prot_F-serratus_M_contig1159.1297.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1159.1297.1
Unique Nameprot_F-serratus_M_contig1159.1297.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length803
Homology
BLAST of mRNA_F-serratus_M_contig1159.1297.1 vs. uniprot
Match: D7FT47_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT47_ECTSI)

HSP 1 Score: 584 bits (1505), Expect = 1.710e-194
Identity = 406/863 (47.05%), Postives = 512/863 (59.33%), Query Frame = 0
Query:    1 MVDYRKWDRMDFDVSDSDSDTAEGTRGKIPHGQQLSNTPERTGAHDVATGDARIFEHAEVLRLKGNSLFESGDIPAAIGAYEAQLQLLEGRGDEASLDVTRAALLNQASGLIRLQKFGEAEARCTRILTCSGSTAGRGREDGGGGDARMRALHFRGFARLRQGLFEGACSDLERALAAGDPKDDEARALLKEAEAGAALSSCCDPEAKARALLGEKQAVEAAKYFREAASRARRHCNAQPRLGSEGNKGDAR--VALARNLRMEGVAVSASGDLAAAEMLLMGGLKELR-GLVDVTDSVERAGVVGEEGLMLSALGRVLGQQRKQRQAVEVMRDAVDRLEDAVVG--AVQDGRGHKSDDEGAELPPPRFPEASSSSSSSKAITKAR--DLTPQLARTLARLGSEVL--NLQSRGGAGQDGENNNNYSGH-------PSGAAKVDARLP-------------------STVPDEAIQILERALSLMKAEAADVSRVS---RAGETVVHEG-----SEKDVRHQVATVLDSLSEAYARGKYWEKARSSAEQAVTGWRSLGEPLRAGAAVSLLSLGHILLQLHGIGAGLDEASARWEEAVA-FIDDSTRPLEAVDVRLKVAGYYAGAARADPSRLESLEAKMAEHYRATAALLARVREGDQRT---EEGANGTAAAAAPAHFTVRKCRLSGLCMCIAKALT----------FELAGKEALALEGYAGAVGDDHDEAVKALRKAAELLDLANVSQRDVTWTLRKVGVLQNLALALAKNGEHALSEEKLLDAIAALEQLDDVGTI-----HGETLKNLHKYLAIARRARGDMLGAKKALDRVESLAGDAGREEAENLNRLLGHNRISI 801
            MVDY KWD +D D S S SD      G           P    A D    D R  + AE LRL+GNS +E GD+  AI AY+AQL++LEGR DEA++++T  ALLNQASG I L+KF EAEARC+R+L  + +T   G +  GG +AR RALHFRGFAR R GLF+GACSDL  +LAAG    DEARALL EAEAGAA+SSC DPEA+ R  L + +  EAAK FR+AASRARR  +A    G+E  +G     VAL+RNLR+EG+AV+ +GD  +AEMLL   L++LR G               EEGL L+ALG +L Q+ K   A+E +R+AV  L++A+ G  A + G  + S    A   PP           + +IT+ R   LT  L  TLA LG+ +L   +Q     G +G +    S           GA KV    P                   S   DEAI +L+RA  ++KAE   ++      + G   V+        E DVR Q A VLD+LSEAY R K WE+AR +AEQ++T WRSLG   R GAA SLLSLGH+LLQLHG+GAG +EASARWEEA   F   + RP    +VRLK+AGYY   AR+DP+RLESLE K++ HY   A L AR R  D++T   +  A   AAA AP   T      +     +   L           +ELA +EA A EGYAGA G+DH+ AV AL KA +LLD A+VS +D  WTLRKVGVL +LALALA++GEHA++E KLL+AI  L+QLD V +I     H  TL +L+KYLAI RRARGD  GAK AL +VE+L G  G EE E LNRLL  + +S+
Sbjct:    1 MVDYSKWDNLDSDDSGSGSD------GXXXXXXXXXXXPSARKAAD----DKRQLDQAEALRLQGNSAYELGDVSKAIAAYDAQLRVLEGRKDEAAVEMTCGALLNQASGFISLKKFKEAEARCSRLL--ASATPRGGTKAYGGAEARTRALHFRGFARFRLGLFDGACSDLRSSLAAGTSSGDEARALLLEAEAGAAMSSCPDPEAEGREHLRQGRGREAAKSFRDAASRARRRKDA---AGAEAGEGAVATTVALSRNLRLEGIAVAMAGDPPSAEMLLRTALRDLRVGGXXXXXXXXXXXXXEEEGLTLAALGSLLAQRGKHADALEPLREAVAVLDEAIAGVSANEGGVANSSAGTNARSSPP-----------TPSITEGRITALTRTLTGTLAFLGTSLLAPEVQPSANYGSNGSSTTTTSSGGVTPGVMKGGAEKVTVPAPGFSCDDKGPIVADSGEAGSSKEADEAIDVLKRAHEMLKAETVAMATAGPGQKGGLAGVYSAVGESRGEADVRKQTAKVLDTLSEAYGREKRWERARLAAEQSLTAWRSLGVAGRVGAAASLLSLGHLLLQLHGVGAGFEEASARWEEAATCFKGCAERPSVEAEVRLKIAGYYTKVARSDPARLESLEGKISAHYSEAAVLFARER--DEKTSSLKRAAEAVAAAQAPRDKTAEGSGSAEPVPPLPPPLVDSLEPDGRSRWELAEQEAFAWEGYAGAAGEDHEAAVTALAKAEKLLDHASVSDKDERWTLRKVGVLHSLALALARSGEHAMAENKLLEAIRELQQLDGVDSIAEACVHKGTLTDLYKYLAIVRRARGDFAGAKAALAKVETLGGCEGSEELEGLNRLLAESAVSV 835          
BLAST of mRNA_F-serratus_M_contig1159.1297.1 vs. uniprot
Match: UPI0009E2AEF9 (RNA polymerase II-associated protein 3-like n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E2AEF9)

HSP 1 Score: 64.7 bits (156), Expect = 4.630e-7
Identity = 55/190 (28.95%), Postives = 84/190 (44.21%), Query Frame = 0
Query:    3 DYRKWDRMDFDVSDSDSDTAEGTRGKIPHGQQLSNTPERTGAHDVATGDARIFEHAEVLRLKGNSLFESGDIPAAIGAYEAQLQLLEGRGDEASLDVTRAAL-LNQASGLIRLQKFGEAEARCTRILTCSGSTAGRGREDGGGGDARMRALHFRGFARLRQGLFEGACSDLERALAAGDPKDDEARALLK 191
            DYR WD+ D D   +D D  E  +         S++ E +   D    + R  + A + + KGN+LF+ G    AI  Y A +Q           D T A L  N+A  L++LQ++G AEA C + L   GS                +A   RG AR + G  + A +D  + L   +P + +A+  +K
Sbjct:  111 DYRSWDKFDVDKVLTDMDEQEEMK-------TFSSSEEESDETDEEVENERKLQRALLEKDKGNALFKEGKFEEAINCYTAGIQF----------DPTNAILPANRAMCLLKLQRYGAAEADCNQALLLDGSYT--------------KAYLRRGAARFQLGRIQEAEADYRKVLKL-EPSNRQAQEEMK 268          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1159.1297.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FT47_ECTSI1.710e-19447.05Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
UPI0009E2AEF94.630e-728.95RNA polymerase II-associated protein 3-like n=1 Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 704..737
e-value: 93.0
score: 6.5
coord: 149..183
e-value: 200.0
score: 3.6
coord: 58..91
e-value: 13.0
score: 14.0
coord: 101..134
e-value: 220.0
score: 3.2
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 364..621
e-value: 7.6E-8
score: 33.8
coord: 653..798
e-value: 2.0E-6
score: 29.1
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 48..197
e-value: 1.8E-14
score: 55.7
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 56..453
NoneNo IPR availablePANTHERPTHR46423FAMILY NOT NAMEDcoord: 2..363

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1159contigF-serratus_M_contig1159:77045..96562 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1159.1297.1mRNA_F-serratus_M_contig1159.1297.1Fucus serratus malemRNAF-serratus_M_contig1159 76466..96635 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1159.1297.1 ID=prot_F-serratus_M_contig1159.1297.1|Name=mRNA_F-serratus_M_contig1159.1297.1|organism=Fucus serratus male|type=polypeptide|length=803bp
MVDYRKWDRMDFDVSDSDSDTAEGTRGKIPHGQQLSNTPERTGAHDVATG
DARIFEHAEVLRLKGNSLFESGDIPAAIGAYEAQLQLLEGRGDEASLDVT
RAALLNQASGLIRLQKFGEAEARCTRILTCSGSTAGRGREDGGGGDARMR
ALHFRGFARLRQGLFEGACSDLERALAAGDPKDDEARALLKEAEAGAALS
SCCDPEAKARALLGEKQAVEAAKYFREAASRARRHCNAQPRLGSEGNKGD
ARVALARNLRMEGVAVSASGDLAAAEMLLMGGLKELRGLVDVTDSVERAG
VVGEEGLMLSALGRVLGQQRKQRQAVEVMRDAVDRLEDAVVGAVQDGRGH
KSDDEGAELPPPRFPEASSSSSSSKAITKARDLTPQLARTLARLGSEVLN
LQSRGGAGQDGENNNNYSGHPSGAAKVDARLPSTVPDEAIQILERALSLM
KAEAADVSRVSRAGETVVHEGSEKDVRHQVATVLDSLSEAYARGKYWEKA
RSSAEQAVTGWRSLGEPLRAGAAVSLLSLGHILLQLHGIGAGLDEASARW
EEAVAFIDDSTRPLEAVDVRLKVAGYYAGAARADPSRLESLEAKMAEHYR
ATAALLARVREGDQRTEEGANGTAAAAAPAHFTVRKCRLSGLCMCIAKAL
TFELAGKEALALEGYAGAVGDDHDEAVKALRKAAELLDLANVSQRDVTWT
LRKVGVLQNLALALAKNGEHALSEEKLLDAIAALEQLDDVGTIHGETLKN
LHKYLAIARRARGDMLGAKKALDRVESLAGDAGREEAENLNRLLGHNRIS
ID*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf