825-CDS-F-serratus_M_contig12:701254..701284Fucus serratus maleCDSF-serratus_M_contig12 701255..701284 +
1622929105.1686647-CDS-F-serratus_M_contig12:702959..7036161622929105.1686647-CDS-F-serratus_M_contig12:702959..703616Fucus serratus maleCDSF-serratus_M_contig12 702960..703616 +
1690962707.0787282-CDS-F-serratus_M_contig12:702959..7036161690962707.0787282-CDS-F-serratus_M_contig12:702959..703616Fucus serratus maleCDSF-serratus_M_contig12 702960..703616 +
1622929105.1889694-CDS-F-serratus_M_contig12:704042..7042931622929105.1889694-CDS-F-serratus_M_contig12:704042..704293Fucus serratus maleCDSF-serratus_M_contig12 704043..704293 +
1690962707.0870535-CDS-F-serratus_M_contig12:704042..7042931690962707.0870535-CDS-F-serratus_M_contig12:704042..704293Fucus serratus maleCDSF-serratus_M_contig12 704043..704293 +
1622929105.2025936-CDS-F-serratus_M_contig12:704584..7046951622929105.2025936-CDS-F-serratus_M_contig12:704584..704695Fucus serratus maleCDSF-serratus_M_contig12 704585..704695 +
1690962707.09973-CDS-F-serratus_M_contig12:704584..7046951690962707.09973-CDS-F-serratus_M_contig12:704584..704695Fucus serratus maleCDSF-serratus_M_contig12 704585..704695 +
1622929105.2160678-CDS-F-serratus_M_contig12:704985..7051421622929105.2160678-CDS-F-serratus_M_contig12:704985..705142Fucus serratus maleCDSF-serratus_M_contig12 704986..705142 +
1690962707.109211-CDS-F-serratus_M_contig12:704985..7051421690962707.109211-CDS-F-serratus_M_contig12:704985..705142Fucus serratus maleCDSF-serratus_M_contig12 704986..705142 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig12.1545.1prot_F-serratus_M_contig12.1545.1Fucus serratus malepolypeptideF-serratus_M_contig12 701255..705142 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig12.1545.1

>prot_F-serratus_M_contig12.1545.1 ID=prot_F-serratus_M_contig12.1545.1|Name=mRNA_F-serratus_M_contig12.1545.1|organism=Fucus serratus male|type=polypeptide|length=402bp
MVYEDVPAGEGCSVRTDNTAGRLIIDAANETQYRWWPQVEGRSTSPTSSA
GAVHPQDMQPTFEARNRKLASRWFCALPTPNTDTDPDTPSRSSAEDVDRS
TAVSYPTDSTSSNTASDNATSGEDDDHTTEGKGIPSSYHDPPMANHASTA
EETGMVPMGSPGFTAASPQLLFLVRHGETDMNATGKLQGRGVDAKLNGVG
IRQATELGTFLRNVPFDTVASSSLRRAHETAVIVAEQNVKCAKQAQTNEP
PADSTSRIEDCGDGDEKQVPVKKYEGVDELSWGELEGQDAAQEPWKSKLE
ALRGGWDAGHFDRAARNGESVIDVEARSRKAVESCLEGGKALNLIVSHGR
TLRILILSLTGVGLDNMTNMGKVPNTALYVLEARRSSAGGARSYHLLAPT
S*
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mRNA from alignment at F-serratus_M_contig12:701184..706882+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig12.1545.1 ID=mRNA_F-serratus_M_contig12.1545.1|Name=mRNA_F-serratus_M_contig12.1545.1|organism=Fucus serratus male|type=mRNA|length=5699bp|location=Sequence derived from alignment at F-serratus_M_contig12:701184..706882+ (Fucus serratus male)
CTGGGGGAAGAGCGATCGCCGTTAACCATCGAAACGGCACTGACCTTCCT
TGGCGTTCCGGTGTAGAAGCGATGGTTTATGAGGATGTGCCCGCGGGAGA
GGTGAGAAGGGCGAGGTGCCCATACCGCATCGTTTGATAGATACTGGTAT
TCATTTTTGGCTGGCAAACATGCGGTGCAATATACAAGAGACTTCGTAGA
GCCGTATAATAGCGTGACAGAACCGCTTAGATCTACTATACAGCATCTGT
GCCGTAGCCCTGACAAGTATGAAGCGTGGAATCTGGTTCTTTCCGCTTGC
CTCTTACCTCCTTGTGTGATCGCCTACTGCTCTTCGTCTACTTCCAGGTG
AATACGGGTTCGTGTACTTGGATTATGAAGATTCTTCAACGTGATCCTCT
GTTTTTGTCTTTTTTCAATGCTGTGTTGGTTTCGTCTTCAATGTTTGATG
ATGTTTTGTCTCGCTGTTTTTCTGGTGTCCCTGCATGGCGATTATTGTAA
GTGTACAGTATAACGGTGGGTCTCTCCCCGATATTATACTGTTGACCCAA
TGGCACCACCATAGGGGAACCTGTTTAAATGTCATGAAGAGGTTTTGTAT
TTGCAGCCTTTGAGCCGACCTGAACGTTTTGACATTTTTTCCCCCTGACT
GGGGGATGCTCAGAAGGTCTAGGTGCGTTCTGTATTTTCTTCATACACAA
GCAGTACACAGCAGTCCGTATACTGTCGTACCACATCTCTAAATTTGGGC
CAATATTCTGCTTGTTGCCGAAGCAGCTCGATTGTTTAGGGCAGTATGGA
TCGGTCACCCGGCGGTTGAACCCATCCCGACCGTCAGCAAACGCAGACAC
TTTGACGCACAGCCTCGGATTGCCTACGTGGCCCTCCTGCAAATTGTGCA
TACCGTTCGCTTGTTGGCTCCTCCGCCGCCACAAACAGTATTCCCACTCG
TACAGTATGTATGTATGTATGTATGTATGTATGGTCGTCACATATATAGC
AGAGTATGGATCAAACGGGTAAGGTTGCCAATCCTGCTCGTGGTCTGCTG
AACAAGGAAAATAAATATTCCCCTGTCCCCGTGCGTGCCTGAGAATTTGG
TCTCGCGAGACGGGTTCAGCCGTCCCGTCCCGCGTCAGCCTGCTCATCTC
CATACTCAGGCTGAATCTGGTGCTTCCTTACGGGATTCCTCCCGAGTTCC
GCGGCGGCGTCCATTTATGAAACCGCCATACGCCATCGGGTCAGTCCCGA
GTTTATCGGGTCACGCAGTTGCGTACCGATGGCGTTCACTGCCGAGAGTC
CGCCGGCACAGGGCCAGTAAACCTCAAGGTAGTTCCGAACGAGTGCTGCC
TTAGCAAGTCACTATGGACCAATTAATATTCGCCTCTCTTTCCCACCCCC
ACTATTGGTATGAAGTGGGCATGTTGAAAGTAACGGCGGTATGATGCACC
GAAAATATCACGTGTTGTACTTTGTACCTGGTACTTGTGTTGCGAACAAC
CTTCCAGCAATAGGTCAACGAATCTATTTGTAGCACTTACAGATCTGTGC
TTGAAATCGGGGAAGTGTTTTCCGCCGCAAACTCAATCCCTCCTTCGCGT
CTTCTCCCCGGCAATAATCTGGCCGCTATTAATAGACCGTGAGGCGATTT
CTCGCTCACCACTTTGACTTTCAACCCGGGGGTGCACACATCCGGCCATT
TGCTAATGTCGCGAAAGATTCCCGACTCTTTACATGGATCGTCCGCTTTG
TCGTTCCGACTGGTGGTCTAATCAAGGGATGTTCTGTCCGAACGGACAAC
ACCGCGGGAAGACTGATCATCGACGCTGCCAATGAGACTCAGTATCGATG
GTGGCCACAGGTGGAGGGCCGGTCTACTAGTCCCACCTCTTCTGCTGGTG
CTGTGCATCCCCAAGACATGCAACCCACGTTCGAGGCCCGCAACCGAAAA
TTGGCGAGCCGGTGGTTCTGTGCTCTCCCTACACCGAACACTGATACCGA
CCCCGATACACCGTCCCGTTCCTCCGCTGAAGACGTCGACCGGAGCACGG
CGGTAAGTTACCCCACTGACAGTACCAGCAGCAACACCGCCTCCGACAAC
GCTACATCCGGCGAAGATGATGATCACACAACAGAAGGGAAAGGAATTCC
GTCTTCGTATCATGACCCCCCGATGGCCAACCACGCGTCGACCGCCGAGG
AAACAGGTATGGTACCGATGGGATCTCCTGGATTCACGGCGGCGTCCCCC
CAGCTGCTATTCCTCGTGCGGCATGGAGAGACCGACATGAACGCGACTGG
CAAGCTTCAAGGGCGAGGTGTCGACGCTAAGCTGAATGGCGTCGGGATCC
GGCAGGCCACTGAGCTCGGCACATTTTTGCGCAACGTTCCGTTTGATACC
GTTGCATCGAGCTCTCTGCGTCGGGCGCACGAGGTACGTCAACTGCTGTA
TACTATATTATCAATACCAAATGAAAGCAGTGAAGCAAATATATATTTTA
GTTTTGCACATAAAGGTTGCGGCTAGGACGACGATAATCAGTTTCGGATC
CATCCCTCTGAGAATGCTCACAAGGCAAGCTACCGGAACGTACAGAAGAA
ATCATCAACAAACGACCCGGATGTTACTTCGTCCTCATTTTTTCCGTAGA
CTGTATCTACTTTTGTGTATACTTTTATGTATACTTTTGAGTTACAGCAA
CTGCGACGAGAGGTTAAGCAGGGACTGAGCACGTTTTTAAGTTTATCGCG
ATGCGAAAAAGCGCGCCTTCGCTTGTAACCGTGGGTGCCACCGCGAGAGA
GTTCAAACGTATCGGCGCGCTCAACCGCCGTACGCATCCCCTCTTATGTT
TGTCATCAGACGGCCGTGATTGTTGCCGAGCAAAACGTGAAGTGTGCCAA
GCAAGCGCAGACGAACGAGCCCCCTGCGGATTCTACGAGTCGGATCGAAG
ATTGCGGCGATGGCGACGAGAAGCAAGTGCCCGTGAAAAAATACGAGGGC
GTGGATGAACTATCGTGGGGTGAGCTGGAGGGGCAGGACGCGGCACAAGA
GCCCTGGAAGAGCAAGCTGGAGGCCCTCAGAGGTGGCTGGGATGCCGGAC
ACTTCGACAGGTCTTCCTCTTTCTCCTCCCCGAGAGAACTTATTGTTTGA
CTTTTGTTCGCTATCTGGTCGGAAGCATCGAGCCCGCTTCCATGAGTAGC
CATCACGACCGAAACGATCCGTTGCCCCACTCCCCCCGAGAAGACAATCC
GCGGTCGGGTCTTATGGGCGAAAAATGATTGATATAATAGATACAGTAGG
TCCTAACCGCCCAAAACGTGGAATCATACCTTCACCATTTCTTTGATGTT
CTTGACGATCCCGTAGAATATATTTTTGGTGACTCTCATGTGTTCGGACA
GGGCTGCTCGCAACGGAGAGAGCGTGATCGATGTCGAGGCAAGGTCTAGG
AAGGCCGTAGAGTCTTGCTTAGAAGGGGGAAAAGCCTTGAACCTCATCGT
CAGCCACGGCAGGTGATGAGAAATTACTCTTTAGCGTACTCTCTAGCATC
CTCTCTCCCAGCGCACCGACCGTTCGTCAACTGTTTCGTTGGAAACCACT
GCTTCATCACAGCCCCTAGATTTTGCTTTAGGTGCCCGTTGTCCTATTAG
TATTAATATGAATTGCTGAAGCATCAGGCTTCGCTCCAGAGAGCATTGCG
CTCAACAATGACTGACTGACTGGACTTCCCCCAACAACCCATGGTATTTT
GTTTGTCGGATGACCTCTTTTTTCTAAAACAAAATGCACGCCTCTCTCGC
AGGACCTTGCGGATTCTTATCCTGTCTCTGACGGGCGTGGGGCTCGACAA
CATGACCAACATGGGTAAGGTACCCAACACGGCCCTGTACGTTCTCGAGG
CTCGACGATCGAGCGCGGGGGGTGCGCGCTCGTATCATCTTCTGGCGCCC
ACGTCTTGATCCTCATGTCCGATTCGATCAAGCACTTAGCGCATCTAATT
ACCTCGGTTGAAGGGAGAGGAGCGTTACAAGAGGAATCCCGATACTTGAA
CGCCTCCCTCCCCCACCAAAAAAGATCTTACTCCCGAGAGTTGAGGGCGA
AAACGACGGGTCTAACTAATATTTTAGGAGTATTTCTATGGGATTCATGG
AAGAAGTTTGATGTAAAGCAAAAGTTACTCAAACAGCAGCGTTTGGCTCA
AACCATACGCGTATCTCTTCTGGTGGCGCAATAATTTTAATCAGTATATA
TCTGTGAAGGTTTCCCTGCGGTCACTTGTGTGCGAGTTTTGGCTCTTAAT
TTTTCTTCTTCTATTTTTTTAGCTTATCAACAACGCTGGCGAAATAGCGC
CCTCAACTATAATCTATGATATGATACCATGCTGAAAGCCCGAAGGACGC
GTGAGGGACATAAGGTATTCAGAGGACCGGCTACGTAGCTCTACTTTATA
CTCCCATGGAGACCCTGATGTCCGAAATAGGATTTACGTAGCACTTGGCG
CATCTAATTACCTCGGTTGAAGGAAGGGGAGCGTTACAAGAGGATTCCCG
GCACTTTAACGCCTCCCTCCCCCACCAAAAAAGATCTTACTCCCGAGAGT
TGAGGGAGAAAACGACGCGTCTAGCTAATATTTTAGGACTATTTCTATGG
GATTCATGGAAGAAGTTTGATGTAAAGCAAAAGTTACTCAAACAGCAGCG
TTTGGTTCAAACCACACGCGCATTTCTTCTGGTGGCGCAAGAATTTTTAT
CAGTATATCTCTGTGAATGTTTCCCTCTGGCCACTTGTGTGCGATATTTG
GCTCTTATATTGTTTTCGCTTTTCGACAGCGCTGGCGAGATAGCGCCCTC
AATTATGATCTATGATACGATACCATGCTGAAAGCCCGAAGGACGCGTGA
GGGACCTAAGGTATTCAGAGGACCGGCTACGTAGCTCTACTTTTTACTCC
CATGGAGACCCTGATGTCCGAAACAGGATTTACGTTTCGCCGTGGCGGTC
GTCGAAATGCGACAGATTAATCTTAGTATCAATATTGAGAGTTGCTTCGC
GATTTGAAACACGCCCCCCCCCGCGGCACAATACTAGAATATGAACCTCT
CCCGCACGGGTTTTGTTACACGTGTTTGATTGTCTTCTATAGTAGGGCAT
AGGGTTTTGTGTCGTCGGGGTATCGGTGTATAGCTCCAGAATACGTGCAC
CCGCCATAATGCCGCGGGCAGTTTGTGCGTTCGGTGTCGGTGTTGGAGGC
GGATGTCCCTTCACAAGGCAGGGTAGATCGCGTCGCAGTTTTGCGAGTTG
TCGGAATCTTTGGGTCAAAAACCTCATACTGACGCGCCACGAGTGGCAAG
TCGAACGAGATTGAGAGGCTTCCAAGTTTGGGCTACAGGTATTACTATAC
TATACCTGGTACTATACTATCATTGGTATATTATTACTATAATATACGAA
GAAGGCAAGGCATGTAAAGTAACGGGGTCTAAGGAAGAAGGCTATCTATC
CCAAAAAGTGCCAAACGTGGTTTGAAATATCGTCTCTACCAAGTCTGGAG
AGTTGGAAATAGCAGAATCGTGCTCGCAGCAGCTCAAGTAATCACACAAA
TCGATGTCGTGTGTCGAGGCATGTCGCAGCAAAGGGAGACGAGTATTGCG
CTTCTGAGCCAGTAGAAAGGTTTTCCGGAGGGGCAGCAGCGGAACGCGG
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Coding sequence (CDS) from alignment at F-serratus_M_contig12:701184..706882+

>mRNA_F-serratus_M_contig12.1545.1 ID=mRNA_F-serratus_M_contig12.1545.1|Name=mRNA_F-serratus_M_contig12.1545.1|organism=Fucus serratus male|type=CDS|length=2412bp|location=Sequence derived from alignment at F-serratus_M_contig12:701184..706882+ (Fucus serratus male)
ATGGTTTATGAGGATGTGCCCGCGGGAGAGATGGTTTATGAGGATGTGCC
CGCGGGAGAGGGATGTTCTGTCCGAACGGACAACACCGCGGGAAGACTGA
TCATCGACGCTGCCAATGAGACTCAGTATCGATGGTGGCCACAGGTGGAG
GGCCGGTCTACTAGTCCCACCTCTTCTGCTGGTGCTGTGCATCCCCAAGA
CATGCAACCCACGTTCGAGGCCCGCAACCGAAAATTGGCGAGCCGGTGGT
TCTGTGCTCTCCCTACACCGAACACTGATACCGACCCCGATACACCGTCC
CGTTCCTCCGCTGAAGACGTCGACCGGAGCACGGCGGTAAGTTACCCCAC
TGACAGTACCAGCAGCAACACCGCCTCCGACAACGCTACATCCGGCGAAG
ATGATGATCACACAACAGAAGGGAAAGGAATTCCGTCTTCGTATCATGAC
CCCCCGATGGCCAACCACGCGTCGACCGCCGAGGAAACAGGTATGGTACC
GATGGGATCTCCTGGATTCACGGCGGCGTCCCCCCAGCTGCTATTCCTCG
TGCGGCATGGAGAGACCGACATGAACGCGACTGGCAAGCTTCAAGGGCGA
GGTGTCGACGCTAAGCTGAATGGCGTCGGGATCCGGCAGGCCACTGAGCT
CGGCACATTTTTGCGCAACGTTCCGTTTGATACCGTTGCATCGAGCTCTC
TGCGTCGGGCGCACGAGGGATGTTCTGTCCGAACGGACAACACCGCGGGA
AGACTGATCATCGACGCTGCCAATGAGACTCAGTATCGATGGTGGCCACA
GGTGGAGGGCCGGTCTACTAGTCCCACCTCTTCTGCTGGTGCTGTGCATC
CCCAAGACATGCAACCCACGTTCGAGGCCCGCAACCGAAAATTGGCGAGC
CGGTGGTTCTGTGCTCTCCCTACACCGAACACTGATACCGACCCCGATAC
ACCGTCCCGTTCCTCCGCTGAAGACGTCGACCGGAGCACGGCGGTAAGTT
ACCCCACTGACAGTACCAGCAGCAACACCGCCTCCGACAACGCTACATCC
GGCGAAGATGATGATCACACAACAGAAGGGAAAGGAATTCCGTCTTCGTA
TCATGACCCCCCGATGGCCAACCACGCGTCGACCGCCGAGGAAACAGGTA
TGGTACCGATGGGATCTCCTGGATTCACGGCGGCGTCCCCCCAGCTGCTA
TTCCTCGTGCGGCATGGAGAGACCGACATGAACGCGACTGGCAAGCTTCA
AGGGCGAGGTGTCGACGCTAAGCTGAATGGCGTCGGGATCCGGCAGGCCA
CTGAGCTCGGCACATTTTTGCGCAACGTTCCGTTTGATACCGTTGCATCG
AGCTCTCTGCGTCGGGCGCACGAGACGGCCGTGATTGTTGCCGAGCAAAA
CGTGAAGTGTGCCAAGCAAGCGCAGACGAACGAGCCCCCTGCGGATTCTA
CGAGTCGGATCGAAGATTGCGGCGATGGCGACGAGAAGCAAGTGCCCGTG
AAAAAATACGAGGGCGTGGATGAACTATCGTGGGGTGAGCTGGAGGGGCA
GGACGCGGCACAAGAGCCCTGGAAGAGCAAGCTGGAGGCCCTCAGAGGTG
GCTGGGATGCCGGACACTTCGACAGACGGCCGTGATTGTTGCCGAGCAAA
ACGTGAAGTGTGCCAAGCAAGCGCAGACGAACGAGCCCCCTGCGGATTCT
ACGAGTCGGATCGAAGATTGCGGCGATGGCGACGAGAAGCAAGTGCCCGT
GAAAAAATACGAGGGCGTGGATGAACTATCGTGGGGTGAGCTGGAGGGGC
AGGACGCGGCACAAGAGCCCTGGAAGAGCAAGCTGGAGGCCCTCAGAGGT
GGCTGGGATGCCGGACACTTCGACAGGGCTGCTCGCAACGGAGAGAGCGT
GATCGATGTCGAGGCAAGGTCTAGGAAGGCCGTAGAGTCTTGCTTAGAAG
GGGGAAAAGCCTTGAACCTCATCGTCAGCCACGGCAGGGCTGCTCGCAAC
GGAGAGAGCGTGATCGATGTCGAGGCAAGGTCTAGGAAGGCCGTAGAGTC
TTGCTTAGAAGGGGGAAAAGCCTTGAACCTCATCGTCAGCCACGGCAGGA
CCTTGCGGATTCTTATCCTGTCTCTGACGGGCGTGGGGCTCGACAACATG
ACCAACATGGGTAAGGTACCCAACACGGCCCTGTACGTTCTCGAGGCTCG
ACGATCGAGCGCGGGGGGTGCGCGCTCGTATCATCTTCTGGCGCCCACGT
CTTGAGACCTTGCGGATTCTTATCCTGTCTCTGACGGGCGTGGGGCTCGA
CAACATGACCAACATGGGTAAGGTACCCAACACGGCCCTGTACGTTCTCG
AGGCTCGACGATCGAGCGCGGGGGGTGCGCGCTCGTATCATCTTCTGGCG
CCCACGTCTTGA
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