mRNA_F-serratus_M_contig1197.1511.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1197.1511.1
Unique NamemRNA_F-serratus_M_contig1197.1511.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig1197.1511.1 vs. uniprot
Match: D7G8F2_ECTSI (Decarboxylase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8F2_ECTSI)

HSP 1 Score: 708 bits (1828), Expect = 5.770e-249
Identity = 392/588 (66.67%), Postives = 442/588 (75.17%), Query Frame = 1
Query:    1 RTSPQAGLDQDSTPLVDALEETATKVRSPLFYPGHKMGSGAPSRFVDIILGGKLEALRHDLPELPELDNLFAPEGAIRDAETLAAEAFGAAKTWLLTNGSTCGVLASIIACVQWHNSRLQPVGAVVQSNRAPPPLLRRSVVILPRDAHKSAVHALVLSGATPCFLPPLRHPKSGIGLGISRVSLKAALVEHGEEVAAVLVVSPTYEGACFDVESISNICHATGVPLVVDEAHGAHLAFLEEEDGRSEFPKGEGGTVIHMCSV-------RGSF---AALQCGADLVVQSAHKTLGSLTQSALLHLGHGE-FVSGGPGS--------DSLPQERAVSSALATVQSSSPSYLLLSSLDAARWSLAGGEKEGKRRLQDAVRIVRRVREELSSVQGIDVVDLEGEEGREAGFVGTDPLRLTVSFSGGLGAYDVDDLLTEEFGVYSELPTPEYITFVFGPGSTVEHGRTLTDALRQVVGKATSRQRAASSDDVSLDTSFP---SMRPTVSPRQL-CTPREAFFRPSRPVAAGDAVGLASAETVCPYPPGIPALLPGEEITQEALDLLATVKGAGGFVSGCADTSLATIRVVGE 1695
            +T   AGL+QDSTPLVDAL E A  VRSPLF+PGHKMGSGAPSR VD+ILGGKL+ALRHDLPELPELDNLFAPEG IRDAE LAA+AFGAAKTW+L NGSTCGVLASIIACVQWHNSR    GA +    A     R++VVILPRDAHKSAVHALVLSGATPCFLPPLRHP+SG+GLG+    LKAAL EHG+EVAAV +VSPTYEGAC DV S +  CH  GVPLVVDEAHGAHLAFL E    S                        GSF   AAL+CGADLVVQSAHKTLGSLTQSA LHLG G  F SGG           D    ERAVS ALATVQSSSPSYLLL+SLDAARW LAG +K  KRRL++A RI   VREELSSV+GI+V+DL GE+G  AG VGTDPLRLTVS  GG+G Y+ D++L E+FGVY+ELP P+Y+TFVFGPGSTVEHG+ L +ALR V  +ATSRQ + S    +  T+     +  P   P +L CTPREAFF PS+ V+A DA+G ASAETVCPYPPGIPALLPGE ITQ ALD LA VK +GG +SGC+D +LAT+RVV +
Sbjct:   61 QTRASAGLNQDSTPLVDALAEAAGNVRSPLFFPGHKMGSGAPSRLVDLILGGKLDALRHDLPELPELDNLFAPEGPIRDAELLAADAFGAAKTWMLANGSTCGVLASIIACVQWHNSRAG--GAPLADAPAGSGGGRKNVVILPRDAHKSAVHALVLSGATPCFLPPLRHPESGVGLGVGTAELKAALKEHGDEVAAVFMVSPTYEGACSDVNSAAEACHGAGVPLVVDEAHGAHLAFLGEAQPPSXXXXXXXXXXXXXXXXXRDEHRNNGSFYPRAALRCGADLVVQSAHKTLGSLTQSAFLHLGPGGVFASGGTEGXXXXXXXXDDFSIERAVSDALATVQSSSPSYLLLASLDAARWDLAGTDKNAKRRLREAARIADGVREELSSVEGINVLDLGGEKGSAAGCVGTDPLRLTVSLEGGVGGYEADEILIEDFGVYAELPGPDYVTFVFGPGSTVEHGQRLAEALRHVALEATSRQGSGSGSVAAAGTAQAVEATNTPVPPPSKLMCTPREAFFAPSKTVSAVDAIGQASAETVCPYPPGIPALLPGEVITQAALDALAAVKESGGVISGCSDATLATMRVVAD 646          
BLAST of mRNA_F-serratus_M_contig1197.1511.1 vs. uniprot
Match: A0A6H5K8P0_9PHAE (ADC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8P0_9PHAE)

HSP 1 Score: 516 bits (1330), Expect = 2.210e-176
Identity = 298/527 (56.55%), Postives = 338/527 (64.14%), Query Frame = 1
Query:  109 MGSGAPSRFVDIILGGKLEALRHDLPELPELDNLFAPEGAIRDAETLAAEAFGAAKTWLLTNGSTCGVLASIIACVQWHNSRLQPVGAVVQSNRAPPPLLRRSVVILPRDAHKSAVHALVLSGATPCFLPPLRHPKSGIGLGISRVSLKAALVEHGEEVAAVLVVSPTYEGACFDVESISNICHATGVPLVVDEAHGAHLAFLEEEDGRSEFPKGEGGTVIHMCSVRGSFAALQCGADLVVQSAHKTLGSLTQSALLHLGHGEFVSGGPGSDSLPQERAVSSALATVQSSSPSYLLLSSLDAARWSLAGGEKEGKRRLQDAVRIVRRVREELSSVQGIDVVDLEGEEGREAGFVGTDPLRLTVSFSGGLGAYDVDDLLTEEFGVYSELPTPEYITFVFGPGSTVEHGRTLTDALRQVVGKATSRQRAASSDDVSLDTSFPSMRPTVSPRQLCTPREAFFRPSRPVAAGDAVGLASAETVCPYPPGIPALLPGEEITQEALDLLATVKGAGGFVSGCADTSLATIRVV 1689
            MGSGAPSR VD+ILGGKL+ALRHDLPELPELDNLFAPEG IRDAE LAA+AFGAAKTW+L NGSTCGVLASIIACVQWHNSR  P GA +    A     R+SVVILPRDAHKSAVHALVLSGATPCFLPP+RHP+SG+GLG+    LKAAL EHG+EVAAV +VSPTYEGAC DV S +  CH  GVPLVVDEAHGAHLAFL    G ++ P                                                          D    ERAV+ ALATVQSSSPSYLLL+SLDAARW LAG  K  KRRL++A  I   VREELSSV+GI+V+DL GE G  AG VGTDPLRLTVSF GG+G Y+ D++L E+FGVY+ELP P+Y+TFVFGPGSTVEHG+ L +ALR V   A  ++R A +  V                                                   GIPALLPGE ITQ ALD LA VK +GG +SGC+D +LAT+RVV
Sbjct:    1 MGSGAPSRLVDLILGGKLDALRHDLPELPELDNLFAPEGPIRDAELLAADAFGAAKTWMLANGSTCGVLASIIACVQWHNSR--PGGAPLADAPAGSGGGRKSVVILPRDAHKSAVHALVLSGATPCFLPPIRHPESGVGLGVGTAELKAALKEHGDEVAAVFMVSPTYEGACSDVTSAAEACHGAGVPLVVDEAHGAHLAFL----GEAQPPPSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------DDFSIERAVTDALATVQSSSPSYLLLASLDAARWDLAGATKNAKRRLREAALIADGVREELSSVEGINVLDLGGESGSAAGCVGTDPLRLTVSFEGGVGGYEADEILIEDFGVYAELPGPDYVTFVFGPGSTVEHGQRLAEALRHVALPA--QKRCAHTPQV---------------------------------------------------GIPALLPGEAITQAALDALAAVKESGGVISGCSDATLATMRVV 455          
BLAST of mRNA_F-serratus_M_contig1197.1511.1 vs. uniprot
Match: A0A835Z373_9STRA (Decarboxylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z373_9STRA)

HSP 1 Score: 428 bits (1101), Expect = 3.420e-140
Identity = 264/572 (46.15%), Postives = 324/572 (56.64%), Query Frame = 1
Query:   25 DQDSTPLVDALEETATKVRSPLFYPGHKMGSGAPSRFVDIILGGKLEALRHDLPELPELDNLFAPEGAIRDAETLAAEAFGAAKTWLLTNGSTCGVLASIIACVQWHNSRLQPVGAVVQSNRAPPPLLRRSVVILPRDAHKSAVHALVLSGATPCFLPPLRHPKSGIGLGISRVSLKAALVEHGEEVAAVLVVSPTYEGACFDVESISNICHATGVPLVVDEAHGAHLAFLEEEDGRSEFPKGEGGTVIHMCSVRGSFAALQCGADLVVQSAHKTLGSLTQSALLHLGHGEFVSGGPGSDSLPQ----ERAVSSALATVQSSSPSYLLLSSLDAARWSLAGGEKEGKRRLQDAVRIVRRVREELSSVQGIDVVDLEGEEGREAGFVGTDPLRLTVSFSGGLGAYDVDDLLTEEFGVYSELPTPEYITFVFGPGSTVEHGRTLTDALRQVVGKATSRQRAASSDDV-------------SLDTSFPSMRPTVSPRQLCTPREAFFRPSRPVAAGDAVGLASAETVCPYPPGIPALLPGEEITQEALDLLATVKGAGGFVSGCADTSLATIRVV 1689
            DQ+STP+VDAL E A K+R+PLF+PGHKMG GAP+  VD +LGG + ALRHDLPELPELDNLF P G IRDAE+LAA AFGA++TW L NGST GV A ++ACVQ H                        VVILPR+AHK A+ ALVL+GA P FL P       +   +    L+AAL  H + VAAVLVVSPTY GA  DV +++  C A GVPL+VDEAHG HL F+ ++                         AL+CGAD VVQS+HKTL SLTQSALLH+  G  + GG            E A+S+AL   QSSSP+YLLL+SLDAARW+LA   + G  RL+ A R     R  + ++ G+ V+       R AG    DPL++TV F GG   YD DDLL    GVY+E+P  + +TF                                                  ++  S P+     +PRQL +PREA F  +  VAA  AVG ASAETVC YPPGIP LLPGE +T E L  L  V+ AGG V+GCAD +L T+RVV
Sbjct:   29 DQNSTPIVDALAEAAAKIRAPLFFPGHKMGRGAPAPLVDKLLGGSIAALRHDLPELPELDNLFCPSGPIRDAESLAAAAFGASRTWFLANGSTAGVQALLMACVQRHAXXXXXXXXXXXXXXX------XXVVILPRNAHKCAISALVLTGAAPAFLAPAYDAAMDLCHAVRTDDLRAALSAHSDAVAAVLVVSPTYTGAATDVRALAVACRARGVPLLVDEAHGGHLQFMSDDGXXXXXXX-----XXXXXXXDAPCGALRCGADAVVQSSHKTLASLTQSALLHVRRGGLLDGGXXXXXXXXXPSAEAAISAALEMFQSSSPNYLLLASLDAARWALASERRPGVARLRAAARAAESARARIEALPGLTVL-----RSRHAGGAPMDPLKVTVYF-GGASGYDADDLLIGGHGVYAEMPATKTVTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVAASVPA-----APRQLLSPREAHFARAETVAADAAVGRASAETVCAYPPGIPVLLPGEAVTAECLAFLRRVRRAGGDVTGCADATLETLRVV 578          
BLAST of mRNA_F-serratus_M_contig1197.1511.1 vs. uniprot
Match: A0A7S4BJJ9_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BJJ9_CHRCT)

HSP 1 Score: 402 bits (1034), Expect = 4.070e-130
Identity = 267/612 (43.63%), Postives = 343/612 (56.05%), Query Frame = 1
Query:   22 LDQDSTPLVDALEETATKVRSPLFYPGHKMGSGAPSRFVDIILGGKLEALRHDLPELPELDNLFAPEGAIRDAETLAAEAFGAAKTWLLTNGSTCGVLASIIACVQ-WHNSRLQPVGAVVQSNR--------------------------APPPLLRRSVVILPRDAHKSAVHALVLSGATPCFLPPLRHPKSGIGLGISRVSLKAALVEHGEEVAAVLVVSPTYEGACFDVESISNICHATGVPLVVDEAHGAHLAFLEEEDGRSEFPKGEGGTVIHMCSVRGSFAALQCGADLVVQSAHKTLGSLTQSALLHLGHGEFVSGGPGSDSLPQ-ERAVSSALATVQSSSPSYLLLSSLDAARWSLAGGEKEGKRRLQDAVRIVRRVREELSS--VQGIDVVDLEGEEGREAGFVGTDPLRLTVSFSGG------LGAYDVDDLLTEEFGVYSELPTPEYITFVFGPGSTVEHGRTLTDALRQVVGKATS-------RQRAASSDDVSLDTSFPSMRPTVSP-------------RQLCTPREAFFRPSRPVAAGDAVGLASAETVCPYPPGIPALLPGEEITQEALDLLATVKGAGGFVSGCADTSLATIRVV 1689
            L Q   PL++AL   +  V++P F+PGHKMG GAP      +L G + ALRHDLPELPELDNLFAPEGAI DA+ LAAEAFGA ++W L NGSTCGV+A+++ACVQ W  +R++    + + +                             P    R  V+LPR+ H+SAVHALV++GA P ++ P     SG+ LG+S   +  A+  +   +AAV++VSPTY G   DV +I+  C   GVPL+VDEAHGAHL FLE  +     P   G              AL  GAD+VV S HKTLGSLTQSA+LH                PQ   A+S AL  VQSSSPSYLLL+SLDAARW +A  E  G+R L  A R+   VR EL +  V G+  ++L   EG  A     DP+RLTV   GG      L  ++VD+ L E  GVY+ELP  + ITF F  GS   H R L +ALR++ G A         R+ AA++  + L        P  +P             ++ CTPREAFFR  + V+A  AVG  SAE VCPYPPGIP L+PGE I  +AL  L  ++ AG  +SG +D  L TI V+
Sbjct:    2 LVQSRAPLIEALVMASAAVKAPFFFPGHKMGEGAPLVLRRDLLKGDMSALRHDLPELPELDNLFAPEGAIADAQRLAAEAFGAKRSWFLVNGSTCGVIAAVLACVQLWIGARIREAACLARVSEEDCGGXXXXXXASANVDHRLGVGGVGGEP----RPRVLLPRNVHRSAVHALVMAGAEPVWVVPEYDEASGLTLGLSASKVAQAIKANEGSLAAVMLVSPTYHGVISDVAAIARSCRDAGVPLIVDEAHGAHLHFLEPSE-----PPFNGRP------------ALSQGADIVVHSIHKTLGSLTQSAILHASETALTR-------TPQLGSALSEALGLVQSSSPSYLLLASLDAARWQMAAPEARGRRWLAHASRLASSVRNELRTRPVGGMYPLELVKREGVAA----VDPVRLTVMVRGGSAKETLLDGFEVDEALIER-GVYAELPELDSITFAFSAGSRRRHSRRLVNALREIGGDACMPSEAGDRRRTAAAAAALRLAALTEEPDPDQAPASSSLSGADLESGKRACTPREAFFRARKSVSAEAAVGEISAELVCPYPPGIPLLVPGERIGADALAELLALRDAGCTISGASDADLDTIWVL 580          
BLAST of mRNA_F-serratus_M_contig1197.1511.1 vs. uniprot
Match: A0A4D9D2J8_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D2J8_9STRA)

HSP 1 Score: 387 bits (995), Expect = 7.650e-124
Identity = 261/587 (44.46%), Postives = 334/587 (56.90%), Query Frame = 1
Query:    1 RTSPQAGLDQDSTPLVDALEETATKVRSPLFYPGHKMGSGAP----SRFVDIILGGKLEAL------RHDLPELPELDNLFAPEGAIRDAETLAAEAFGAA-KTWLLTNGSTCGVLASIIACVQWHNSRLQPVGAVVQSNRAPPPLLRRSVVILPRDAHKSAVHALVLSGATPCFLPPLRHPKSGIGLGISRVS-LKAALVEH--GEEVAAVLVVSPTYEGACFDVESISNICHATGVPLVVDEAHGAHLAFLEEEDGRSEFPKGEGGTVIHMCSVRGSFAALQCGADLVVQSAHKTLGSLTQSALLHLGHGEFVSGGPGSDSLPQERAVSSALATVQSSSPSYLLLSSLDAARWSLAGGEKEGKRRLQDAVRIVRRVREELSSVQGIDVVDLEGEEGREAGFVGTDPLRLTVSFSG-GLGAYDVDDLLTEEFGVYSELPTPEYITFVFGPGSTVEHGRTLTDALRQVV-----GKATSRQRAASSDDVSLDTSFPSM--RPTVSPRQLCTPREAFFRPSRPVAAGD--AVGLASAETVCPYPPGIPALLPGEEITQEALDLLATVKGAGGFVSGCADTSLATIRVV 1689
            R + + G DQ  +P+V+AL   A ++++P F+PGHKMG G P      F +         L      ++DLPE+PELDNLFAPEG IRDAETLAAE FG A +TW L NGST GVLA+++A V+ H    Q   A  +S R+      +S V+LPR+ HKSA++ L+L+GA P FL P+  P   I  G+   S L+ AL EH  G EVAAVL+VSPTY GA  D+E  + +C    VPL+VDEAHGAHLAFLE E         E G    + S R    AL  GADLVVQS HKTL +++Q A++H G G  V      DS   E  V SAL  VQSSSP+Y+LL+SLD ARW L      G+  L  A ++  + +  L       ++    +  +   FVG DPLRLTV   G G+  +D D++L EE GVY+ELP    +TF  GPGS  E    L  A + +      GK    +  A  +  S    FP    +   +    C PR+A+F  S  ++  D   VG ASAETVCPYPPGIP LLPGE IT E L  L  V   GG V+GC+D SL  IRV+
Sbjct:   46 RWAREHGADQSKSPIVEALSLAAARIKAPFFFPGHKMGRGLPVGLPGPFAETNTALNRTRLHRDAVWQYDLPEIPELDNLFAPEGPIRDAETLAAETFGGAQRTWFLVNGSTAGVLAALLALVRRHQQEGQQHPA--RSGRS-----IQSKVLLPRNVHKSAINGLILAGAVPVFLSPVYDPAWDICHGVPIESALQQALEEHASGSEVAAVLLVSPTYHGAVMDIEQAALLCAKFKVPLIVDEAHGAHLAFLEVEIN-------EPGNAGPLAS-RAMTGALAQGADLVVQSTHKTLTAVSQCAMMHAGKGPLV------DSAMLE-FVGSALQLVQSSSPNYVLLASLDGARWQLGSPLGGGRTALHRAQKLAAKAKRLLLEETPFPILK-PPDRPKGGAFVGLDPLRLTVGTMGTGMSGFDADEVLIEEHGVYAELPASRTLTFAVGPGSEEEDVDCLVAAFKALATLVDKGKRDRSRDMAGEEASSFMADFPPFDGKQAAAGSLKCGPRDAYFTASEVLSTNDERVVGRASAETVCPYPPGIPVLLPGEIITVEVLRFLKGVLSTGGSVTGCSDPSLGKIRVL 609          
BLAST of mRNA_F-serratus_M_contig1197.1511.1 vs. uniprot
Match: A0A8J5XIB1_DIALT (OKR_DC_1 domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XIB1_DIALT)

HSP 1 Score: 363 bits (931), Expect = 2.300e-115
Identity = 249/574 (43.38%), Postives = 316/574 (55.05%), Query Frame = 1
Query:    4 TSPQAGLDQDSTPLVDALEETATKVRSPLFYPGHKMGSGAPSRFVDIILGGKLEALRHDLPELPELDNLFAPEGAIRDAETLAAEAFGAAKTWLLTNGSTCGVLASIIACVQWHNSRLQPVGAVVQSNRAPPPLLRRSVVILPRDAHKSAVHALVLSGATPCFLPPLRHPKSGIGLGIS-RVSLKAALVEHGEEVAAVLVVSPTYEGACFDVESISNICHATGVPLVVDEAHGAHLAFLEEEDGRSEFPKGEGGTVIHMCSVRGSFAALQCGADLVVQSAHKTLGSLTQSALLHLGHGEFVSGGPGS------DSLPQERAVSSALATVQSSSPSYLLLSSLDAARWSLAGGEKEGKRRLQDAVRIVRRVREELSSVQGIDVVDLEGEEGREAGFVGTDPLRLTVSFSGGLGAYDVDDLLTEEFGVYSELPTPEYITFVFGPGSTVEHGRTLTDALR--QVVGKATSRQRAASS-DDVSLDTSFPSMRPTVSPRQLCTPREAFFRPSRPVAAGDAVGLASAETVCPYPPGIPALLPGEEITQEALDLLATVKGAGGFVSGCADTSLATIRVVGE 1695
            +S  + LDQ  TP VDAL      V +P F PGHK+G G P     I+      A  +DLPEL ELDNLFAP G + +A+ LAAEAFGA +TW L NGS+ GV+A+I+ CV     RL P GA                V+LPR+AH+SAVHALV SGA P +L P    ++GI LG+    +L AAL EHG   A VL+VSP+YEGA  DV + + +C   GVPLVVDEAHGAHL+           P+G                AL CGA LVV S HKTLG+L+Q+A+LH  H    +G  G+       +L  + AVS AL +V SSSPS LLL+SLDAAR  +AG    G R L+ AVR+    R   +  + +    L        G   TDPLRLTV  +   G Y ++  L E +GVY+EL + +++TFV GPG+   H R L  ALR  Q    A +R+ A S  D   L              QL TPR+AF+  S  V   DA+G ASAE V  YPPG+P L PGE +  EA+ LL  V+  GG +   AD  L T+  + E
Sbjct:    8 SSAPSALDQGRTPYVDALRSARAHVAAPFFLPGHKLGEGLPDAAAPILSC----AAPYDLPELGELDNLFAPVGPLDEAQRLAAEAFGARRTWFLANGSSAGVIAAIVGCV-----RLAPPGA--------------RAVLLPRNAHRSAVHALVHSGAQPVWLVPEIDERTGIALGVDVHTTLHAALAEHGAGAACVLLVSPSYEGAVSDVRAAAALCAEAGVPLVVDEAHGAHLSLAPG------LPEG----------------ALACGATLVVHSTHKTLGALSQAAMLHAAHTPRPAGAIGAVYAAAARALALDAAVSGALESVCSSSPSSLLLASLDAARHQIAGAGARGPRELRRAVRLAAAARRAFAR-EPLARPRLVALPAPARGVAATDPLRLTVDAASLGGGYALEAWLIENWGVYAELASVDHLTFVLGPGTRGAHVRLLLAALRGAQACEPARAREAARSRLDRTRLGAVL------AGSTQLSTPRDAFYAQSEAVPIEDAIGRASAELVYSYPPGVPILCPGECVRAEAVALLREVRELGGTIVA-ADGELHTLLCLAE 528          
BLAST of mRNA_F-serratus_M_contig1197.1511.1 vs. uniprot
Match: A0A8J6SYK7_9CYAN (Aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme n=4 Tax=Cyanobacteria TaxID=1117 RepID=A0A8J6SYK7_9CYAN)

HSP 1 Score: 358 bits (918), Expect = 1.000e-113
Identity = 237/572 (41.43%), Postives = 322/572 (56.29%), Query Frame = 1
Query:   22 LDQDSTPLVDALEETATKVRSPLFYPGHKMGSGAPSRFVDIILGGKLEALRHDLPELPELDNLFAPEGAIRDAETLAAEAFGAAKTWLLTNGSTCGVLASIIACVQWHNSRLQPVGAVVQSNRAPPPLLRRSVVILPRDAHKSAVHALVLSGATPCFLPPLRHPKSGIGLGISRVSLKAALVEHGEEVAAVLVVSPTYEGACFDVESISNICHATGVPLVVDEAHGAHLAFLEEEDGRSEFPKGEGGTVIHMCSVRGSFAALQCGADLVVQSAHKTLGSLTQSALLHLGHGEFVSGGPGSDSLPQERAVSSALATVQSSSPSYLLLSSLDAARWSLAGGEKEGKRRLQDAVRIVRRVREELSSVQGIDVVDLEGEEGREAGFVGTDPLRLTVSFSG-GLGAYDVDDLLTEEFGVYSELPTPEYITFVFGPGSTVEHGRTLTDALRQVVGK-----ATSRQRAASSDDVSLDTSFPSMRPT----------VSPRQLCTPREAFFRPSRPVAAGDAVGLASAETVCPYPPGIPALLPGEEITQEALDLLATVKGAGGFVSGCADTSLATIRVV 1689
            LDQ + PL++AL   A +  +P + PGHK G G      D++     +A   DLPELP+LDNLFAPEG IR A+ LAAEAFGA +TW L NGSTCG+ A+I+A              V  S            ++LPR+ H+SA+ ALVLSGA P F+ P   P+ GI   I+  S+   L +H + V AVLVV PTY G C D+ +I+   H  G+PL+VDEAHGAH  F        + P                 +AL  GADLVVQS HK LG++TQ+A+LH+  G  V G    D L Q       L  VQS+SPSYLLL+SLDAAR  +A    +GK+ +   + +  + R +LS + G+ V+  E   G   GF   DP RLTV+ +G GL  +  D++L ++ GV +ELP+ +++TF+   G+T+     LT+A   +  +     A   +RA    +  +D SF S  PT           SP+   +PR+AFF P+  +A    +G  SAE VCPYPPGIP LLPGEEIT+ A+  L  V  AGG ++GCAD +L T++VV
Sbjct:    2 LDQTAMPLLEALRVQAHRAHAPFYTPGHKRGQGIAQPLADLLGTAVFQA---DLPELPDLDNLFAPEGVIRQAQELAAEAFGADRTWFLANGSTCGLEAAILA--------------VCNSGEK---------IVLPRNVHRSAIAALVLSGAIPIFVEPDYDPQLGIAHSITPDSVAHTLKQHSD-VKAVLVVYPTYYGVCGDIWAIAQRVHQHGIPLLVDEAHGAHFGF------HPDLP----------------ISALAVGADLVVQSTHKLLGAMTQAAMLHV-QGTRVDG----DRLSQT------LQLVQSTSPSYLLLASLDAARQQMA---TQGKQLMTQTLALAHQARTQLSQISGLSVLGAESA-GLTPGFAALDPTRLTVTTTGLGLTGFAADEILHQQLGVTAELPSLQHLTFIISLGNTLSDIEQLTNAFNHLSSQHPSPSAQPLERALKPIE-KVDFSFAS--PTKNQPLKQSLIASPQSPFSPRQAFFAPTETLAIAHTIGYISAEIVCPYPPGIPVLLPGEEITEGAIAYLQQVIAAGGVITGCADPNLDTLKVV 506          
BLAST of mRNA_F-serratus_M_contig1197.1511.1 vs. uniprot
Match: UPI0019A610AC (Aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme n=3 Tax=Cyanobacteria TaxID=1117 RepID=UPI0019A610AC)

HSP 1 Score: 354 bits (908), Expect = 2.100e-112
Identity = 232/559 (41.50%), Postives = 317/559 (56.71%), Query Frame = 1
Query:   25 DQDSTPLVDALEETATKVRSPLFYPGHKMGSGAPSRFVDIILGGKLEALRHDLPELPELDNLFAPEGAIRDAETLAAEAFGAAKTWLLTNGSTCGVLASIIACVQWHNSRLQPVGAVVQSNRAPPPLLRRSVVILPRDAHKSAVHALVLSGATPCFLPPLRHPKSGIGLGISRVSLKAALVEHGEEVAAVLVVSPTYEGACFDVESISNICHATGVPLVVDEAHGAHLAFLEEEDGRSEFPKGEGGTVIHMCSVRGSFAALQCGADLVVQSAHKTLGSLTQSALLHLGHGEFVSGGPGSDSLPQERAVSSALATVQSSSPSYLLLSSLDAARWSLAGGEKEGKRRLQDAVRIVRRVREELSSVQGIDVVDLEGEEGREAGFVGTDPLRLTVSFSG-GLGAYDVDDLLTEEFGVYSELPTPEYITFVFGPGSTVEHGRTLTDALRQVVGKATSRQRAASSDDVSLDTSFPSMRPTVSPRQLC---TPREAFFRPSRPVAAGDAVGLASAETVCPYPPGIPALLPGEEITQEALDLLATVKGAGGFVSGCADTSLATIRVV 1689
            DQ  TPL+DAL   A + R+    PGHK G G+P +F   +    L+A   DLPELPELDNLFAPEG I  A+ LAAEAF A  T+ L NGSTCG+ A+++A  Q    RL                      ILPR+AH SA+ AL+LSGATP ++ P+  P  GI   ++  +++AA ++   +  AVL+VSPTY G C D+ESI+ I HA  +PL+VDEAHGAH +F        + P                 +ALQ GADL VQS HKTL +LTQ+A+LH      V G    + + ++R +  AL  VQS+SP+YLLL+SLDAAR  +A    +GK  L + + +  RVR ++SS+  I +  L  E     GF   DP RLT+  SG G   +  D++L + FGV +ELP    +TF+   G+ +E    L  A +++   +       +S  +  D   P +  +  P ++    +PR AFF PS+ +    A+   SAE VCPYPPGIP LLPGE +T EA+D L  +  AGG ++GCAD +L TIRVV
Sbjct:    3 DQAQTPLLDALNAAALRDRAVFHTPGHKQGQGSPHKFSQRVGFAMLQA---DLPELPELDNLFAPEGVIEAAQRLAAEAFRAEATYFLANGSTCGIEAAVLATCQ-PGDRL----------------------ILPRNAHHSAIAALILSGATPGWIEPVADPAWGIAHAVTPAAVQAA-IDRNPDAKAVLIVSPTYYGVCADLESIARIAHAHNLPLLVDEAHGAHFSF------HPDLP----------------MSALQAGADLAVQSTHKTLSALTQAAMLH------VQG----NRIDRDR-LRRALQLVQSTSPNYLLLASLDAARQQMA---TQGKALLSETIALAERVRSQISSIPDIRL--LAPESVARLGFPALDPTRLTIEVSGLGFSGFAADEILHQAFGVTAELPGMTTLTFILTFGNLIEDADRLVHAFQRL---SHDYSMPPASPLLLPDAPLPMLDASQFPEEIIAPMSPRAAFFAPSQTLPVAKAIDRVSAELVCPYPPGIPLLLPGEVVTLEAIDRLQQILKAGGMITGCADLTLKTIRVV 493          
BLAST of mRNA_F-serratus_M_contig1197.1511.1 vs. uniprot
Match: A0A2N6K627_FISMU (Arginine decarboxylase n=2 Tax=Hapalosiphonaceae TaxID=1892263 RepID=A0A2N6K627_FISMU)

HSP 1 Score: 353 bits (907), Expect = 3.670e-112
Identity = 226/566 (39.93%), Postives = 317/566 (56.01%), Query Frame = 1
Query:   22 LDQDSTPLVDALEETATKVRSPLFYPGHKMGSGAPSRFVDIILGGKLEALRHDLPELPELDNLFAPEGAIRDAETLAAEAFGAAKTWLLTNGSTCGVLASIIACVQWHNSRLQPVGAVVQSNRAPPPLLRRSVVILPRDAHKSAVHALVLSGATPCFLPPLRHPKSGIGLGISRVSLKAALVEHGEEVAAVLVVSPTYEGACFDVESISNICHATGVPLVVDEAHGAHLAFLEEEDGRSEFPKGEGGTVIHMCSVRGSFAALQCGADLVVQSAHKTLGSLTQSALLHLGHGEFVSGGPGSDSLPQERAVSSALATVQSSSPSYLLLSSLDAARWSLAGGEKEGKRRLQDAVRIVRRVREELSSVQGIDVVD--LEGEEGREAGFVGTDPLRLTVSFSG-GLGAYDVDDLLTEEFGVYSELPTPEYITFVFGPGSTVEHGRTLTDALRQVVGKATSRQRAAS---SDDVSLDTSFPSMRPTVSPRQLCTPREAFFRPSRPVAAGDAVGLASAETVCPYPPGIPALLPGEEITQEALDLLATVKGAGGFVSGCADTSLATIRVVGEAL 1701
            LDQ+ TPL+D L+  A +  +P + PGHK G G   +  D+   GK    R+DLPEL ELDNLFAP G I+ A+ LAAE FGAA+TW L NGSTCG+ A+I+A     +                        +ILPR+ H SA+  L+LSGA P F+ P   P   I   I+  ++ AAL +H  +  AV++V PTY G C DV++I+ I H   +PL+VDEAHGAH AF        + P                  ALQ GADL VQS HKTLG++TQ+++LH+  G+ ++         ++R ++ AL  VQS+SPSYLLL+SLDAAR  +A     GK+ +   +++ +  R  ++ + G+ ++   L+GE G   GF+  D  RLTV+ SG G+  +  +++L ++FGV +E  T +++TF+   G+T E    L  AL ++    TS     S         D  F      V      +PREAFF  +  +     +G   AETVCPYPPGIP L+PGE IT+ AL+ L  ++  GGF+SGCADTSL+TI VV   L
Sbjct:    5 LDQNQTPLLDTLKVCAERFHAPFYTPGHKRGVGISPKIADVF--GKT-VFRNDLPELTELDNLFAPAGVIQQAQELAAEVFGAAQTWFLVNGSTCGIEAAILATCNTGDK-----------------------IILPRNVHSSAIAGLILSGAIPIFVNPEYDPVLDIAHSITPNAVAAALFKH-PDAKAVIMVYPTYYGVCGDVQAIAQITHQYNIPLIVDEAHGAHFAF------HPQLPT----------------PALQAGADLSVQSIHKTLGAMTQASMLHI-QGKRIN---------RDR-LNKALQLVQSTSPSYLLLASLDAARQQMA---LYGKQLMSRTLQLAKEARTRITQISGLSILQSPLQGELGGSPGFISLDQARLTVTVSGLGITGFTAEEILDQQFGVTAEFATLQHLTFIISLGNTQEDIEHLVQALTKLTEMITSSPSLLSYKAEGQEIWDDVF-----NVGASVHISPREAFFAATETLPISKTIGRICAETVCPYPPGIPVLMPGEMITKPALEYLQKIQAMGGFISGCADTSLSTITVVKAKL 502          
BLAST of mRNA_F-serratus_M_contig1197.1511.1 vs. uniprot
Match: A0A8J7BKX1_9CYAN (Aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme n=1 Tax=Trichocoleus sp. FACHB-262 TaxID=2692869 RepID=A0A8J7BKX1_9CYAN)

HSP 1 Score: 353 bits (907), Expect = 5.780e-112
Identity = 226/557 (40.57%), Postives = 313/557 (56.19%), Query Frame = 1
Query:   28 QDSTPLVDALEETATKVRSPLFYPGHKMGSGAPSRFVDIILGGKLEALRHDLPELPELDNLFAPEGAIRDAETLAAEAFGAAKTWLLTNGSTCGVLASIIACVQWHNSRLQPVGAVVQSNRAPPPLLRRSVVILPRDAHKSAVHALVLSGATPCFLPPLRHPKSGIGLGISRVSLKAALVEHGEEVAAVLVVSPTYEGACFDVESISNICHATGVPLVVDEAHGAHLAFLEEEDGRSEFPKGEGGTVIHMCSVRGSFAALQCGADLVVQSAHKTLGSLTQSALLHLGHGEFVSGGPGSDSLPQERAVSSALATVQSSSPSYLLLSSLDAARWSLAGGEKEGKRRLQDAVRIVRRVREELSSVQGIDVVDLEGEEGREAGFVGTDPLRLTVSFSG-GLGAYDVDDLLTEEFGVYSELPTPEYITFVFGPGSTVEHGRTLTDALRQVVGKATSRQRAASSDDVSLDTSFPSMRPTVSPRQLCTPREAFFRPSRPVAAGDAVGLASAETVCPYPPGIPALLPGEEITQEALDLLATVKGAGGFVSGCADTSLATIRVVGE 1695
            Q  TPL+DAL   A +  +P + PGHK G G PS+  D++     E  R DLPEL ELDNLFAP+G I+ A+ LAA+AFGA +TW L NGST GV+A+I+A     +                        +ILPR+ H+SA+  L+LSGA P F+ P   P   +   I+  S+ AAL ++  +  AVL+V PTY G C DV++I+ + HA G+PL+VDEAHG H AF        E P                 AAL  GADL VQS HK L ++TQ+A+LH+  GE V              ++ AL  VQS+SPSYLLL+SLDAAR  +A    +G+  +   +++    R ++S + G+ V  L+ E+    GF   D  RLTV+ S  GL  ++ D++L EEFGV +ELP+ +++TF+   G+T    + L  AL+ +         +  S+ V  +   P       P  + +PR+A+F P+  VA   AV   SAE VCPYPPGIP L+PGE I  EA++ L  V  AGGF++GCAD SL T++VV E
Sbjct:   25 QHQTPLLDALRHCAQRPNTPFYAPGHKRGQGVPSQLSDLL---GTEVFRADLPELVELDNLFAPQGPIQAAQELAAQAFGAEQTWFLANGSTSGVIAAILATCNPGDR-----------------------IILPRNVHQSAISGLILSGAIPVFVEPEYDPVLDLVHSITPASVAAALTQY-PDAKAVLMVYPTYYGVCGDVQAIAQLAHAQGIPLLVDEAHGPHFAF------HPELPT----------------AALTAGADLAVQSIHKVLSAMTQAAMLHV-QGERV----------DRDRLTKALQLVQSTSPSYLLLTSLDAARQQMA---TQGQALMTQTLQLADLARTQISQIPGLQV--LQPEQAGSPGFATLDRTRLTVTVSDLGLTGFEADEILNEEFGVTAELPSLQHLTFIISLGNTEADIQQLVMALKSLTE---GHHGSPPSNLVGANGRLPL------PNVVLSPRDAWFAPTETVAIAQAVNRVSAELVCPYPPGIPVLVPGEAIAPEAINYLQQVLAAGGFITGCADASLQTLKVVQE 507          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1197.1511.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8F2_ECTSI5.770e-24966.67Decarboxylase n=1 Tax=Ectocarpus siliculosus TaxID... [more]
A0A6H5K8P0_9PHAE2.210e-17656.55ADC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
A0A835Z373_9STRA3.420e-14046.15Decarboxylase n=1 Tax=Tribonema minus TaxID=303371... [more]
A0A7S4BJJ9_CHRCT4.070e-13043.63Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A4D9D2J8_9STRA7.650e-12444.46Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A8J5XIB1_DIALT2.300e-11543.38OKR_DC_1 domain-containing protein n=1 Tax=Diacron... [more]
A0A8J6SYK7_9CYAN1.000e-11341.43Aminotransferase class I/II-fold pyridoxal phospha... [more]
UPI0019A610AC2.100e-11241.50Aminotransferase class I/II-fold pyridoxal phospha... [more]
A0A2N6K627_FISMU3.670e-11239.93Arginine decarboxylase n=2 Tax=Hapalosiphonaceae T... [more]
A0A8J7BKX1_9CYAN5.780e-11240.57Aminotransferase class I/II-fold pyridoxal phospha... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1197contigF-serratus_M_contig1197:220220..226278 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score663.7
Seed ortholog evalue7.3e-188
Seed eggNOG ortholog2880.D7G8F2
Hectar predicted targeting categoryother localisation
EggNOG free text desc.arginine decarboxylase activity
EggNOG OGs2QWPE@2759,COG1982@1
Ec32 ortholog descriptiondecarboxylase
Ec32 orthologEc-14_002820.1
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons14
Model size1803
Cds size1599
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1197.1511.1prot_F-serratus_M_contig1197.1511.1Fucus serratus malepolypeptideF-serratus_M_contig1197 220328..226182 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929096.7906635-UTR-F-serratus_M_contig1197:220219..2203271622929096.7906635-UTR-F-serratus_M_contig1197:220219..220327Fucus serratus maleUTRF-serratus_M_contig1197 220220..220327 +
1690962702.9784737-UTR-F-serratus_M_contig1197:220219..2203271690962702.9784737-UTR-F-serratus_M_contig1197:220219..220327Fucus serratus maleUTRF-serratus_M_contig1197 220220..220327 +
1622929097.0382073-UTR-F-serratus_M_contig1197:226182..2262781622929097.0382073-UTR-F-serratus_M_contig1197:226182..226278Fucus serratus maleUTRF-serratus_M_contig1197 226183..226278 +
1690962703.12464-UTR-F-serratus_M_contig1197:226182..2262781690962703.12464-UTR-F-serratus_M_contig1197:226182..226278Fucus serratus maleUTRF-serratus_M_contig1197 226183..226278 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929096.8094792-CDS-F-serratus_M_contig1197:220327..2203351622929096.8094792-CDS-F-serratus_M_contig1197:220327..220335Fucus serratus maleCDSF-serratus_M_contig1197 220328..220335 +
1690962702.9904544-CDS-F-serratus_M_contig1197:220327..2203351690962702.9904544-CDS-F-serratus_M_contig1197:220327..220335Fucus serratus maleCDSF-serratus_M_contig1197 220328..220335 +
1622929096.8244357-CDS-F-serratus_M_contig1197:220558..2206641622929096.8244357-CDS-F-serratus_M_contig1197:220558..220664Fucus serratus maleCDSF-serratus_M_contig1197 220559..220664 +
1690962703.000076-CDS-F-serratus_M_contig1197:220558..2206641690962703.000076-CDS-F-serratus_M_contig1197:220558..220664Fucus serratus maleCDSF-serratus_M_contig1197 220559..220664 +
1622929096.8423767-CDS-F-serratus_M_contig1197:221246..2213231622929096.8423767-CDS-F-serratus_M_contig1197:221246..221323Fucus serratus maleCDSF-serratus_M_contig1197 221247..221323 +
1690962703.0120225-CDS-F-serratus_M_contig1197:221246..2213231690962703.0120225-CDS-F-serratus_M_contig1197:221246..221323Fucus serratus maleCDSF-serratus_M_contig1197 221247..221323 +
1622929096.8677356-CDS-F-serratus_M_contig1197:221640..2217341622929096.8677356-CDS-F-serratus_M_contig1197:221640..221734Fucus serratus maleCDSF-serratus_M_contig1197 221641..221734 +
1690962703.0219984-CDS-F-serratus_M_contig1197:221640..2217341690962703.0219984-CDS-F-serratus_M_contig1197:221640..221734Fucus serratus maleCDSF-serratus_M_contig1197 221641..221734 +
1622929096.8823233-CDS-F-serratus_M_contig1197:221788..2219771622929096.8823233-CDS-F-serratus_M_contig1197:221788..221977Fucus serratus maleCDSF-serratus_M_contig1197 221789..221977 +
1690962703.0303843-CDS-F-serratus_M_contig1197:221788..2219771690962703.0303843-CDS-F-serratus_M_contig1197:221788..221977Fucus serratus maleCDSF-serratus_M_contig1197 221789..221977 +
1622929096.8946774-CDS-F-serratus_M_contig1197:222350..2225671622929096.8946774-CDS-F-serratus_M_contig1197:222350..222567Fucus serratus maleCDSF-serratus_M_contig1197 222351..222567 +
1690962703.0391035-CDS-F-serratus_M_contig1197:222350..2225671690962703.0391035-CDS-F-serratus_M_contig1197:222350..222567Fucus serratus maleCDSF-serratus_M_contig1197 222351..222567 +
1622929096.908366-CDS-F-serratus_M_contig1197:222945..2230711622929096.908366-CDS-F-serratus_M_contig1197:222945..223071Fucus serratus maleCDSF-serratus_M_contig1197 222946..223071 +
1690962703.0479097-CDS-F-serratus_M_contig1197:222945..2230711690962703.0479097-CDS-F-serratus_M_contig1197:222945..223071Fucus serratus maleCDSF-serratus_M_contig1197 222946..223071 +
1622929096.9247713-CDS-F-serratus_M_contig1197:223516..2235791622929096.9247713-CDS-F-serratus_M_contig1197:223516..223579Fucus serratus maleCDSF-serratus_M_contig1197 223517..223579 +
1690962703.0602143-CDS-F-serratus_M_contig1197:223516..2235791690962703.0602143-CDS-F-serratus_M_contig1197:223516..223579Fucus serratus maleCDSF-serratus_M_contig1197 223517..223579 +
1622929096.9416492-CDS-F-serratus_M_contig1197:224234..2243631622929096.9416492-CDS-F-serratus_M_contig1197:224234..224363Fucus serratus maleCDSF-serratus_M_contig1197 224235..224363 +
1690962703.0716345-CDS-F-serratus_M_contig1197:224234..2243631690962703.0716345-CDS-F-serratus_M_contig1197:224234..224363Fucus serratus maleCDSF-serratus_M_contig1197 224235..224363 +
1622929096.962216-CDS-F-serratus_M_contig1197:224518..2246501622929096.962216-CDS-F-serratus_M_contig1197:224518..224650Fucus serratus maleCDSF-serratus_M_contig1197 224519..224650 +
1690962703.0797079-CDS-F-serratus_M_contig1197:224518..2246501690962703.0797079-CDS-F-serratus_M_contig1197:224518..224650Fucus serratus maleCDSF-serratus_M_contig1197 224519..224650 +
1622929096.9750195-CDS-F-serratus_M_contig1197:224879..2249941622929096.9750195-CDS-F-serratus_M_contig1197:224879..224994Fucus serratus maleCDSF-serratus_M_contig1197 224880..224994 +
1690962703.0871196-CDS-F-serratus_M_contig1197:224879..2249941690962703.0871196-CDS-F-serratus_M_contig1197:224879..224994Fucus serratus maleCDSF-serratus_M_contig1197 224880..224994 +
1622929096.9936326-CDS-F-serratus_M_contig1197:225263..2253711622929096.9936326-CDS-F-serratus_M_contig1197:225263..225371Fucus serratus maleCDSF-serratus_M_contig1197 225264..225371 +
1690962703.0947962-CDS-F-serratus_M_contig1197:225263..2253711690962703.0947962-CDS-F-serratus_M_contig1197:225263..225371Fucus serratus maleCDSF-serratus_M_contig1197 225264..225371 +
1622929097.0085123-CDS-F-serratus_M_contig1197:225610..2256991622929097.0085123-CDS-F-serratus_M_contig1197:225610..225699Fucus serratus maleCDSF-serratus_M_contig1197 225611..225699 +
1690962703.1031034-CDS-F-serratus_M_contig1197:225610..2256991690962703.1031034-CDS-F-serratus_M_contig1197:225610..225699Fucus serratus maleCDSF-serratus_M_contig1197 225611..225699 +
1622929097.022792-CDS-F-serratus_M_contig1197:226036..2261821622929097.022792-CDS-F-serratus_M_contig1197:226036..226182Fucus serratus maleCDSF-serratus_M_contig1197 226037..226182 +
1690962703.1130786-CDS-F-serratus_M_contig1197:226036..2261821690962703.1130786-CDS-F-serratus_M_contig1197:226036..226182Fucus serratus maleCDSF-serratus_M_contig1197 226037..226182 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1197.1511.1

>prot_F-serratus_M_contig1197.1511.1 ID=prot_F-serratus_M_contig1197.1511.1|Name=mRNA_F-serratus_M_contig1197.1511.1|organism=Fucus serratus male|type=polypeptide|length=533bp
MGSGAPSRFVDIILGGKLEALRHDLPELPELDNLFAPEGAIRDAETLAAE
AFGAAKTWLLTNGSTCGVLASIIACVQWHNSRLQPVGAVVQSNRAPPPLL
RRSVVILPRDAHKSAVHALVLSGATPCFLPPLRHPKSGIGLGISRVSLKA
ALVEHGEEVAAVLVVSPTYEGACFDVESISNICHATGVPLVVDEAHGAHL
AFLEEEDGRSEFPKGEGGTVIHMCSVRGSFAALQCGADLVVQSAHKTLGS
LTQSALLHLGHGEFVSGGPGSDSLPQERAVSSALATVQSSSPSYLLLSSL
DAARWSLAGGEKEGKRRLQDAVRIVRRVREELSSVQGIDVVDLEGEEGRE
AGFVGTDPLRLTVSFSGGLGAYDVDDLLTEEFGVYSELPTPEYITFVFGP
GSTVEHGRTLTDALRQVVGKATSRQRAASSDDVSLDTSFPSMRPTVSPRQ
LCTPREAFFRPSRPVAAGDAVGLASAETVCPYPPGIPALLPGEEITQEAL
DLLATVKGAGGFVSGCADTSLATIRVVGEALC*
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mRNA from alignment at F-serratus_M_contig1197:220220..226278+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1197.1511.1 ID=mRNA_F-serratus_M_contig1197.1511.1|Name=mRNA_F-serratus_M_contig1197.1511.1|organism=Fucus serratus male|type=mRNA|length=6059bp|location=Sequence derived from alignment at F-serratus_M_contig1197:220220..226278+ (Fucus serratus male)
CGCACGAGCCCGCAAGCTGGGCTCGATCAGGACTCCACGCCGCTCGTGGA TGCCCTCGAGGAAACCGCGACGAAGGTGCGGTCTCCCCTCTTCTACCCTG GCCACAAGATGGGTAGGTAAGTGTGTGATGTGCGGTAAAAAGCATGGTGC AATGCGGAGACGCGAGGCGCGAAACGTGACAGAACCCATTTCTTTCTGGT AATAATATCGGTTTGTCGTTCCGGCTTTGAGTCTGTTTTTGGTTGTTGTT CTCACGGTGGGCAGGCTCTCGCAGTCGGCTCACTAGCATCGCTGCTGCCG TCCGTTCTCCCCGCCACGCGCAACTCGCCGCCGTGGCAGCGGCGCGCCGT CGAGATTTGTGGACATTATCCTCGGTGGAAAGCTGGAGGCTTTGCGGCAC GATCTTCCCGAGCTGCCCGAGCTGGACAACCTCTTCGCGCCAGAGGTAAC AGTGAAGGGCTCATCTGTTCCTAGCCGACGCGCGTGAGGAGGCACTTTAC CGGCAGCCTTGAGTGAACAACTCTTCAACTCGAACCAGATACGACGGCGC TCGCGAGAGGCTAGCTTACTTAGAAGTAGGATGCGTTCGAATGCTATATA CAAGTGGTTGGCGATGGAGAGGTCTCTGCGCGAGGATCGGCCGCAGAACC CTCACCGTAGCTCTCCTTCGTCGAGCCTTACGACACACACACACACACAC ACATGCACACGAGTTCCGTCGCCTATTTGGCGCGGTGACATGTGCGCGGC AGCTTAACGGAGTCGGCTGAGGGTCCAGCTGGCAACATTGCCAACGATCG TGAGGAAAAGGAACGGGAGTTGGGTGCACTTTTAAAGGGCTTGCATTCCA TTCCAAATAATATCTACTTTCATAATAAATTGCGAACGGCACTATCCTAA ACATGCCCGAAATTGTCTAGAGCTGTAGTATGATGTAAACTGCATGCACC CCCCCCTTATCCCTGCTAATATCTAATATCGTGTGAAAAGTATTAGAAAA AGAGTGGACGGTTTGTGGCTGTTTCAGGGAGCCATCCGGGATGCAGAAAC GCTGGCGGCTGAAGCTTTCGGTGCTGCCAAGACGTGGTTGCTCACAAATG GGAGGTAATGCGTGTGTTCGTTTGCGGTACAGTAACTGCAAAGCTGTCGC CACGGGGTTAACGCACGCAGATAGTTAGTCGCGCTATCTCGCCTCCAAAA AGCTCAGGAGGAAACTAGGTTCGTGGCGTTCATACCGCTTTAGGTGGCCT TTCTCTTGCGGGATCGCGAGATTTAGTTCCAAGAGCGGCCAACCAACGCC CCCCCCCCCCTTCCCCCCGGCTGAAGCTCATGGGAGCGAACAGCGACAGC CTCTTTTTTAATATACTGTACATGACATCTCTCTTCTCTTTTATATGTAC TGTGCATGCCACACGAGGAAGCACTTGCGGGGTACTCGCGTCGATCATCG CCTGCGTTCAGTGGCACAATTCTCGCCTACAACCTGTCGGAGCGGTCGTT CAGAGCAACAGAGCGGTCGATCCGAGGGACTTGAGGACAGGAGCAGGGGC GTTGACGCAACCGGTGCAGCCGCCGCCGCTCCTCCGACGAAGCGTGGTGA TCCTTCCGCGAGACGCGCACAAGTCGGCGGTGCACGCTCTTGTCCTTAGC GGGGCGACACCGTGTTTTTTGCCCCCGCTGCGGCATCCCAAATCGGGTAT TGGTCTCGGAATCAGCCGGGTCTCGTTGAAGGCGGCGCTCGTGGAGCATG GAGAGGAGGTGCGCGTCTCAGGGATGGGCTCCGGGGGACGGTGGGAAGGA GGTAAAACGTCCCAGATTCCCGCCGGCTCTGGGAGTCAAGGACGAAAAAA AACGTTGGAGAGAAATCCCTACGATCGCGACAGAGCCTATTGTCCCTTTT CGAACTTGGGCGCAAAGTTTTGTCTACGGTTTTGTATAAAACAAACACAC CGAGTACTGCGAGGGATGATAGAGACCGGAAAAATATGTTTTTTGAGGCA CGGAGCCTCGGCGCCGCAAGCCACGGCTCTTTCGTAAGCTGTTACGAGTT ATACTACAGAGAAAAAAGTCTCGTTCCTGCGGGATAGCGTGAGTCGACGC CCCATGAAAACAAAACAAAACAAATCTACAGGTTGCCGCGGTGTTGGTGG TGTCGCCGACGTACGAGGGCGCCTGCTTTGACGTGGAGTCGATCTCGAAC ATTTGCCACGCGACCGGCGTTCCTCTCGTGGTGGACGAGGCCCACGGTGC GCACCTTGCCTTCCTGGAGGAGGAGGACGGACGGAGCGAGTTTCCGAAGG GTGAGGGGGGCACAGTAATCCACATGTGTTCCGTGCGTGGTTCATTCGGT ATCAATTCGCGGCTCCTGGCTGGCCTTGACCTGAAGCGTTTTTTGCATTT TTTTTTCGGATTGTGTGTTTACCGTGGGGACTGAGCCGAACGGTTAACAC CTTCGTCCGTTTCTCCAACACGTCAGGGGAGAGACGAAAATCGTTCCTTT CAGAAGCGGCAGGTCAGTACAGCGGTCTTGTAATGGTGTGCAGCCGCCAC CCAGATACCGTCCGTTCCTGTGCATCGTTCGCACTTGGGGCACGCCGCTT AGGAACGCAACGCATCCTGTCACGGCTCTTCCGGCCTAGCTCTCGTCGCC GATCCCGATCCCGATGAGCTTATGTTGTTTCCTCGTCCGCCGTTTGCGTC CCGTTCGAACCTCGCTGCCGTAACAGCGGCGCTGCAGTGCGGTGCAGACC TGGTGGTGCAGAGCGCTCACAAGACTCTGGGCTCGTTGACGCAATCTGCG TTGCTGCACCTCGGACACGGCGAGTTCGTGTCGGGAGGTCCGGGGTCGGA CTGTTCCGCGTCCCCAAACACGACCATAACATCCTCTCGGTCTGGCAGTC ATTTTGTCATAGACAGCAGTACAATGTACCGTTGCGGCACAGTATTCATT CTAGTTTTTTAATACTGTTAAATAGTATGGCACACTGACGAGCCTCGTGG GTAATACTGCTGTACACCGCATGTACGTGCTGTAATAATATTAGTCATAT GTACCTATTAGACAGAAGTTATTAAAATAATGGACTTTATAATGTGTATC ATATGTACCTATACACTAAACAGAATGTATCAGATAGTGTTTACAGAATA CGCTTTGGGGGGGGTTGCTCCTTTCAATGTTAATCTGCACTCTTTTTGTT TTTGTTTTTGGAGACGAAAAAAAACAACAACAACAACAACAAAAAGCATG GTCCACACCGGCACAAAAACCCTAACGTCCACCCCCCACCCTAGGAGCCC TGCCCCAGGAGAGAGCCGTGTCGTCCGCGCTTGCGACGGTCCAGAGCTCC AGCCCGAGCTGTGAGTGGCTTGTCTTCGCGTCCACCGTGATCCTTGTAGC GTCCCTCTCTTGAATTGGAAATATACTCGCGGCGGGGGGGGAGGTAGCGG GTAGCGGGCTGGTGGGGAACACGACGGCCTAGGCAGCAAGATGCGGCCGA TTCAATAACAATGCGATCATGCCAAGATTTTAAAAAAGCGTGTGATTCTG CGTGGACCATACAAATGTGATGTAACTTCCGTCTGCGAGCTCGTCGAGCA GCGCGACCGAGGACTTTTTCTGACGTCGTGAAGTGGCCTGGCGCTTCCCC CAACGCTTTCCGGGGTCAGGTCTAGTCCTTAGGTCCATTCCATAGACGAC AGGCAGACGGTGATAGTATGCAAAGGGTAGGCCGGGATGGGGGTAATCCT CTTTGCCCGGGATAGTCATCCATCAATAGCAGCGATCCTCGCGTGCGCAG GCAGGACTCTTGCGTGCTGCTGCTTCTCGTGCTGCAGCGTCGCTCGAATA CCCGTCAATGCGCCATACGCCCTCCAACTACAGCATGCTTCCCGCGCTCC ACATCTTGACCGTCGCAAAGAGCGCCGCGCTCGTCTCGCCTCTCGTTTAC ACGTACGCATTCGATTCGCGTTTAGCTGCACACATCTATCCTACGTTTGG CGTATGTTCCGGCAGACCTGCTCCTTTCGTCGCTGGATGCGGCGCGTTGG AGTCTCGCCGGCGGGGAAAAAGAAGGCAAGCGTCGCCTCCAAGATGCCGT GCGCATCGTGCGCCGTGTGCGGGAGGAACTGTCGAGCGTGCAAGGTGCGA CGACGCTTTCTTTGACCTGGGGGGAAAAGGGGGAGGAAGGTCACGACGTA TTTTTACGTCCCGCGTTTCGTCTCTCGGTAGACAGTGTCAGGTTTTATCG TGTGCGCCTTACACGATGGAAACCCTTGTCGCCGCTTCTCTTGGTGCAGG CATCGATGTGGTCGACCTCGAAGGGGAAGAAGGACGGGAGGCGGGGTTCG TGGGAACGGATCCCCTTCGCCTCACGGTGTCCTTCAGTGGAGGCCTCGGG GCATACGACGTCGACGACTTGCTCACAGAGGGTAAGAGCGCGGTGGAGCA CCAAGGACAGCGCGAGCGCGCATCTCTTGTGAACCATCCCGCCGTCGTTC GGTGTGCGATTCCGTTTGACTTGGCTGTTTTCTTTTTATTTGGCTGTTTT CAAGGCGCGAGGGAGGAGGGGGGGGGGGGGGTTATCGAGATGTGTGTTTT CCATTTTTGATTGAACTCCTATCGCCCTGGCCGCAACTATGGCGCTCGCT ATCATCTCAGAGTTTGGCGTGTACTCGGAGCTCCCGACCCCCGAGTACAT CACGTTCGTCTTCGGTCCGGGCTCTACCGTGGAGCACGGGCGGACGCTGA CAGACGCCTTGCGGCAGGTCGTGGGGTGAGGGTTCCTGGCACCTTTCTGA ACGTTGAATCCGATACTCGCTGTTCCCTGTTAGTTGACGGCTAAACCATT CGACTACTGAGTCACGTGACTGACTCAGGAGTCCAATGGTTTAGCCGTCA ATCTTTTGTTTTCACGCTTCCCCCTCGCAAGATGGCGGAAAACCGCACTC TCCCGTGTAGAGCTGTCTCGTTTTTCGTGTTTATTCGTTGTGCGGTTCCC ACCAGTACCCCAACGACCCCCCCCTACGTACGCAATACTCCCAGTAAAGC GACATCTCGTCAAAGGGCAGCATCTTCAGATGACGTATCGCTTGATACAA GCTTCCCCTCGATGCGTCCGACCGTCTCTCCCCGCCAGCTGTGCACTCCT CGGTACGTTATGAAGAGGCCGCCGCGCTCCACGCATCAACCTCTGCTTGG TATTATTAATTCCCTCCCCCCCTGGTATTATTAAATAGCACACCGCCCCT CCCTCCCAAATAAAAGAAAGAGAGAGATCATTCTCAATCATGTGCGCGTC GTACTTGCTTCCCCTCACTTTCTTCCTGGCCGTTTACCCGTTTATGAGGT AAAACTCTTTCTAGCGCAACGCCCCCCTCTCTTTTTGACAGGGAGGCGTT CTTTCGCCCGTCCAGGCCCGTCGCCGCGGGCGACGCCGTCGGACTAGCCA GCGCAGAGACGGTGTGCCCTTATCCCCCAGGTGAGAACATATAATGCCTT GTACGTAGGTAATACAGAGAGACAGGTAAACGTGCGGCGGGGGTGACGCG CTCCACCTCCGTTATTTGCGCTGGCATGGCACCGAGAGCCTGCGACGCTC ACATTTTGCATGATTCGGCGAAGTGAATCACCCTcCCCCCAAAAAAATCG ACGAGACGGCGCTGCTCCCTGAGCGGGAACGGTTTTTGGTACGTAACAGT AGTGTGTATGTAAGTGTGTGTGTGTGTGATTGAAAGCCGCTTCTTGTCCT CCGGCGTAAGAAGAGCTCCTAAAAGTAACGTTACCCACTACACCCTCGCT TGTAACCGTAACCGTAGGCATCCCAGCACTGTTGCCAGGCGAGGAGATAA CTCAGGAGGCTTTGGATCTTCTGGCGACCGTCAAGGGCGCGGGTGGCTTC GTTTCAGGGTGCGCCGATACCTCGTTGGCCACAATAAGAGTCGTGGGCGA AGCGCTTTGTTAGTTCCGCTGGCTGGTTTTTTGTGTGCTCTGCTGTAGCT GGGTCGCTAGCTCTAGTCTTACAGCCTACAGCGCAGGTGCCACTGCTCTC ACGCGCGCC
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Coding sequence (CDS) from alignment at F-serratus_M_contig1197:220220..226278+

>mRNA_F-serratus_M_contig1197.1511.1 ID=mRNA_F-serratus_M_contig1197.1511.1|Name=mRNA_F-serratus_M_contig1197.1511.1|organism=Fucus serratus male|type=CDS|length=3198bp|location=Sequence derived from alignment at F-serratus_M_contig1197:220220..226278+ (Fucus serratus male)
ATGGGTAGATGGGTAGCGGCGCGCCGTCGAGATTTGTGGACATTATCCTC
GGTGGAAAGCTGGAGGCTTTGCGGCACGATCTTCCCGAGCTGCCCGAGCT
GGACAACCTCTTCGCGCCAGAGCGGCGCGCCGTCGAGATTTGTGGACATT
ATCCTCGGTGGAAAGCTGGAGGCTTTGCGGCACGATCTTCCCGAGCTGCC
CGAGCTGGACAACCTCTTCGCGCCAGAGGGAGCCATCCGGGATGCAGAAA
CGCTGGCGGCTGAAGCTTTCGGTGCTGCCAAGACGTGGTTGCTCACAAAT
GGGAGGGAGCCATCCGGGATGCAGAAACGCTGGCGGCTGAAGCTTTCGGT
GCTGCCAAGACGTGGTTGCTCACAAATGGGAGCACTTGCGGGGTACTCGC
GTCGATCATCGCCTGCGTTCAGTGGCACAATTCTCGCCTACAACCTGTCG
GAGCGGTCGTTCAGAGCAACAGAGCGCACTTGCGGGGTACTCGCGTCGAT
CATCGCCTGCGTTCAGTGGCACAATTCTCGCCTACAACCTGTCGGAGCGG
TCGTTCAGAGCAACAGAGCGCCGCCGCCGCTCCTCCGACGAAGCGTGGTG
ATCCTTCCGCGAGACGCGCACAAGTCGGCGGTGCACGCTCTTGTCCTTAG
CGGGGCGACACCGTGTTTTTTGCCCCCGCTGCGGCATCCCAAATCGGGTA
TTGGTCTCGGAATCAGCCGGGTCTCGTTGAAGGCGGCGCTCGTGGAGCAT
GGAGAGGAGCCGCCGCCGCTCCTCCGACGAAGCGTGGTGATCCTTCCGCG
AGACGCGCACAAGTCGGCGGTGCACGCTCTTGTCCTTAGCGGGGCGACAC
CGTGTTTTTTGCCCCCGCTGCGGCATCCCAAATCGGGTATTGGTCTCGGA
ATCAGCCGGGTCTCGTTGAAGGCGGCGCTCGTGGAGCATGGAGAGGAGGT
TGCCGCGGTGTTGGTGGTGTCGCCGACGTACGAGGGCGCCTGCTTTGACG
TGGAGTCGATCTCGAACATTTGCCACGCGACCGGCGTTCCTCTCGTGGTG
GACGAGGCCCACGGTGCGCACCTTGCCTTCCTGGAGGAGGAGGACGGACG
GAGCGAGTTTCCGAAGGGTGAGGGGGGCACAGTAATCCACATGTGTTCCG
TGCGTGGTTCATTCGGTTGCCGCGGTGTTGGTGGTGTCGCCGACGTACGA
GGGCGCCTGCTTTGACGTGGAGTCGATCTCGAACATTTGCCACGCGACCG
GCGTTCCTCTCGTGGTGGACGAGGCCCACGGTGCGCACCTTGCCTTCCTG
GAGGAGGAGGACGGACGGAGCGAGTTTCCGAAGGGTGAGGGGGGCACAGT
AATCCACATGTGTTCCGTGCGTGGTTCATTCGCGGCGCTGCAGTGCGGTG
CAGACCTGGTGGTGCAGAGCGCTCACAAGACTCTGGGCTCGTTGACGCAA
TCTGCGTTGCTGCACCTCGGACACGGCGAGTTCGTGTCGGGAGGTCCGGG
GTCGGACTCGGCGCTGCAGTGCGGTGCAGACCTGGTGGTGCAGAGCGCTC
ACAAGACTCTGGGCTCGTTGACGCAATCTGCGTTGCTGCACCTCGGACAC
GGCGAGTTCGTGTCGGGAGGTCCGGGGTCGGACTCCCTGCCCCAGGAGAG
AGCCGTGTCGTCCGCGCTTGCGACGGTCCAGAGCTCCAGCCCGAGCTCCC
TGCCCCAGGAGAGAGCCGTGTCGTCCGCGCTTGCGACGGTCCAGAGCTCC
AGCCCGAGCTACCTGCTCCTTTCGTCGCTGGATGCGGCGCGTTGGAGTCT
CGCCGGCGGGGAAAAAGAAGGCAAGCGTCGCCTCCAAGATGCCGTGCGCA
TCGTGCGCCGTGTGCGGGAGGAACTGTCGAGCGTGCAAGACCTGCTCCTT
TCGTCGCTGGATGCGGCGCGTTGGAGTCTCGCCGGCGGGGAAAAAGAAGG
CAAGCGTCGCCTCCAAGATGCCGTGCGCATCGTGCGCCGTGTGCGGGAGG
AACTGTCGAGCGTGCAAGGCATCGATGTGGTCGACCTCGAAGGGGAAGAA
GGACGGGAGGCGGGGTTCGTGGGAACGGATCCCCTTCGCCTCACGGTGTC
CTTCAGTGGAGGCCTCGGGGCATACGACGTCGACGACTTGCTCACAGAGG
GCATCGATGTGGTCGACCTCGAAGGGGAAGAAGGACGGGAGGCGGGGTTC
GTGGGAACGGATCCCCTTCGCCTCACGGTGTCCTTCAGTGGAGGCCTCGG
GGCATACGACGTCGACGACTTGCTCACAGAGGAGTTTGGCGTGTACTCGG
AGCTCCCGACCCCCGAGTACATCACGTTCGTCTTCGGTCCGGGCTCTACC
GTGGAGCACGGGCGGACGCTGACAGACGCCTTGCGGCAGGTCGTGGGAGT
TTGGCGTGTACTCGGAGCTCCCGACCCCCGAGTACATCACGTTCGTCTTC
GGTCCGGGCTCTACCGTGGAGCACGGGCGGACGCTGACAGACGCCTTGCG
GCAGGTCGTGGGTAAAGCGACATCTCGTCAAAGGGCAGCATCTTCAGATG
ACGTATCGCTTGATACAAGCTTCCCCTCGATGCGTCCGACCGTCTCTCCC
CGCCAGCTGTGCACTCCTCGTAAAGCGACATCTCGTCAAAGGGCAGCATC
TTCAGATGACGTATCGCTTGATACAAGCTTCCCCTCGATGCGTCCGACCG
TCTCTCCCCGCCAGCTGTGCACTCCTCGGGAGGCGTTCTTTCGCCCGTCC
AGGCCCGTCGCCGCGGGCGACGCCGTCGGACTAGCCAGCGCAGAGACGGT
GTGCCCTTATCCCCCAGGGAGGCGTTCTTTCGCCCGTCCAGGCCCGTCGC
CGCGGGCGACGCCGTCGGACTAGCCAGCGCAGAGACGGTGTGCCCTTATC
CCCCAGGCATCCCAGCACTGTTGCCAGGCGAGGAGATAACTCAGGAGGCT
TTGGATCTTCTGGCGACCGTCAAGGGCGCGGGTGGCTTCGTTTCAGGGTG
CGCCGATACCTCGTTGGCCACAATAAGAGTCGTGGGCGAAGCGCTTTGTT
AGGCATCCCAGCACTGTTGCCAGGCGAGGAGATAACTCAGGAGGCTTTGG
ATCTTCTGGCGACCGTCAAGGGCGCGGGTGGCTTCGTTTCAGGGTGCGCC
GATACCTCGTTGGCCACAATAAGAGTCGTGGGCGAAGCGCTTTGTTAG
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