prot_F-serratus_M_contig1167.1367.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig1167.1367.1
Unique Name	prot_F-serratus_M_contig1167.1367.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	213

Homology

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BLAST of mRNA_F-serratus_M_contig1167.1367.1 vs. uniprot
Match: D7G8V9_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8V9_ECTSI)

HSP 1 Score: 328 bits (842), Expect = 2.450e-112
Identity = 169/212 (79.72%), Postives = 183/212 (86.32%), Query Frame = 0

Query:    1 MKSVIALSIVLASASAFVPASPFVGSRMASVAQQPSSSALSMAASDMVGSSAPLGFFDPMGFSKGPEERLNEYRESELKHGRTAMLAVVGFLTQENWHPLYNGQLSSNPCKAIFEVPPEGLLQIAMFIGFLEYVISQVKLKPGYIPGDYVGSTELFDGGEGDDLWRTYQTKELNNGRAAMMGIAGLVTHNLLTGGMPAFEQISRGVYTGGIH 212
            MKSVIA S VLASASAFVP++ FVGS ++SV +  SS+A+SMAASDMVG+SAPLGFFDPMGFSKGP ERLN YRE+ELKHGRTAMLAVVGFLTQENWHPLYNG LSSNP KAI EVPPEGL QI MFIGFLEYVISQ+  KPGYIPGDYVG+ +LF        W TYQ KEL+NGRAAMMGI GLVTHN LTGGMPAFEQISRGVY+GGIH
Sbjct:    1 MKSVIAFSAVLASASAFVPSASFVGSPVSSVTRPASSTAVSMAASDMVGASAPLGFFDPMGFSKGPAERLNAYREAELKHGRTAMLAVVGFLTQENWHPLYNGGLSSNPVKAITEVPPEGLFQIVMFIGFLEYVISQIVAKPGYIPGDYVGANDLFSEEGPHSQWETYQLKELHNGRAAMMGITGLVTHNFLTGGMPAFEQISRGVYSGGIH 212

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BLAST of mRNA_F-serratus_M_contig1167.1367.1 vs. uniprot
Match: I2CPJ1_NANGC (Protein fucoxanthin chlorophyll a c protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CPJ1_NANGC)

HSP 1 Score: 182 bits (462), Expect = 1.160e-54
Identity = 102/202 (50.50%), Postives = 135/202 (66.83%), Query Frame = 0

Query:    5 IALSIVLASASAFVPASPFVGSRMASVAQQPSSSALSMAASDMVGSSAPLGFFDPMGFS-KGPEERLNEYRESELKHGRTAMLAVVGFLTQENWHPLYNGQLSSNPCKAIFEVPPEGLLQIAMFIGFLEYVISQVKLKPGYIPGDYVGSTELFDGGEGDDLWRTYQTKELNNGRAAMMGIAGLVTHNLLTGGMPAFEQISRG 205
            +A ++ +AS SAFVP +P        V         +M    M+GSSAP   FDP+GF+ K  ++ LN+YRESELKHGR AMLAV+G++ QE WHPLY+G+LSSNP KA+ EVP  G  QI + I  +EY+ +++K  PGY PGDY+G+ E  +  + D+ W  YQTKELNNGR AM+ IAGL+  +L+TG   A EQIS G
Sbjct:    9 LAAAVTMASVSAFVPPAPSAPRTRGVV---------NMGLDGMIGSSAPFKNFDPLGFAAKADQKTLNKYRESELKHGRVAMLAVLGWVVQEVWHPLYDGKLSSNPLKALTEVPLIGWAQIFVAINVIEYLQNKIKELPGYRPGDYLGTWEWVE--QSDEGWDNYQTKELNNGRLAMVAIAGLIAQDLITG-QAALEQISAG 198

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BLAST of mRNA_F-serratus_M_contig1167.1367.1 vs. uniprot
Match: A0A7S0XDX8_9STRA (Hypothetical protein n=2 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XDX8_9STRA)

HSP 1 Score: 161 bits (408), Expect = 1.000e-46
Identity = 89/158 (56.33%), Postives = 109/158 (68.99%), Query Frame = 0

Query:   46 DMVGSSAPLGFFDPMGFSKG-PEERLNEYRESELKHGRTAMLAVVGFLTQENWHPLYNGQLSSNPCKAIFEVPPEGLLQIAMFIGFLEYVISQVKLKPGYIPGDYVGSTELFDGGEGDDLWRTYQTKELNNGRAAMMGIAGLVTHNLLTGGMPAFEQI 202
            ++VG+SAPLGFFDP GFSKG  +E L +YRESELKHGR AMLAV+G+LTQE +HP Y G+LS NP  A  EVPP G +QI  FIG LEY I  ++ K  Y  GD++G   L D  + D  W + QT+ELNNGR AM  I G +TH  +TG   A EQ+
Sbjct:   37 ELVGASAPLGFFDPFGFSKGVSDETLFKYRESELKHGRVAMLAVLGWLTQERFHPFYEGKLSGNPLVAFGEVPPLGFVQIIAFIGLLEY-IGTIQNK--YQSGDFLGIKPLIDN-QDDSRWVSIQTRELNNGRLAMFAILGEITHAAITG-KGALEQL 189

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BLAST of mRNA_F-serratus_M_contig1167.1367.1 vs. uniprot
Match: A0A835YRG9_9STRA (Fucoxanthin chlorophyll a c protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRG9_9STRA)

HSP 1 Score: 162 bits (409), Expect = 1.080e-46
Identity = 93/192 (48.44%), Postives = 133/192 (69.27%), Query Frame = 0

Query:    5 IALSIVLASASAFVPASPFVGSRMASVAQQPSSSALSMAASDMVGSSAPLGFFDPMGF-SKGPEERLNEYRESELKHGRTAMLAVVGF-LTQENWHPLYNGQLSSNPCKAIFEVPPEGLLQIAMFIGFLEYVISQVKLKPGYIPGDYVGSTELFDGGEGDDLWRTYQTKELNNGRAAMMGIAGLVTHNLLTG 194
            +AL+ ++ASA+AF PA PF+G+R+A+V  + +SSA++M+  +M G SAPLGFFDP+GF SK   E + +YRESEL+HGRTAMLAV+G+  T+   H        +NP  A  +VP  G  QI  F G +E+V ++++ +PG+  GDY+GS +L D  EGDD W+++QTKELNNGR AM+   GL+    + G
Sbjct:    5 LALAAMVASAAAFAPA-PFMGTRLAAV--KAASSAVTMSVKEMPGVSAPLGFFDPLGFASKASPETITKYRESELRHGRTAMLAVLGWAFTEAGCHLPVFPNAGTNPLAAAGQVPFWGWAQIFAFCGVIEFVQAKIRERPGFQAGDYIGSGDLMD--EGDDQWKSFQTKELNNGRLAMLASIGLIGQTAIFG 191

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BLAST of mRNA_F-serratus_M_contig1167.1367.1 vs. uniprot
Match: A0A7S3AG67_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3AG67_9EUKA)

HSP 1 Score: 155 bits (391), Expect = 6.110e-44
Identity = 80/153 (52.29%), Postives = 104/153 (67.97%), Query Frame = 0

Query:   46 DMVGSSAPLGFFDPMGFSKGPE-ERLNEYRESELKHGRTAMLAVVGFLTQENWHPLYNGQLSSNPCKAIFEVPPEGLLQIAMFIGFLEYVISQVKLKPGYIPGDYVGSTELFDGGEGDDLWRTYQTKELNNGRAAMMGIAGLVTHNLLTGGMP 197
            DMVGSSAPLGFFDP+GFSK    E + ++RE+ELKHGR AMLAV G +T + +HPL+ GQ SSNP  A+ +VP  G LQI  FI F+E +      +P Y PG+++G+++     E D  W +YQTKELNNGR AM    G++TH  +TG  P
Sbjct:   47 DMVGSSAPLGFFDPLGFSKDASPETMKKFREAELKHGRVAMLAVFGMITADKFHPLFGGQCSSNPLLALTQVPKLGWLQILTFIMFMEVIGILNSRRPDYEPGNFLGTSQW----EMDATWDSYQTKELNNGRLAMFASIGMLTHAYITGKGP 195

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BLAST of mRNA_F-serratus_M_contig1167.1367.1 vs. uniprot
Match: A0A7S3IA89_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Favella ehrenbergii TaxID=182087 RepID=A0A7S3IA89_9SPIT)

HSP 1 Score: 152 bits (383), Expect = 4.150e-43
Identity = 77/153 (50.33%), Postives = 103/153 (67.32%), Query Frame = 0

Query:   46 DMVGSSAPLGFFDPMGFSKGPEER-LNEYRESELKHGRTAMLAVVGFLTQENWHPLYNGQLSSNPCKAIFEVPPEGLLQIAMFIGFLEYVISQVKLKPGYIPGDYVGSTELFDGGEGDDLWRTYQTKELNNGRAAMMGIAGLVTHNLLTGGMP 197
            DMVG+  PLGFFDP+GFSK      + ++RE+ELKHGR AMLA  G +T + +HPLY+G+LSSNP  AI +VP  GLLQI +FIGF+E        +P Y PGD++GS++     +  ++W  YQ +ELNNGR AM    G++TH  +TG  P
Sbjct:   19 DMVGACKPLGFFDPLGFSKDASPASMAKFREAELKHGRVAMLACAGMITADKFHPLYDGKLSSNPLLAIAQVPKLGLLQILLFIGFMEVFGILNSRRPDYKPGDFLGSSQW----DTTEVWDNYQLRELNNGRLAMFASIGMLTHAYITGKGP 167

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BLAST of mRNA_F-serratus_M_contig1167.1367.1 vs. uniprot
Match: Q2IA68_ISOGA (Chloroplast light harvesting protein isoform 11 n=1 Tax=Isochrysis galbana TaxID=37099 RepID=Q2IA68_ISOGA)

HSP 1 Score: 151 bits (382), Expect = 9.750e-43
Identity = 81/166 (48.80%), Postives = 106/166 (63.86%), Query Frame = 0

Query:   33 QQPSSSALSMAASDMVGSSAPLGFFDPMGFSK-GPEERLNEYRESELKHGRTAMLAVVGFLTQENWHPLYNGQLSSNPCKAIFEVPPEGLLQIAMFIGFLEYVISQVKLKPGYIPGDYVGSTELFDGGEGDDLWRTYQTKELNNGRAAMMGIAGLVTHNLLTGGMP 197
            QQP+   +      MVG SAPLGFFDP GFSK      + ++RE+ELKHGR AMLA  G +T + +HPLY+G+LSSNP  AI +VP  GLLQI +FIGF+E        +P Y PG+++GS +   G   DD    +Q +ELNNGR AM    G++TH+ +TG  P
Sbjct:   24 QQPACQGIQAKIKGMVGDSAPLGFFDPFGFSKEASPASMAKFREAELKHGRVAMLASAGMITADKFHPLYDGKLSSNPLLAISQVPKLGLLQIVLFIGFMEVFGILNSRRPDYQPGNFLGSAQWETGASWDD----FQVRELNNGRLAMFASIGMLTHSSITGKGP 185

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BLAST of mRNA_F-serratus_M_contig1167.1367.1 vs. uniprot
Match: A0A7S2XY15_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XY15_9STRA)

HSP 1 Score: 151 bits (381), Expect = 1.650e-42
Identity = 88/189 (46.56%), Postives = 119/189 (62.96%), Query Frame = 0

Query:    4 VIALSIVLASASAFVPASPFVGSRMASVAQQPSSSALSMAASDMVGSSAPLGFFDPMGFSKGPEERLNEYRESELKHGRTAMLAVVGFLTQENWHPLYNGQLSSNPCKAIFEVPPEGLLQIAMFIGFLEYVISQVKLKPGYIPGDYVGSTELFDGGEGDDLWRTYQTKELNNGRAAMMGIAGLVTHNLL 192
            VIA + ++A ASAFV     +G   A  + + +  A+ MAA DMVGS APLGFFDP+G SK  +  L ++RE ELKHGR AMLAV+G + QE +HPL+ G  S +P     +VP     Q   FIG +E + +++K + GY+ GD  G++ L D    D+ W  YQ KELN GRAAM GI G++TH+ L
Sbjct:    5 VIAFAALVAGASAFVAPRASLG---AISSARDTQGAMQMAAEDMVGSCAPLGFFDPLGLSKKSDAELQKFRECELKHGRVAMLAVLGCVVQEVFHPLFGGD-SGDPWSLAAKVPFAAWAQTLAFIGGVELLSNEIKKQDGYVTGDLFGASVLVDAA--DEGWENYQLKELNQGRAAMFGIMGMLTHSAL 187

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BLAST of mRNA_F-serratus_M_contig1167.1367.1 vs. uniprot
Match: A0A7S3TFW5_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3TFW5_EMIHU)

HSP 1 Score: 147 bits (372), Expect = 4.560e-41
Identity = 80/166 (48.19%), Postives = 106/166 (63.86%), Query Frame = 0

Query:   47 MVGSSAPLGFFDPMGFSKGPE-ERLNEYRESELKHGRTAMLAVVGFLTQENWHPLYNGQLSSNPCKAIFEVPPEGLLQIAMFIGFLEYVISQVKLKPGYIPGDYVGSTELFDGGEGDDLWRTYQTKELNNGRAAMMGIAGLVTHNLLTGGMPAFEQISRGVYTGGI 211
            MVG   PLG+FDP+GFSK    E + ++RE+ELKHGR AMLA  G +T + +HPL+ G+LSSNP  AI +VP  GLLQI +FIGF+E        +P Y PG+++G+++     E    W  YQ +ELNNGR AM G  G++TH  +TG  P  E +  G   GGI
Sbjct:   49 MVGDCKPLGYFDPLGFSKDASPETMAKFREAELKHGRVAMLACAGMITADKFHPLFGGKLSSNPLLAITQVPKLGLLQILLFIGFMEVFGILNSRRPDYEPGNFLGTSQW----ETTPTWDAYQLRELNNGRLAMFGAIGMLTHAYITGKGP-LELLDAG--NGGI 207

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BLAST of mRNA_F-serratus_M_contig1167.1367.1 vs. uniprot
Match: A0A7S0E1K9_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0E1K9_9EUKA)

HSP 1 Score: 146 bits (368), Expect = 1.110e-40
Identity = 74/163 (45.40%), Postives = 105/163 (64.42%), Query Frame = 0

Query:   36 SSSALSMAASDMVGSSAPLGFFDPMGFSKGPE-ERLNEYRESELKHGRTAMLAVVGFLTQENWHPLYNGQLSSNPCKAIFEVPPEGLLQIAMFIGFLEYVISQVKLKPGYIPGDYVGSTELFDGGEGDDLWRTYQTKELNNGRAAMMGIAGLVTHNLLTGGMP 197
            SS A+ M    ++G  APL +FDP+GFSK    E + +YRE+ELKHGR AMLA  G +TQ+ WHPL++G+LS+NP  AI + P  G++QI +FI F+E +      +  Y PG+++GS++   G    + W  YQ KELNNGR AM G  G++  + +TG  P
Sbjct:   23 SSVAVQMKVGGLIGDCAPLAYFDPLGFSKDASPETMKKYREAELKHGRVAMLAAWGMITQDAWHPLFDGKLSANPLLAIIQTPKLGVIQILIFIAFIEVIGILNTRRADYEPGNFLGSSQWETG----ETWENYQLKELNNGRLAMFGSIGMLVGSYITGKGP 181

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig1167.1367.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig1167.1367.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G8V9_ECTSI	2.450e-112	79.72	Light harvesting complex protein n=2 Tax=Ectocarpu...	[more]
I2CPJ1_NANGC	1.160e-54	50.50	Protein fucoxanthin chlorophyll a c protein n=1 Ta...	[more]
A0A7S0XDX8_9STRA	1.000e-46	56.33	Hypothetical protein n=2 Tax=Chromulina nebulosa T...	[more]
A0A835YRG9_9STRA	1.080e-46	48.44	Fucoxanthin chlorophyll a c protein n=1 Tax=Tribon...	[more]
A0A7S3AG67_9EUKA	6.110e-44	52.29	Hypothetical protein n=1 Tax=Haptolina ericina Tax...	[more]
A0A7S3IA89_9SPIT	4.150e-43	50.33	Hypothetical protein (Fragment) n=1 Tax=Favella eh...	[more]
Q2IA68_ISOGA	9.750e-43	48.80	Chloroplast light harvesting protein isoform 11 n=...	[more]
A0A7S2XY15_9STRA	1.650e-42	46.56	Hypothetical protein n=1 Tax=Fibrocapsa japonica T...	[more]
A0A7S3TFW5_EMIHU	4.560e-41	48.19	Hypothetical protein n=1 Tax=Emiliania huxleyi Tax...	[more]
A0A7S0E1K9_9EUKA	1.110e-40	45.40	Hypothetical protein n=1 Tax=Phaeocystis antarctic...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023329	Chlorophyll a/b binding domain superfamily	GENE3D	1.10.3460.10		coord: 36..207 e-value: 1.5E-26 score: 95.4
IPR022796	Chlorophyll A-B binding protein	PFAM	PF00504	Chloroa_b-bind	coord: 49..190 e-value: 9.1E-30 score: 104.3
IPR001344	Chlorophyll A-B binding protein, plant	PANTHER	PTHR21649	CHLOROPHYLL A/B BINDING PROTEIN	coord: 3..198
None	No IPR available	PANTHER	PTHR21649:SF63		coord: 3..198
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 4..12
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 21..212
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..20
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 13..20
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..3
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..16 score: 0.731
None	No IPR available	SUPERFAMILY	103511	Chlorophyll a-b binding protein	coord: 37..194

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig1167	contig	F-serratus_M_contig1167:118217..130755 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig1167.1367.1	mRNA_F-serratus_M_contig1167.1367.1	Fucus serratus male	mRNA	F-serratus_M_contig1167 117572..130859 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig1167.1367.1 ID=prot_F-serratus_M_contig1167.1367.1|Name=mRNA_F-serratus_M_contig1167.1367.1|organism=Fucus serratus male|type=polypeptide|length=213bp
MKSVIALSIVLASASAFVPASPFVGSRMASVAQQPSSSALSMAASDMVGS
SAPLGFFDPMGFSKGPEERLNEYRESELKHGRTAMLAVVGFLTQENWHPL
YNGQLSSNPCKAIFEVPPEGLLQIAMFIGFLEYVISQVKLKPGYIPGDYV
GSTELFDGGEGDDLWRTYQTKELNNGRAAMMGIAGLVTHNLLTGGMPAFE
QISRGVYTGGIH*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR023329	Chlorophyll_a/b-bd_dom_sf
IPR022796	Chloroa_b-bind
IPR001344	Chloro_AB-bd_pln