mRNA_F-serratus_M_contig117.1398.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig117.1398.1 vs. uniprot
Match: A0A6H5KEX8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KEX8_9PHAE) HSP 1 Score: 282 bits (722), Expect = 1.160e-91 Identity = 158/287 (55.05%), Postives = 191/287 (66.55%), Query Frame = 1
Query: 19 EVATLDCCTGTIMRIKGSISRLYLGVLEERLGIEEGGIPG-VCEQALLDTFQAFIKRRSQVSPCFGAGVMSSEEWWADVVRTAFLGAGVPEESL----EG----------------VFDEXXXXXXXXXFTRGPTWELVPGTMGVISDLRAWCQE-GGPLALGVTIRLTDKSNFDERLHSLLRNLGVYDLFDFVLTSRECGSQKPDPHIFREALKRAGTR---EADGVGVHIGDSFGKDVLGARGVGWDSFLVTQ-KGPSDDEKN--VRHVRVGELTDVPVALGIAR 795
+V LDC TGTIMRIKGS+ RLYLGVLE+RLG+ EGG+P V EQ LL++F+A +KRRS+ PCFG GVMSSE+WWA+VV F GAGV +E+L EG VFD+ FT WELVPG V+ DLRAW E GGP ALG SNFDERLH LL+NLGVY+ FDFVLTSRECGS+KP+PH+F EALKRAG+ + DG GV +GD+F DVLGAR VGWD+ L+T+ K P+ +E+ + RV +L VP ALG R
Sbjct: 38 DVVCLDC-TGTIMRIKGSMPRLYLGVLEDRLGVSEGGLPDKVSEQDLLNSFRASLKRRSKELPCFGTGVMSSEDWWAEVVMATFRGAGVSDETLGISQEGDRGGGXXXXXXXXXGRVFDDVFDRLFHDVFTSTTAWELVPGAEEVLEDLRAWVGEAGGPRALGAV------SNFDERLHPLLKNLGVYESFDFVLTSRECGSEKPEPHMFHEALKRAGSSGGGDGDGRGVIVGDTFRTDVLGARSVGWDAVLITRGKDPATEEEQDTTHYARVDDLRGVPAALGRGR 317
BLAST of mRNA_F-serratus_M_contig117.1398.1 vs. uniprot
Match: A0A8J5XU42_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XU42_DIALT) HSP 1 Score: 142 bits (357), Expect = 1.000e-36 Identity = 101/290 (34.83%), Postives = 132/290 (45.52%), Query Frame = 1
Query: 1 MSAARREVATLDCCTGTIMRIKGSISRLYLGVLEERLGIE-----------EGGIPGVCEQALLDTFQAFIKRRSQVSPCFGAGVMSSEEWWADVVRTAFLGAGVPEESLEGVFDEXXXXXXXXXFTRGPTWELVPGTMGVISDLRAWCQE--GGPLALGVTIRLTDKSNFDERLHSLLRNLGVYDLFDFVLTSRECGSQKPDPHIFREALKRAGTREAD---GVGVHIGDSFGKDVLGARGVGWDSFLVTQKGPSDDE------------KNVRHVRVGELTDVPVALG 786
++A R + T D TGT+MR++ + +Y L L E V A+ F + PCFGAG +SS +WW+ VVR AF+GAGV E + F TWEL+ + GV+ L W + G L +GV SNFD+RL +LL +LG+ FDFVLTSRE G +KP IF A +RAG D VH+GD+FG DVLGA GW + V SDD H R+ L VP +G
Sbjct: 5 VAATRPRLVTFDA-TGTLMRVQRPVGAIYRDALISSLSASKLARTADLSAAELAACNVDPVAIGRAFGRAYAAQCAAHPCFGAGSLSSRDWWSSVVREAFVGAGVSEAVVRAEMP-LLFPTLYESFASTATWELLDASAGVVQQLARWRAQLPPGELTIGVI------SNFDDRLPALLNSLGLGRYFDFVLTSREHGDEKPCRSIFERASERAGLATVDVSPRTCVHVGDTFGTDVLGASRAGWRAVFVA----SDDALGELMPEAFVAMAETEHERIPSLGFVPRIVG 282
BLAST of mRNA_F-serratus_M_contig117.1398.1 vs. uniprot
Match: A0A7S2G2K6_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G2K6_9STRA) HSP 1 Score: 140 bits (352), Expect = 9.620e-36 Identity = 83/231 (35.93%), Postives = 117/231 (50.65%), Query Frame = 1
Query: 19 EVATLDCCTGTIMRIKGSISRLYLGVLEERLGIEEGGIPGVCEQALLDTFQAFIKRRSQVSPCFGAG-VMSSEEWWADVVRTAFLGAGVPEESLEGVFDEXXXXXXXXXFTRGPTWELVPGTMGVISDLRAWCQEGGPLALGVTIRLTDKSNFDERLHSLLRNLGVYDLFDFVLTSRECGSQKPDPHIFREALKRAGTREADGVGVHIGDSFGKDVLGARGVGWDSFLVTQ 708
++ T D TGT++++ + Y VL + GI +P D F+ + Q SPCFG +S+++WWA VVR + GVP + ++ +F FT WEL TM V+ L+ W + G LGV SNFDERL LL LG+ D FD ++TS+ECG +KP IF AL R G E D VH+G+ + DV GA GW++ V +
Sbjct: 92 QLITFDA-TGTLIQLAEPVGMHYRQVLMKHTGIR---LPR--PDIFTDAFKEVYDAKCQASPCFGCSDSISAQDWWASVVRDTYTKVGVPSDIIDPLFPLLFDELYHEVFTGTDGWELNADTMMVLDKLKEWQETGDGPRLGVI------SNFDERLPKLLEALGIADYFDIIITSKECGMEKPCRQIFDIALTRLGIYERDAA-VHVGNDYDTDVKGATAAGWNALYVKE 309
BLAST of mRNA_F-serratus_M_contig117.1398.1 vs. uniprot
Match: A0A7S2STH1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2STH1_9STRA) HSP 1 Score: 138 bits (348), Expect = 5.770e-35 Identity = 96/259 (37.07%), Postives = 127/259 (49.03%), Query Frame = 1
Query: 22 VATLDCCTGTIMRIKGSISRLYLGVLEERLGIEEGGIPGVCEQALLDTFQAFIKRRSQVSPCFGAGV-MSSEEWWADVVRTAFLGAGVPEESLEGVFDEXXXXXXXXXFTRGPTWELVPGTMGVIS---DLRAWCQEGGPLALGVTIRLTDKSNFDERLHSLLRNLGVYDLFDFVLTSRECGSQKPDPHIFREALKRAGTREADGVGVHIGDSFGKDVLGARGVGWDSFLVT-----QKGPSDDEKNVRHVRVGELTDV 771
V T D TGT+M++ + Y L + G+ P + A F+ K +S+ PCFG G M S +WW VVR +L GVPE+ L+ + E F WEL + V+ +L+ E PL LGV SNFDERLH LL NLG+ FD VLTS+EC +KP+ IF AL R G + VHIGD+F KDV GA GW++ V K D ++ RVG+L+ V
Sbjct: 103 VVTFDA-TGTLMQLTEPVGMHYREALLQASGLRLPS-PDHFDAA----FKEVYKAQSEEFPCFGCGAAMPSRDWWYPVVRDTYLKTGVPEKILDPLLPEIFDSLYDNVFAGSEGWELNEQAIYVLDTLIELKESRAEDDPLYLGVI------SNFDERLHKLLDNLGIAHYFDIVLTSKECCVEKPNSPIFDMALSRLGIYDRSRA-VHIGDTFDKDVAGAARAGWNAIFVRAPPYRMKNVDDLPCDIEFQRVGDLSHV 348
BLAST of mRNA_F-serratus_M_contig117.1398.1 vs. uniprot
Match: A0A7S2PCP1_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PCP1_9STRA) HSP 1 Score: 132 bits (331), Expect = 2.220e-32 Identity = 84/249 (33.73%), Postives = 119/249 (47.79%), Query Frame = 1
Query: 19 EVATLDCCTGTIMRIKGSISRLYLGVLEERLGIEEG-GIPGVCEQALLDTFQAFIKRRSQVSPCFGAGV-MSSEEWWADVVRTAFL-------GAGVPEESLEGVFDEXXXXXXXXXFTRGPTWELVPGTMGVISDLRAWCQEGGPLALGVTIRLTDKSNFDERLHSLLRNLGVYDLFDFVLTSRECGSQKPDPHIFREALKRAGTREADGVGVHIGDSFGKDVLGARGVGWDSFLVTQKGPSDDEKNV 738
++ T D T T++++K + Y +L E P V A QAF + + PCFG G+ M+S EWWA+ + + G+ + + D F WEL PG + +S + W +EGGP +L SNFDERLHS+L +GV D FDFVLTSRE GS+KP+ F A+ RAG + + +H+GD F DV+GA GW S + D N+
Sbjct: 90 QLITFDA-TDTLIQLKSEVGMTYRLILHEATRFRSRLPTPAVFTSAFN---QAFTETNEKY-PCFGCGLGMTSREWWAECTKRTYALVEHIDYERGLRDRMDGPLGDAVAEVLYNQVFASTEAWELKPGVLDALSRFKMWREEGGP-------QLAVLSNFDERLHSILDQVGVADAFDFVLTSREIGSEKPNRSAFEVAMSRAGVADPS-LCMHVGDGFDSDVVGASNAGWHSVWIPPINGDDVPTNI 325
BLAST of mRNA_F-serratus_M_contig117.1398.1 vs. uniprot
Match: A0A7K9YY87_9GALL (Haloacid dehalogenase-like hydrolase domain-containing protein 3 (Fragment) n=1 Tax=Odontophorus gujanensis TaxID=886794 RepID=A0A7K9YY87_9GALL) HSP 1 Score: 114 bits (284), Expect = 6.150e-27 Identity = 79/225 (35.11%), Postives = 110/225 (48.89%), Query Frame = 1
Query: 49 TIMRIKGSISRLYLGVLEERLGIEEGGIPGVCEQALLDTFQAFIKRRSQVSPCFG-AGVMSSEEWWADVVRTAFLGAGVPEESLEGVFDEXXXXXXXXXFTRGPTWELVPGTMGVISDLRAWCQEGGPLALGVTIRLTDKSNFDERLHSLLRNLGVYDLFDFVLTSRECGSQKPDPHIFREALKRAGTREADGVGVHIGDSFGKDVLGARGVGWDSFLVTQKGPS 720
T++R++ + Y R G++ V +AL +F+A + +S P +G A +SS +WW DVV+ F AGV E++L + E F WEL+PG S+ +WC+ G L +GV SNFD RL S+L + F FVLTS G+ KPDP IFR AL+ G HIGD + D A+ VG SFL+ G S
Sbjct: 15 TLLRLRQPVGLSYAAEARAR-GVQ------VQPEALSRSFRAAYRAQSHRFPNYGRAEGLSSRQWWVDVVKQTFWLAGVHEDALLSLMAENLYRD----FCSARNWELLPGA----SETLSWCRRRG-LRMGVV------SNFDNRLESILVQCNLRHHFHFVLTSESAGAAKPDPEIFRAALRLGGVLPEQAA--HIGDDYSSDYRAAQEVGMHSFLLRSPGQS 215
BLAST of mRNA_F-serratus_M_contig117.1398.1 vs. uniprot
Match: A0A6P3Q776_PTEVA (Haloacid dehalogenase-like hydrolase domain-containing protein 3 n=4 Tax=Pteropodinae TaxID=77225 RepID=A0A6P3Q776_PTEVA) HSP 1 Score: 112 bits (281), Expect = 2.280e-26 Identity = 80/229 (34.93%), Postives = 112/229 (48.91%), Query Frame = 1
Query: 49 TIMRIKGSISRLYLGVLEERLGIEEGGIPGVCEQALLDTFQAFIKRRSQVSPCFGAGV-MSSEEWWADVVRTAFLGAGVPE-ESLEGVFDEXXXXXXXXXFTRGPTWELVPGTMGVISDLRAWCQEGGPLALGVTIRLTDKSNFDERLHSLLRNLGVYDLFDFVLTSRECGSQKPDPHIFREALKRAGTREADGVGVHIGDSFGKDVLGARGVGWDSFLVTQKGPSDDE 729
T++R++ I Y + G+E V AL F+ K +S P +G ++S +WW DVV F AG+ + +++ + D+ F+ TW+++ G + C++ G +RL SNFD RL +L LG+ + FDFVLTS G KPDP IFREAL+ A A HIGDS+ D GAR VG SFLV GP D E
Sbjct: 17 TLLRVRRPIGEEYASKAQAH-GLE------VEAAALGQAFRQVYKAQSHSFPNYGLSHGLTSRQWWLDVVLQTFHLAGIRDAQAVASIADQLYKD-----FSSPCTWQMLEGAEATLKG----CRKRG-------LRLAVVSNFDRRLEDILVGLGLREHFDFVLTSEATGWPKPDPRIFREALRLAHVEPA--AAAHIGDSYHCDYRGARAVGMHSFLVIGPGPLDSE 220
BLAST of mRNA_F-serratus_M_contig117.1398.1 vs. uniprot
Match: UPI001C715063 (rhythmically expressed gene 2 protein-like n=1 Tax=Penaeus japonicus TaxID=27405 RepID=UPI001C715063) HSP 1 Score: 111 bits (278), Expect = 6.260e-26 Identity = 71/195 (36.41%), Postives = 96/195 (49.23%), Query Frame = 1
Query: 154 LLDTFQAFIKRRSQVSPCFGAGVMSSEEWWADVVRTAFLGAG--VPEESLEGVFDEXXXXXXXXXFTRGPTWELVPGTMGVISDLRAWCQEGGPLALGVTIRLTDKSNFDERLHSLLRNLGVYDLFDFVLTSRECGSQKPDPHIFREALKRAGTREADGVGVHIGDSFGKDVLGARGVGWDSFLVTQKGPSDDEK 732
L F K++ ++SP FGA + + WW VVR F GA V +E+L V F+ +EL GT+ ++ + + + LG+ SN D+RL +LR LGV FDFV+ S + KPDP IF+ AL AG + +HIGD +D LGARG GW SFLV P EK
Sbjct: 40 LSQAFGLSFKKQEKISPNFGANCVGWQSWWLSVVRNTFHGADYHVDDETLTSV-----GYHLLKVFSTSNPYELFDGTIPLLEKISSRTPK-----LGII------SNSDDRLDGILRQLGVRHYFDFVICSYNVKAAKPDPKIFQHALAVAGGKIEPSEALHIGDDLQRDYLGARGSGWQSFLVRNNYPLICEK 218
BLAST of mRNA_F-serratus_M_contig117.1398.1 vs. uniprot
Match: A0A8C9L3R9_PAVCR (Haloacid dehalogenase-like hydrolase domain-containing protein 3 n=1 Tax=Pavo cristatus TaxID=9049 RepID=A0A8C9L3R9_PAVCR) HSP 1 Score: 110 bits (276), Expect = 9.360e-26 Identity = 72/192 (37.50%), Postives = 99/192 (51.56%), Query Frame = 1
Query: 148 QALLDTFQAFIKRRSQVSPCFG-AGVMSSEEWWADVVRTAFLGAGVPEESLEGVFDEXXXXXXXXXFTRGPTWELVPGTMGVISDLRAWCQEGGPLALGVTIRLTDKSNFDERLHSLLRNLGVYDLFDFVLTSRECGSQKPDPHIFREALKRAGTREADGVGVHIGDSFGKDVLGARGVGWDSFLVTQKGPS 720
+AL +F + +S+ P +G A +SS +WW DVV+ F AGV E+++ + E + WEL+P S+ +WC + G L +GV SNFD RL S+L + + FDFVLTS G KPDP IF+ AL+ G R + HIGD + KD AR VG SFL+ G S
Sbjct: 41 EALNQSFLKAYRAQSRRFPNYGRAEGLSSRQWWVDVVKETFRLAGVHEDTVLSLIAENLYRD----YCSAHNWELLPEA----SETLSWCHQQG-LRMGVV------SNFDNRLESILVHCSLRHHFDFVLTSEAVGVAKPDPKIFKTALRLGGVRPEEAA--HIGDDYSKDYRAAREVGMHSFLLHTPGQS 215
BLAST of mRNA_F-serratus_M_contig117.1398.1 vs. uniprot
Match: A0A8C4PXL1_EPTBU (Haloacid dehalogenase-like hydrolase domain-containing protein 3 n=1 Tax=Eptatretus burgeri TaxID=7764 RepID=A0A8C4PXL1_EPTBU) HSP 1 Score: 109 bits (272), Expect = 4.310e-25 Identity = 81/255 (31.76%), Postives = 120/255 (47.06%), Query Frame = 1
Query: 43 TGTIMRIKGSISRLY--LGVLEERLGIEEGGIPGVCEQALLDTFQAFIKRRSQVSPCFG---AGVMSSEEWWADVVRTAFLGAGVPEESLEGVFDEXXXXXXXXXFTRGPTWELVPGTMGVISDLRAWCQEGGPLALGVTIRLTDKSNFDERLHSLLRNLGVYDLFDFVLTSRECGSQKPDPHIFREALKRAGTREADGVGVHIGDSFGKDVLGARGVGWDSFLVTQKGPSDDEKNVR---HVRVGELTDVPVAL 783
TGT++R++GS+ Y G+L G+ +L F+ +S++ PC+G AG + WWA VV+ F GV + L + R WE+ G + +WC+ G RL SNFD+RL+ +L +G+ FDFVLTS E G+QKP P +F ALK G + G VHIGD D LGA G +FL+ ++ + + K++ H + L D+P L
Sbjct: 14 TGTLLRVRGSVGEQYKAAGLLF--------GLASPRVTSLNAAFREAYAHQSRLKPCYGSTCAGKSGANRWWASVVQETFNRCGVRDPPLIMKIADYLYHE----MKRPDRWEV----FGDVHPTLSWCKTQG-------FRLGVLSNFDKRLNDILSGVGLRSYFDFVLTSDEMGTQKPQPEVFHLALKHTGVQA--GQAVHIGDDPVTDYLGATSSGMAAFLL-KRNKAAELKSILIPPHRILDSLDDLPPLL 242 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig117.1398.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig117.1398.1 >prot_F-serratus_M_contig117.1398.1 ID=prot_F-serratus_M_contig117.1398.1|Name=mRNA_F-serratus_M_contig117.1398.1|organism=Fucus serratus male|type=polypeptide|length=267bp MSAARREVATLDCCTGTIMRIKGSISRLYLGVLEERLGIEEGGIPGVCEQback to top mRNA from alignment at F-serratus_M_contig117:639975..649255+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig117.1398.1 ID=mRNA_F-serratus_M_contig117.1398.1|Name=mRNA_F-serratus_M_contig117.1398.1|organism=Fucus serratus male|type=mRNA|length=9281bp|location=Sequence derived from alignment at F-serratus_M_contig117:639975..649255+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig117:639975..649255+ >mRNA_F-serratus_M_contig117.1398.1 ID=mRNA_F-serratus_M_contig117.1398.1|Name=mRNA_F-serratus_M_contig117.1398.1|organism=Fucus serratus male|type=CDS|length=1602bp|location=Sequence derived from alignment at F-serratus_M_contig117:639975..649255+ (Fucus serratus male)back to top |