prot_F-serratus_M_contig116.1322.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig116.1322.1
Unique Nameprot_F-serratus_M_contig116.1322.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length265
Homology
BLAST of mRNA_F-serratus_M_contig116.1322.1 vs. uniprot
Match: A0A6H5JSX4_9PHAE (G domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSX4_9PHAE)

HSP 1 Score: 298 bits (762), Expect = 1.970e-97
Identity = 150/259 (57.92%), Postives = 200/259 (77.22%), Query Frame = 0
Query:    1 VEFNDLVVVDTPGMPNKDPHKTVAYFDAVVQAMRREDSLSTLLFLVKQEVACPSEFKQYSVLLEQFNHIPCSKLMVCRQLALSRKSKKTEAEKRYEGAKYVERVLEASRLNMPLMLLTDGYGNEAFQQVEKIVNFVLRSERVRFD-APTCRTSEELKHFVSRLADKATRLETLKQDVEEAEMSLWNRTLWMASQVVPLAYLSVASVGAVFLWTGPYVKREQETCTELRVAIMKKKKELERGVVDDEGLQTARNVLSILE 258
            VE+ DLVV+DTPG P  DP  T   FDA+V+A+RRE SLSTL+FLV+QE   P+EF+ Y+VLL Q NH+PCSKL+VCRQ ALSR+ K+TE E+R+ GA++VE VL+ S LNMPL+LL DGYG+E+ +QV++I  FV RSER R D   + RT  EL+ F ++LAD A+RL T++++VE+ E SLW+R+LWMA QVVPLAY+SV+S GA  +WTGPYVKREQE C  LR  +  KK+E+E  +VD++ L+ A+ VL+ L+
Sbjct:   78 VEWADLVVIDTPGFPGHDPKTTSKNFDALVKALRREGSLSTLIFLVQQEEVSPTEFRDYAVLLRQLNHLPCSKLIVCRQAALSRRHKRTEEERRHSGAQFVEGVLDDSGLNMPLVLLNDGYGSESIKQVDEIRRFVGRSERARLDLVASLRTFAELRSFAAKLADPASRLRTVREEVEQMEASLWHRSLWMACQVVPLAYISVSSPGAGCIWTGPYVKREQEACARLRKELNDKKEEIELDIVDEQELRAAQGVLAFLD 336          
BLAST of mRNA_F-serratus_M_contig116.1322.1 vs. uniprot
Match: D8LN49_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN49_ECTSI)

HSP 1 Score: 179 bits (454), Expect = 7.620e-53
Identity = 93/167 (55.69%), Postives = 125/167 (74.85%), Query Frame = 0
Query:   93 KRYEGAKYVERVLEASRLNMPLMLLTDGYGNEAFQQVEKIVNFVLRSERVRFDA-PTCRTSEELKHFVSRLADKATRLETLKQDVEEAEMSLWNRTLWMASQVVPLAYLSVASVGAVFLWTGPYVKREQETCTELRVAIMKKKKELERGVVDDEGLQTARNVLSILE 258
            KR+ GA++VE VLE S LNMPL+LL DGYG+E+F+QV++I  FV RSER R D   + RT  EL+ F ++LAD A+RL TL+++VE+ E SLW+R+LWMA  VVPLAY+SV+S GA  +WTGPYVKREQE C  LR  +  KK+E+E  +VD++ L  A+ V + L+
Sbjct:   26 KRHAGAQFVEGVLEDSGLNMPLVLLNDGYGSESFKQVDEIRRFVGRSERARLDPLASPRTFAELRSFAAKLADPASRLRTLREEVEQMEASLWHRSLWMACHVVPLAYISVSSPGAGCIWTGPYVKREQEACARLRKELNDKKEEIELDIVDEQELCAAQGVSAFLD 192          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig116.1322.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JSX4_9PHAE1.970e-9757.92G domain-containing protein n=1 Tax=Ectocarpus sp.... [more]
D8LN49_ECTSI7.620e-5355.69Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 159..182
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 188..211
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 212..264
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..187
NoneNo IPR availableTMHMMTMhelixcoord: 189..211

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig116contigF-serratus_M_contig116:579639..581805 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig116.1322.1mRNA_F-serratus_M_contig116.1322.1Fucus serratus malemRNAF-serratus_M_contig116 579639..581805 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig116.1322.1 ID=prot_F-serratus_M_contig116.1322.1|Name=mRNA_F-serratus_M_contig116.1322.1|organism=Fucus serratus male|type=polypeptide|length=265bp
VEFNDLVVVDTPGMPNKDPHKTVAYFDAVVQAMRREDSLSTLLFLVKQEV
ACPSEFKQYSVLLEQFNHIPCSKLMVCRQLALSRKSKKTEAEKRYEGAKY
VERVLEASRLNMPLMLLTDGYGNEAFQQVEKIVNFVLRSERVRFDAPTCR
TSEELKHFVSRLADKATRLETLKQDVEEAEMSLWNRTLWMASQVVPLAYL
SVASVGAVFLWTGPYVKREQETCTELRVAIMKKKKELERGVVDDEGLQTA
RNVLSILEDFSHNP*
back to top