mRNA_F-serratus_M_contig115.1267.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig115.1267.1
Unique NamemRNA_F-serratus_M_contig115.1267.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig115.1267.1 vs. uniprot
Match: A0A6H5KCG6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCG6_9PHAE)

HSP 1 Score: 184 bits (468), Expect = 1.040e-54
Identity = 100/215 (46.51%), Postives = 133/215 (61.86%), Query Frame = 1
Query:   16 YRPLVGSLMRLSVTTRPDIDNALRACARHSHNPSARHWKALQQIAAYVNFLKEIGLKFVLGSCLKL--TVFADADYAAAPNDRRPVSGVAVILGDTAIGWKSSTQKCVTTVACEAEYVALYDTSKEALFMRAVLVFLQPELTGMRVDVFGHNEGAKAIANNPSSASRSKHIDLKLHLIRGSVCAGDVRVLDVRTAEQHADVLIKPLWRKKFMLHR 654
            +R +VGSLM ++  TR DI NA+RA ARHSH P   HWKA Q+I  Y+     + LKF   S + +   V+ DAD+A+   DRR VSG  V +    + W S TQKCV+    EAEY+A+ D  KEALF+  +L FL+P +   ++DV   NEGA A+A NP S+SRSKHID++ H +R     G + V  V + EQHAD+L K L R  F +HR
Sbjct:   36 FREVVGSLMWIASQTRADISNAVRAVARHSHEPKKSHWKAAQKILNYLLETAHLTLKFKRDSSVDVGTLVYVDADFASKATDRRSVSGAMVFVAAMLVVWISRTQKCVSQSTSEAEYLAMGDGVKEALFVNGMLQFLRPSVKPRKIDVLEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSKEQHADILTKALPRDLFEVHR 250          
BLAST of mRNA_F-serratus_M_contig115.1267.1 vs. uniprot
Match: A0A6H5KBM6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBM6_9PHAE)

HSP 1 Score: 183 bits (465), Expect = 2.150e-53
Identity = 99/215 (46.05%), Postives = 132/215 (61.40%), Query Frame = 1
Query:   16 YRPLVGSLMRLSVTTRPDIDNALRACARHSHNPSARHWKALQQIAAYVNFLKEIGLKFVLGSCLKLT--VFADADYAAAPNDRRPVSGVAVILGDTAIGWKSSTQKCVTTVACEAEYVALYDTSKEALFMRAVLVFLQPELTGMRVDVFGHNEGAKAIANNPSSASRSKHIDLKLHLIRGSVCAGDVRVLDVRTAEQHADVLIKPLWRKKFMLHR 654
            +R +VGSLM ++  TRPDI NALRA  RHSH P   HWKA Q+I  Y+     + LKF   + +  +  V+ DAD+A+  NDRR VSG  V++    + W S TQKCV+    EAEY A+ D  K+ALF+  +L FL+P     ++DV   NE A A+A NP S+SRSKHID++ H +R     G + V  V + EQHAD+L K L R  F +HR
Sbjct:  107 FREVVGSLMWIANQTRPDISNALRAVVRHSHEPKKSHWKAAQKILNYLLETAHLTLKFKPDNSVDASTLVYVDADFASKANDRRSVSGAIVLVASMPVVWISKTQKCVSQSISEAEYFAMGDGVKKALFVNGMLQFLRPSANPRKIDVLEDNEEAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSEEQHADILTKALPRDLFEVHR 321          
BLAST of mRNA_F-serratus_M_contig115.1267.1 vs. uniprot
Match: A0A6H5K274_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K274_9PHAE)

HSP 1 Score: 192 bits (487), Expect = 2.960e-53
Identity = 101/223 (45.29%), Postives = 141/223 (63.23%), Query Frame = 1
Query:    4 EFPLYRPLVGSLMRLSVTTRPDIDNALRACARHSHNPSARHWKALQQIAAYVNFLKEIGLKFVLGSCLKLTVFADADYAAAPNDRRPVSGVAVILGDTAIGWKSSTQKCVTTVACEAEYVALYDTSKEALFMRAVLVFLQPELTGMRVDVFGHNEGAKAIANNPSSASRSKHIDLKLHLIRGSVCAGDVRVLDVRTAEQHADVLIKPLWRKKFMLHRAALMNL 672
            E+P+ R  +GS+M +S  +RPD+  A+RA ARH+H P+ RHW A+Q+I  Y+   +++G+ +  GS L L V+ DA YA    DRR VSG+A  +G T +   S TQ  V+  + EAEY+A  +  KEALF+RAVL+F+ PE  G  + V   N+GA A+  NP S+ R+ HID++ H IRG   +GD+ V  V T EQHAD+L K L +     HR  LMNL
Sbjct:  535 EWPV-REAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYADT-EDRRSVSGLATTVGGTVVSHGSKTQSIVSLSSMEAEYIAAGEGVKEALFVRAVLLFVAPETRGSSIQVLEDNQGAMALVQNPLSSGRTTHIDVRFHFIRGLFGSGDISVKFVPTTEQHADLLTKALRKASLQYHRRKLMNL 755          
BLAST of mRNA_F-serratus_M_contig115.1267.1 vs. uniprot
Match: A0A6H5J8M4_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8M4_9PHAE)

HSP 1 Score: 179 bits (453), Expect = 1.110e-52
Identity = 96/216 (44.44%), Postives = 132/216 (61.11%), Query Frame = 1
Query:   16 YRPLVGSLMRLSVTTRPDIDNALRACARHSHNPSARHWKALQQIAAYVNFLKEIGLKFVLGSCLK---LTVFADADYAAAPNDRRPVSGVAVILGDTAIGWKSSTQKCVTTVACEAEYVALYDTSKEALFMRAVLVFLQPELTGMRVDVFGHNEGAKAIANNPSSASRSKHIDLKLHLIRGSVCAGDVRVLDVRTAEQHADVLIKPLWRKKFMLHR 654
            +R +VG LM ++  TRPDI NA+RA ARHSH P  R WKA Q+I  Y+     + LK+   S +      V+ DAD+A+   DRR VSG  VI+    + W S TQKCV+    EAEY+A+ D  KE+LF+  +L FL+P +   ++DV   NEGA A+A NP S+ RSKHID++ H +R     G + +  V + +QHAD+L K L R  F +HR
Sbjct:   17 FREVVGCLMWVANGTRPDISNAVRAVARHSHEPKKRDWKAAQKILNYLLATAHLTLKYKRDSTVDDVGTLVYVDADFASKATDRRSVSGALVIVAACLVAWLSWTQKCVSQSTSEAEYLAMGDGVKESLFVNGMLQFLRPSVEPRKIDVLEDNEGAIALAENPLSSCRSKHIDVRHHFLRNLTEEGVIEITHVPSEKQHADILTKALPRSIFEVHR 232          
BLAST of mRNA_F-serratus_M_contig115.1267.1 vs. uniprot
Match: A0A6H5JW47_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW47_9PHAE)

HSP 1 Score: 178 bits (451), Expect = 1.860e-52
Identity = 96/222 (43.24%), Postives = 131/222 (59.01%), Query Frame = 1
Query:   16 YRPLVGSLMRLSVTTRPDIDNALRACARHSHNPSARHWKALQQIAAYVNFLKEIGLKFVLGSCLKL--TVFADADYAAAPNDRRPVSGVAVILGDTAIGWKSSTQKCVTTVACEAEYVALYDTSKEALFMRAVLVFLQPELTGMRVDVFGHNEGAKAIANNPSSASRSKHIDLKLHLIRGSVCAGDVRVLDVRTAEQHADVLIKPLWRKKFMLHRAALMNLS 675
            +R +VG LM ++  TRPDI NA+RA ARHSH P   HWKA Q+I  Y+     + L F   S + +   V+  AD+A+   DRR VSG  V +    + W S TQKCV     EAEY+A+ D  KEALF   +L FL+P      + V   NEGA A+A+NP S+ R KHID++ H +R     G +++  V + EQHAD+L K L R+ F +HR  ++ LS
Sbjct:   11 FREVVGCLMWIACQTRPDISNAVRAVARHSHEPKLSHWKAAQKILNYLLGTAHLSLNFKRDSSVDVGTLVYVAADFASKATDRRSVSGALVFVAGMLVVWTSRTQKCVAQSTSEAEYLAMGDGVKEALFEDGMLQFLRPSEKSREIKVLEDNEGAIALADNPLSSGRRKHIDVRHHFLRSLTEEGRIKISHVSSKEQHADILTKALPRELFEVHRNFVLGLS 232          
BLAST of mRNA_F-serratus_M_contig115.1267.1 vs. uniprot
Match: A0A6H5KKK1_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKK1_9PHAE)

HSP 1 Score: 189 bits (480), Expect = 9.710e-52
Identity = 101/215 (46.98%), Postives = 135/215 (62.79%), Query Frame = 1
Query:   16 YRPLVGSLMRLSVTTRPDIDNALRACARHSHNPSARHWKALQQIAAYVNFLKEIGLKFVLGSCLKLT--VFADADYAAAPNDRRPVSGVAVILGDTAIGWKSSTQKCVTTVACEAEYVALYDTSKEALFMRAVLVFLQPELTGMRVDVFGHNEGAKAIANNPSSASRSKHIDLKLHLIRGSVCAGDVRVLDVRTAEQHADVLIKPLWRKKFMLHR 654
            +R +VGSLM ++  TRPDI NA+RA ARHSH P   HWKA Q+I  Y+     + LKF   + +  +  V+ DAD+A+  NDRR VSG  V++    + W S TQKCV+    EAEY+A+ D  KEALF+  +L FL+P     ++DV   NEGA A+A NP S+SRSKHID++ H +R     G + V  V + EQHAD+L K L R  F +HR
Sbjct:  738 FREVVGSLMWIANQTRPDISNAVRAVARHSHEPKKSHWKAAQKILNYLLETAHLTLKFKPDNSVDASTLVYVDADFASKANDRRSVSGAIVLVASMPVVWISKTQKCVSQSTSEAEYLAMGDGVKEALFVNGMLQFLRPSAKPRKIDVLEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSEEQHADILTKALPRDLFEVHR 952          
BLAST of mRNA_F-serratus_M_contig115.1267.1 vs. uniprot
Match: A0A6H5JRL9_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRL9_9PHAE)

HSP 1 Score: 189 bits (480), Expect = 1.330e-51
Identity = 101/215 (46.98%), Postives = 135/215 (62.79%), Query Frame = 1
Query:   16 YRPLVGSLMRLSVTTRPDIDNALRACARHSHNPSARHWKALQQIAAYVNFLKEIGLKFVLGSCLKLT--VFADADYAAAPNDRRPVSGVAVILGDTAIGWKSSTQKCVTTVACEAEYVALYDTSKEALFMRAVLVFLQPELTGMRVDVFGHNEGAKAIANNPSSASRSKHIDLKLHLIRGSVCAGDVRVLDVRTAEQHADVLIKPLWRKKFMLHR 654
            +R +VGSLM ++  TRPDI NA+RA ARHSH P   HWKA Q+I  Y+     + LKF   + +  +  V+ DAD+A+  NDRR VSG  V++    + W S TQKCV+    EAEY+A+ D  KEALF+  +L FL+P     ++DV   NEGA A+A NP S+SRSKHID++ H +R     G + V  V + EQHAD+L K L R  F +HR
Sbjct: 1005 FREVVGSLMWIANQTRPDISNAVRAVARHSHEPKKSHWKAAQKILNYLLETAHLTLKFKPDNSVDASTLVYVDADFASKANDRRSVSGAIVLVASMPVVWISKTQKCVSQSTSEAEYLAMGDGVKEALFVNGMLQFLRPSAKPRKIDVLEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSEEQHADILTKALPRDLFEVHR 1219          
BLAST of mRNA_F-serratus_M_contig115.1267.1 vs. uniprot
Match: A0A6H5JTP8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTP8_9PHAE)

HSP 1 Score: 176 bits (445), Expect = 7.870e-51
Identity = 93/215 (43.26%), Postives = 130/215 (60.47%), Query Frame = 1
Query:   16 YRPLVGSLMRLSVTTRPDIDNALRACARHSHNPSARHWKALQQIAAYVNFLKEIGLKFVLGSCLKL--TVFADADYAAAPNDRRPVSGVAVILGDTAIGWKSSTQKCVTTVACEAEYVALYDTSKEALFMRAVLVFLQPELTGMRVDVFGHNEGAKAIANNPSSASRSKHIDLKLHLIRGSVCAGDVRVLDVRTAEQHADVLIKPLWRKKFMLHR 654
            +R +VG LM ++  TRP+  NA+R  ARHSH P    WKA Q+I +Y+     + LK+   + + +   V+ DAD+A+   DRR VSG  V +    + W + TQKCV+    EAEY+A+ D  KEALF+  +L FL+P     ++DVF  NEGA A+A NP S+SRSKHID++ H +R     G + V  V +  QHAD+L K L R  F +HR
Sbjct:   68 FREVVGCLMWIANNTRPETSNAVRTVARHSHEPKKSDWKAAQKILSYLKETAHLTLKYKQDTTVDVGTLVYVDADFASKATDRRSVSGALVRVAGCLVSWFAWTQKCVSLSTSEAEYIAMGDGVKEALFVNGMLQFLRPSAKPRKIDVFEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSKVQHADILTKALPRNLFEVHR 282          
BLAST of mRNA_F-serratus_M_contig115.1267.1 vs. uniprot
Match: A0A6H5JRE7_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRE7_9PHAE)

HSP 1 Score: 178 bits (452), Expect = 8.090e-51
Identity = 94/215 (43.72%), Postives = 130/215 (60.47%), Query Frame = 1
Query:   16 YRPLVGSLMRLSVTTRPDIDNALRACARHSHNPSARHWKALQQIAAYVNFLKEIGLKFVLGSCLKL--TVFADADYAAAPNDRRPVSGVAVILGDTAIGWKSSTQKCVTTVACEAEYVALYDTSKEALFMRAVLVFLQPELTGMRVDVFGHNEGAKAIANNPSSASRSKHIDLKLHLIRGSVCAGDVRVLDVRTAEQHADVLIKPLWRKKFMLHR 654
            +R +VG LM ++  TRP+  NA+R  ARHSH P    WKA Q+I +Y+     + LK+   + + +   V+ DAD+A+   DRR VSG  V++    + W S TQKCV+    EAEY+A+ D  KEA F+  +L FL+P     ++DVF  NEGA A+A NP S+SRSKHID++ H +R     G + V  V + EQHAD+L K L R  F  HR
Sbjct:  163 FREVVGCLMWIANNTRPETSNAVRTVARHSHEPKKSDWKAAQKILSYLKETAHLTLKYKQDTTVDVGTLVYVDADFASKATDRRSVSGALVLVVGCLVSWFSWTQKCVSLSTSEAEYIAMGDGVKEAFFVNGMLQFLRPSAKPRKIDVFEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSKEQHADILTKALPRNLFEFHR 377          
BLAST of mRNA_F-serratus_M_contig115.1267.1 vs. uniprot
Match: A0A6H5KZH7_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZH7_9PHAE)

HSP 1 Score: 184 bits (468), Expect = 5.500e-50
Identity = 100/215 (46.51%), Postives = 133/215 (61.86%), Query Frame = 1
Query:   16 YRPLVGSLMRLSVTTRPDIDNALRACARHSHNPSARHWKALQQIAAYVNFLKEIGLKFVLGSCLKL--TVFADADYAAAPNDRRPVSGVAVILGDTAIGWKSSTQKCVTTVACEAEYVALYDTSKEALFMRAVLVFLQPELTGMRVDVFGHNEGAKAIANNPSSASRSKHIDLKLHLIRGSVCAGDVRVLDVRTAEQHADVLIKPLWRKKFMLHR 654
            +R +VGSLM ++  TR DI NA+RA ARHSH P   HWKA Q+I  Y+     + LKF   S + +   V+ DAD+A+   DRR VSG  V +    + W S TQKCV+    EAEY+A+ D  KEALF+  +L FL+P +   ++DV   NEGA A+A NP S+SRSKHID++ H +R     G + V  V + EQHAD+L K L R  F +HR
Sbjct: 1179 FREVVGSLMWIASQTRADISNAVRAVARHSHEPKKSHWKAAQKILNYLLETAHLTLKFKRDSSVDVGTLVYVDADFASKATDRRSVSGAMVFVAAMLVVWISRTQKCVSQSTSEAEYLAMGDGVKEALFVNGMLQFLRPSVKPRKIDVLEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSKEQHADILTKALPRDLFEVHR 1393          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig115.1267.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KCG6_9PHAE1.040e-5446.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KBM6_9PHAE2.150e-5346.05Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K274_9PHAE2.960e-5345.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J8M4_9PHAE1.110e-5244.44Uncharacterized protein n=3 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JW47_9PHAE1.860e-5243.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KKK1_9PHAE9.710e-5246.98Integrase catalytic domain-containing protein n=2 ... [more]
A0A6H5JRL9_9PHAE1.330e-5146.98Integrase catalytic domain-containing protein n=2 ... [more]
A0A6H5JTP8_9PHAE7.870e-5143.26Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JRE7_9PHAE8.090e-5143.72Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KZH7_9PHAE5.500e-5046.51Uncharacterized protein n=3 Tax=Ectocarpus sp. CCA... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig115contigF-serratus_M_contig115:772482..773159 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score143.7
Seed ortholog evalue1.1e-31
Seed eggNOG ortholog5297.GMQ_02354T0
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Reverse transcriptase (RNA-dependent DNA polymerase)
EggNOG OGs2YC45@29000,38DPC@33154,3NUZ7@4751,3UY7N@5204,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelPucciniomycotina
Best eggNOG OGNA|NA|NA
Exons1
Model size678
Cds size678
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929050.5497973-CDS-F-serratus_M_contig115:772481..7731591622929050.5497973-CDS-F-serratus_M_contig115:772481..773159Fucus serratus maleCDSF-serratus_M_contig115 772482..773159 -
1690962682.828183-CDS-F-serratus_M_contig115:772481..7731591690962682.828183-CDS-F-serratus_M_contig115:772481..773159Fucus serratus maleCDSF-serratus_M_contig115 772482..773159 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig115.1267.1prot_F-serratus_M_contig115.1267.1Fucus serratus malepolypeptideF-serratus_M_contig115 772482..773159 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig115.1267.1

>prot_F-serratus_M_contig115.1267.1 ID=prot_F-serratus_M_contig115.1267.1|Name=mRNA_F-serratus_M_contig115.1267.1|organism=Fucus serratus male|type=polypeptide|length=226bp
DEFPLYRPLVGSLMRLSVTTRPDIDNALRACARHSHNPSARHWKALQQIA
AYVNFLKEIGLKFVLGSCLKLTVFADADYAAAPNDRRPVSGVAVILGDTA
IGWKSSTQKCVTTVACEAEYVALYDTSKEALFMRAVLVFLQPELTGMRVD
VFGHNEGAKAIANNPSSASRSKHIDLKLHLIRGSVCAGDVRVLDVRTAEQ
HADVLIKPLWRKKFMLHRAALMNLS*
back to top

mRNA from alignment at F-serratus_M_contig115:772482..773159-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig115.1267.1 ID=mRNA_F-serratus_M_contig115.1267.1|Name=mRNA_F-serratus_M_contig115.1267.1|organism=Fucus serratus male|type=mRNA|length=678bp|location=Sequence derived from alignment at F-serratus_M_contig115:772482..773159- (Fucus serratus male)
GATGAGTTTCCCCTGTACCGACCCCTAGTTGGTAGCCTGATGAGGCTATC AGTCACGACGAGACCGGATATCGATAATGCGTTACGTGCGTGCGCGCGCC ACAGCCATAACCCTAGTGCCCGGCACTGGAAGGCTCTACAGCAGATCGCC GCGTACGTGAATTTTTTGAAAGAGATAGGTCTGAAGTTTGTGCTTGGTTC TTGCTTGAAGCTTACTGTGTTCGCTGATGCTGATTACGCGGCGGCACCTA ATGATAGAAGGCCCGTGTCTGGTGTGGCAGTGATATTGGGGGACACAGCT ATTGGCTGGAAGAGTTCTACGCAGAAATGTGTTACGACTGTCGCATGTGA AGCCGAGTACGTTGCTCTGTATGATACATCCAAGGAAGCGCTCTTTATGA GAGCCGTGCTGGTATTCCTGCAACCTGAGCTGACCGGGATGAGGGTAGAT GTTTTCGGCCACAATGAAGGTGCGAAAGCGATCGCGAACAACCCAAGTAG CGCGTCTAGGAGTAAGCACATCGACTTGAAGCTCCATCTTATCCGAGGAT CGGTTTGCGCGGGGGACGTTCGTGTCTTGGACGTGAGGACAGCGGAGCAA CATGCAGATGTGCTAATAAAACCCTTGTGGAGGAAGAAATTTATGTTGCA CCGCGCGGCTTTGATGAATCTCTCTTGA
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig115:772482..773159-

>mRNA_F-serratus_M_contig115.1267.1 ID=mRNA_F-serratus_M_contig115.1267.1|Name=mRNA_F-serratus_M_contig115.1267.1|organism=Fucus serratus male|type=CDS|length=1356bp|location=Sequence derived from alignment at F-serratus_M_contig115:772482..773159- (Fucus serratus male)
GATGAGTTTCCCCTGTACCGACCCCTAGTTGGTAGCCTGATGAGGCTATC
AGTCACGACGAGACCGGATATCGATAATGCGTTACGTGCGTGCGCGCGCC
ACAGCCATAACCCTAGTGCCCGGCACTGGAAGGCTCTACAGCAGATCGCC
GCGTACGTGAATTTTTTGAAAGAGATAGGTCTGAAGTTTGTGCTTGGTTC
TTGCTTGAAGCTTACTGTGTTCGCTGATGCTGATTACGCGGCGGCACCTA
ATGATAGAAGGCCCGTGTCTGGTGTGGCAGTGATATTGGGGGACACAGCT
ATTGGCTGGAAGAGTTCTACGCAGAAATGTGTTACGACTGTCGCATGTGA
AGCCGAGTACGTTGCTCTGTATGATACATCCAAGGAAGCGCTCTTTATGA
GAGCCGTGCTGGTATTCCTGCAACCTGAGCTGACCGGGATGAGGGTAGAT
GTTTTCGGCCACAATGAAGGTGCGAAAGCGATCGCGAACAACCCAAGTAG
CGCGTCTAGGAGTAAGCACATCGACTTGAAGCTCCATCTTATCCGAGGAT
CGGTTTGCGCGGGGGACGTTCGTGTCTTGGACGTGAGGACAGCGGAGCAA
CATGCAGATGTGCTAATAAAACCCTTGTGGAGGAAGAAATTTATGTTGCA
CCGCGCGGCTTTGATGAATCTCTCTTGAGATGAGTTTCCCCTGTACCGAC
CCCTAGTTGGTAGCCTGATGAGGCTATCAGTCACGACGAGACCGGATATC
GATAATGCGTTACGTGCGTGCGCGCGCCACAGCCATAACCCTAGTGCCCG
GCACTGGAAGGCTCTACAGCAGATCGCCGCGTACGTGAATTTTTTGAAAG
AGATAGGTCTGAAGTTTGTGCTTGGTTCTTGCTTGAAGCTTACTGTGTTC
GCTGATGCTGATTACGCGGCGGCACCTAATGATAGAAGGCCCGTGTCTGG
TGTGGCAGTGATATTGGGGGACACAGCTATTGGCTGGAAGAGTTCTACGC
AGAAATGTGTTACGACTGTCGCATGTGAAGCCGAGTACGTTGCTCTGTAT
GATACATCCAAGGAAGCGCTCTTTATGAGAGCCGTGCTGGTATTCCTGCA
ACCTGAGCTGACCGGGATGAGGGTAGATGTTTTCGGCCACAATGAAGGTG
CGAAAGCGATCGCGAACAACCCAAGTAGCGCGTCTAGGAGTAAGCACATC
GACTTGAAGCTCCATCTTATCCGAGGATCGGTTTGCGCGGGGGACGTTCG
TGTCTTGGACGTGAGGACAGCGGAGCAACATGCAGATGTGCTAATAAAAC
CCTTGTGGAGGAAGAAATTTATGTTGCACCGCGCGGCTTTGATGAATCTC
TCTTGA
back to top