mRNA_F-serratus_M_contig1181.1450.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1181.1450.1 vs. uniprot
Match: D8LC29_ECTSI (tRNA-uridine aminocarboxypropyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC29_ECTSI) HSP 1 Score: 395 bits (1014), Expect = 4.670e-128 Identity = 197/305 (64.59%), Postives = 236/305 (77.38%), Query Frame = 3
Query: 81 RRDSLSSTMNDYLDNPPDCALWPETRQECKVCGKRGRFYCPDCLLFVGKPDEVEVPLEIQLPLKVDVVVTPDERRRSSGVQLAVVAPKSVRVVSFE-EAEDGLPD--YQPESDLVVFPSQRSVVWSDLSPGEIATVRRLVLVDSRWVNTRAVVTHPKLSGLRHVRISQPPGRSRYWRWHSAGDGHICTAEATYLVLKDFERASGRTTEGGRLEDLLFLFALMSSRIKDAYATDPNKRGKELPASEAAKQRRRMKTVRLNSLVKPKYRGLDDVREKQGEVEAVEEFFRRRRRGSVYGGAVSNEGSL 986
RR +S M +YL+ PPD LWP+ RQEC CGKR R YCPDCL+ VG PD VE P E++LPL+VDVVVT +ERRRSSGV +AV+AP+SVRVVSFE D L Y+PESD VVFPS SV WS+LS ++A VRR++L+DSRWVNT AVV HPKL GLRHVRI +PP S++WRWH+ G+GHICTAEATYLVLKDFE A+G T GGRLED+LFLFALM SRIK AY +DP+K GK P+SE AKQRRR++ V+L+ LVK KY+GLD +RE+ G+ A+EEFFRRRR SVY A + SL
Sbjct: 3 RRSRGASAMEEYLERPPDINLWPQGRQECHRCGKRVRLYCPDCLILVGTPDGVETPTELRLPLQVDVVVTAEERRRSSGVHVAVMAPQSVRVVSFEGSGGDDLSSCSYRPESDFVVFPSAASVCWSELSEEDLARVRRVILIDSRWVNTGAVVGHPKLKGLRHVRIREPPAVSQFWRWHTEGEGHICTAEATYLVLKDFEEATGLVTRGGRLEDILFLFALMGSRIKAAYESDPSKLGKSCPSSEEAKQRRRVRLVQLDRLVKAKYKGLDALRERDGDEAAIEEFFRRRRGESVYDAASTTSASL 307
BLAST of mRNA_F-serratus_M_contig1181.1450.1 vs. uniprot
Match: A0A6H5KIR2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIR2_9PHAE) HSP 1 Score: 184 bits (467), Expect = 8.360e-51 Identity = 92/145 (63.45%), Postives = 110/145 (75.86%), Query Frame = 3
Query: 81 RRDSLSSTMNDYLDNPPDCALWPETRQECKVCGKRGRFYCPDCLLFVGKPDEVEVPLEIQLPLKVDVVVTPDERRRSSGVQLAVVAPKSVRVVSFEEAED-GLPD--YQPESDLVVFPSQRSVVWSDLSPGEIATVRRLVLVDSR 506
RR +S M DYL+ PPD LWP+ RQEC CGKR R YCPDCLL VG PD VE P E++LPL+VDVVVT +ERRRSSGV +AV+AP+SVRVVSFE + D GL Y+PESD VVFPS SV WS+LS ++A RR++L+DSR
Sbjct: 3 RRSRGASAMEDYLERPPDINLWPKARQECHRCGKRVRLYCPDCLLLVGMPDGVETPTELRLPLQVDVVVTAEERRRSSGVHVAVMAPQSVRVVSFEGSGDNGLSSCSYRPESDFVVFPSASSVCWSELSEEDLARARRIILIDSR 147
BLAST of mRNA_F-serratus_M_contig1181.1450.1 vs. uniprot
Match: A0A484EFL7_BRELC (tRNA-uridine aminocarboxypropyltransferase n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EFL7_BRELC) HSP 1 Score: 155 bits (391), Expect = 5.630e-38 Identity = 90/242 (37.19%), Postives = 135/242 (55.79%), Query Frame = 3
Query: 144 WPETRQECKVCGKRGRFYCPDCLLFVGKPDEVEVPLEIQLPLKVDVVVTPDERRRSSGVQLAVVAPKSVRVVSF--EEAEDGLPDYQPESDLVVFPSQRSVVWSDLSPGEIATVRRLVLVDSRWVNTRAVVTHPKLSGLRHVRISQPPGRSRYWRWHSAGDGHICTAEATYLVLKDF---------ERASGRTTEGGRLEDLLFLFALMSSRIKDAY--ATDPNKRGKELPASEAAKQRRRM 830
WP R C C + +FYCP C + +G P V VP +++LPL+V V D+ ++S+ V+AP+ VR+V + E +D +P Y + ++V+PS +S V S E+ VR L+ +D W ++ HP L+ LRHVR+SQPP S +WR+H AG G + T EA L+L+++ E A G +E +L DLLF F L RI D + DP+++ P A K+RRR+
Sbjct: 10 WP--RVPCSSCQRSYKFYCPKCFIPLGVPKNVSVP-KLKLPLQVHVWFQ-DKIKKSTAPHAKVLAPQDVRIVPYPRNENDDAMPIYTQDRSILVYPSYKSEVLDQFSMEELRNVRTLIFIDCPWQKAPVIMNHPSLANLRHVRLSQPPKESNFWRYHKAGAGCVSTIEAIKLMLEEYTAVAKTANIETAVG--SENTQLSDLLFFFKLQFLRIVDHFNHEADPDRKP---PMDAAEKERRRL 242
BLAST of mRNA_F-serratus_M_contig1181.1450.1 vs. uniprot
Match: A0A067D5L9_SAPPC (tRNA-uridine aminocarboxypropyltransferase n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067D5L9_SAPPC) HSP 1 Score: 152 bits (383), Expect = 4.380e-37 Identity = 78/230 (33.91%), Postives = 132/230 (57.39%), Query Frame = 3
Query: 153 TRQECKVCGKRGRFYCPDCLLFVGKPDEVEVPLEIQLPLKVDVVVTPDERRRSSGVQLAVVAPKSVRVVSFEEAEDGLPDYQPESDLVVFPSQRSVVWSDLSPGEIATVRRLVLVDSRWVNTRAVVTHPKLSGLRHVRISQPPGRSRYWRWHSAGDGHICTAEATYLVLKDFERASGRT----TEGGRLEDLLFLFALMSSRIKDAYATDPNKRGKELPASEAAKQRRRM 830
TR+ C C K +FYC C L +G P +V VP I+LP+ +DV+ D+ ++S+ Q VVAP+ + ++ F + P Y P +VV+PS + V +L ++ + L+ +D W A++ LS LR V++++PP S++WR+HS+GDG + T EA YL+L+++ A T + ++L+ F L+ I + + +DPN++ P SEA K+R+R+
Sbjct: 8 TREVCPTCKKSSKFYCATCFLSLGAPSDVHVP-RIKLPVTIDVIFH-DKIKKSTAPQGKVVAPEDIHIIPFPYKDGASPVYDPAKAVVVYPSNDAFVLDELE--DLDQLETLIFIDCPWQKGPAILNDKSLSHLRTVKLAKPPLHSKFWRYHSSGDGCVSTIEAVYLMLEEYTAAMHARNLALTSTDDVSEILYYFNLVHDTILETHKSDPNRQLDRAPMSEAEKERQRL 233
BLAST of mRNA_F-serratus_M_contig1181.1450.1 vs. uniprot
Match: A0A1V9YI10_9STRA (tRNA-uridine aminocarboxypropyltransferase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YI10_9STRA) HSP 1 Score: 152 bits (383), Expect = 5.180e-37 Identity = 80/231 (34.63%), Postives = 135/231 (58.44%), Query Frame = 3
Query: 153 TRQECKVCGKRGRFYCPDCLLFVGKPDEVEVPLEIQLPLKVDVVVTPDERRRSSGVQLAVVAPKSVRVVSFEEAEDGLPDYQPESDLVVFPSQRSVVWSDLSPGEIATVRRLVLVDSRWVNTRAVVTHPKLSGLRHVRISQPPGRSRYWRWHSAGDGHICTAEATYLVLKDFERASGRTTEGGRLED----LLFLFALMSSRIKDAYATDPNKRGKELPASEAAKQRRRMK 833
+R C C K +FYC C + +G P+ V VP I+LP+KVD++ D+ ++S+ Q VVAP + ++ F AE P Y +VV+PS ++V DL +I + L+ +D W ++ HP ++ LR V++++PP S++WR+HS+G+G I T EA YL+L+++ A + + D LL+ F ++ I + + TDPN++ + P SEAAK+ +R++
Sbjct: 15 SRAVCPNCKKSNKFYCATCFVPIGAPNGVAVP-RIRLPVKVDILFH-DKIKKSTAPQGKVVAPDDIEIIQFPYAEGKAPAYDAAKAVVVYPSNDALVLDDLE--DIDQIETLIFIDCPWQKGPTILNHPSVAHLRAVKLAKPPLHSKFWRYHSSGEGCISTIEAVYLMLEEYLTALQKRNLTPSMTDPVGGLLYFFNIVHDVILETHKTDPNRQLERAPMSEAAKELQRLR 241
BLAST of mRNA_F-serratus_M_contig1181.1450.1 vs. uniprot
Match: K3WYM5_GLOUD (tRNA-uridine aminocarboxypropyltransferase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WYM5_GLOUD) HSP 1 Score: 148 bits (373), Expect = 1.440e-35 Identity = 79/237 (33.33%), Postives = 135/237 (56.96%), Query Frame = 3
Query: 153 TRQECKVCGKRGRFYCPDCLLFVGKPDEVEVPLEIQLPLKVDVVVTPDERRRSSGVQLAVVAPKSVRVVSFEEAEDG--LPDYQPESDLVVFPSQRSVVWSDLSPGEIATVRRLVLVDSRWVNTRAVVTHPKLSGLRHVRISQPPGRSRYWRWHSAGDGHICTAEATYLVLKDFE----RASGRTTEGG---RLEDLLFLFALMSSRIKDAYATDPNKRGKELPASEAAKQRRRMKT 836
TR C C + +FYCP+C + +GKP++V VP + LPL+V + D++++S+ V+AP+SV ++ + ++G L Y E +VV+P+ S +DL+P ++ V+ LV +D W A++ P L LR V++++PP S++WR+H AG G + T EA L+L+++ A G EG ++ DLLF F L+ +I + + DP ++ + E +R M+T
Sbjct: 16 TRVPCPSCNRSYKFYCPECCITIGKPEDVAVP-SLTLPLQVHIWFQ-DKKKKSTAPHAKVLAPQSVDIIQYPLDKEGETLAVYTREDTVVVYPTYESETLADLTPEDLQQVKTLVFIDCPWQKAPAILHDPALVNLRCVKLAKPPLESKFWRYHKAGKGCVSTIEAIQLMLEEYVDVMVNAKGTLREGSENTKMSDLLFFFELLYCQISERFEVDPGRKKRPPMDEEXXXXQRLMRT 250
BLAST of mRNA_F-serratus_M_contig1181.1450.1 vs. uniprot
Match: A0A1W0A5Q3_9STRA (tRNA-uridine aminocarboxypropyltransferase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A5Q3_9STRA) HSP 1 Score: 145 bits (366), Expect = 7.320e-35 Identity = 76/230 (33.04%), Postives = 132/230 (57.39%), Query Frame = 3
Query: 153 TRQECKVCGKRGRFYCPDCLLFVGKPDEVEVPLEIQLPLKVDVVVTPDERRRSSGVQLAVVAPKSVRVVSFEEAEDGLPDYQPESDLVVFPSQRSVVWSDLSPGEIATVRRLVLVDSRWVNTRAVVTHPKLSGLRHVRISQPPGRSRYWRWHSAGDGHICTAEATYLVLKDFERASGRT----TEGGRLEDLLFLFALMSSRIKDAYATDPNKRGKELPASEAAKQRRRM 830
TR C C K +FYC C + VG P+ VP I+LPLKVD++ D+ ++S+ Q V+AP+ + +V F + Y P +VV+PS ++V +L ++A++ L+ +D W A++ +S LR V++++PP S++WR+HS+G+G I T EA YL+L+++ A + + DLL+ F ++ I + + ++PN++ + P SE K R+R+
Sbjct: 5 TRAPCPECKKSSKFYCATCCVSVGVPENTTVPC-IRLPLKVDILFQ-DKLKKSTAPQGKVIAPQDIAIVPFPYVDGHTLAYDPSKCVVVYPSNDALVLEELD--DLASIDTLIFIDCPWQKGPAILNDSSISHLRSVKLAKPPLHSKFWRYHSSGEGCISTIEAVYLMLEEYSAACHARDIPLSSTDNVADLLYFFHMIHDVILETHKSNPNRQLERAPMSEEEKNRQRI 230
BLAST of mRNA_F-serratus_M_contig1181.1450.1 vs. uniprot
Match: W7TJ86_9STRA (tRNA-uridine aminocarboxypropyltransferase n=3 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJ86_9STRA) HSP 1 Score: 139 bits (351), Expect = 9.770e-33 Identity = 89/265 (33.58%), Postives = 146/265 (55.09%), Query Frame = 3
Query: 96 SSTMNDYLDNPPDCAL--WPETRQECKVCGKRGRFYCPDCLLFVGKPDEVEVPLEIQLPLKVDVVVTPDERRRSSGVQLAVVAPKSVRVVSFEEAEDGLPD-----YQPESDLVVFPSQRSVVWSDLSPGEIATVRRLVLVDSRWVNTRAVVTHPKLSGL-RHVRISQPPGRSRYWRWHSAGDGHICTAEATYLVLKDFE--------------RASGRTTEGG-RLEDLLFLFALMSSRIKDAYATDPNKRGKELPASEAAKQR 821
S+++ YL P A+ W + C RFYC C+ +VG P V+VP ++LPL+V++++ D R++S+ +Q+ VVA +SVRV ++ GL + ++ + LV+FPSQ +V + +S E+ ++R+V++DSRW NT V+ HP + L + V++ PP S WR+HS G+G + +AEA Y KD+E +SG+ +G LE+++ +F L + IK++Y K LP A K R
Sbjct: 29 SASLQAYLAAPLPYAIDDWVKAACPSHGCTAEKRFYCAKCVCWVGVPAGVQVP-RLRLPLEVNIIIA-DNRKKSTAIQVGVVATESVRV--WDTWTGGLEELAAEPWEVDETLVLFPSQDAVTLNAMSFEELTVIKRVVVLDSRWNNTTTVLDHPGVRRLTKRVKLKNPPQESLCWRYHSKGEGLLSSAEALYYFFKDYEWLTHRRVKAVHSVTESSGQNEDGEVMLEEIMHIFRLNINVIKESYNKGARK-NLPLPMEAAGKAR 288
BLAST of mRNA_F-serratus_M_contig1181.1450.1 vs. uniprot
Match: Q54C26_DICDI (tRNA-uridine aminocarboxypropyltransferase n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=Q54C26_DICDI) HSP 1 Score: 119 bits (297), Expect = 8.640e-26 Identity = 67/238 (28.15%), Postives = 121/238 (50.84%), Query Frame = 3
Query: 90 SLSSTMNDYLDNPPDCALWPE-------------TRQECKVCGKRGRFYCPDCLLFVGKPDEVEVPLEIQLPLKVDVVVTPDER-RRSSGVQLAVVAPKSVRVVSFEEAEDGLPDYQPESDLVVFPSQRSVVWSDLSPGEIATVRRLVLVDSRWVNTRAVVTHPKLSGLRHVRISQPPGRSRYWRWHSAGDGHICTAEATYLVLKDFERASGRTTEGGRLEDLLFLFALMSSRIKDAY 761
+L ST+ LDN D W +R C C K+ +++C DC L +G P+ +++LPL VDV+ P E +S+ + V+A + V+ + F E +PDY + ++++PS+ S D+ + + +++++ V+S+W N R ++ HPKL G++ V+I ++ +WR GD ++ T EA Y K+F + G ++LLF + + I+ Y
Sbjct: 65 NLKSTVG-VLDNVKDDQSWLSDLKLHTFDHMIDISRTICTKCEKKRKYFCYDCCLPLGDPENSP---KLKLPLNVDVIHHPTELISKSTAIHSKVIAYEDVKFIEFPEE---IPDYNLDETILLYPSEDSCFVKDI---DFSNIKKVLFVESQWHNARKILKHPKLQGIKCVKIDMQ--KTMFWRHQRHGDSYLATIEAIYYFFKEFHLSQNNNQYNGEYDNLLFYYTFFYNLIQTTY 290
BLAST of mRNA_F-serratus_M_contig1181.1450.1 vs. uniprot
Match: A0A0L0DRL4_THETB (tRNA-uridine aminocarboxypropyltransferase n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DRL4_THETB) HSP 1 Score: 103 bits (256), Expect = 1.500e-20 Identity = 63/206 (30.58%), Postives = 110/206 (53.40%), Query Frame = 3
Query: 156 RQECKVCGKRGRFYCPDCLLFVGKPDEVEVPLEIQLPLKVDVVVTPDER-RRSSGVQLAVVAPKSVRVVSFEEAEDGLPDYQPESDLVVFPSQRSVVWSDLSP-GEIATVRRLVLVDSRWVNTRAVVTHPKLSGLRHVRISQPPGRSRYWRWHSAGDG-HICTAEATYLVLKDFERASGRT-TEGGRLEDLLFLFALMSSRIKDAY 761
R C+ CG++ +++CP C +F+G + VP I LP+ + ++ P E+ +S+ V AV+AP + F E D +P + L+V+P + DL+ G++A R+V VD++W +RAV+ H L L VR++ + +WR+ D ++ T EA Y +++ RA+ + GR + L++LFA I+ Y
Sbjct: 46 RMACRGCGRKSKYFCPQCKVFMGDIIDGTVP-RIDLPIDLHIMHHPKEKLAKSTAVHAAVLAPNTTY---FHEFPD-IPRFDAGDTLLVYPDPAAPTLDDLAAAGKLANYTRVVFVDAQWRQSRAVMRHANLQDLPRVRMNSY--ETLFWRYQPGMDATYLATIEAIYYFYREYARAAADDGSYDGRYDGLMYLFAHQYELIQGVY 244 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1181.1450.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1181.1450.1 >prot_F-serratus_M_contig1181.1450.1 ID=prot_F-serratus_M_contig1181.1450.1|Name=mRNA_F-serratus_M_contig1181.1450.1|organism=Fucus serratus male|type=polypeptide|length=324bp MQDDLDIDRKEEGRRDSLSSTMNDYLDNPPDCALWPETRQECKVCGKRGRback to top mRNA from alignment at F-serratus_M_contig1181:122635..132292- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1181.1450.1 ID=mRNA_F-serratus_M_contig1181.1450.1|Name=mRNA_F-serratus_M_contig1181.1450.1|organism=Fucus serratus male|type=mRNA|length=9658bp|location=Sequence derived from alignment at F-serratus_M_contig1181:122635..132292- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1181:122635..132292- >mRNA_F-serratus_M_contig1181.1450.1 ID=mRNA_F-serratus_M_contig1181.1450.1|Name=mRNA_F-serratus_M_contig1181.1450.1|organism=Fucus serratus male|type=CDS|length=1944bp|location=Sequence derived from alignment at F-serratus_M_contig1181:122635..132292- (Fucus serratus male)back to top |