prot_F-serratus_M_contig114.1221.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig114.1221.1
Unique Nameprot_F-serratus_M_contig114.1221.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length1471
Homology
BLAST of mRNA_F-serratus_M_contig114.1221.1 vs. uniprot
Match: D8LBN4_ECTSI (V-SNARE coiled-coil homology domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBN4_ECTSI)

HSP 1 Score: 1047 bits (2708), Expect = 0.000e+0
Identity = 741/1536 (48.24%), Postives = 884/1536 (57.55%), Query Frame = 0
Query:    1 MVKVSGAAGVELVLEEEG-SIEGDDHLTHLLFPTHYLLVGVTLTGVVVAWNLTKARRCGNV-APPTSATGGEECVTAVHCPGPPPN---ASDASSKDRYVFLGLESGRVIVVQVLPLCRASGYMVEPHDVAAGAPEELL-APGVSRGGLGAVTSIASSLESEE----LALFGHQHGGIVLWDWIRRKRLALRGLAPDGSGVGS-------------ERDG-EVTCLAFYPDGGAFVAGFAAGCYAVFSNSSAHDSAQPPRRWICEVGDDGSCPREGPTIVRTVISSVQWVAVRVSGDQKAWGLLVAGGVEMEEGEEPDGVSLLIPSAARVLGSASAQTSRGGGKTRXXXXXXXXXXXXXXALASLETTVFVPFAIGQERLSHVHAVVMGGTGGSGQSNGRELVINSSESSDGVALSDRQDHRTDREKRLGTSEVAAGQEEPPE--ESVVVLGLVTWNEEVRAADGRLRFRRASSVQACPVQTSPFAALLQLAPGRIGGHLSGFAPVTAVASTPLLSSSTILDFATSLGAARNAEFG----SAQVSKLLRGGGLKWADGVPARARDEALGTSEMLIAGHSDGRVTLWECCGPAPREDGVSISSGRVQTLEIPSGAAFLGALNVSELKGDVDEDGGVPVTALDAWVERDHVAEAE------RNACWVAVGFASGEASVFILSSRMDTN------GDAQGSGCTGVGRGEINPVGLTPLASRPIEVSEVQLSESAM-GDTSERGGPW-----KKFTRGRVGREAFAHASEGDAEVEDLELEAAIAKARADARAIEESGELNEVGEFALAKKNGAGEREQDGRTEXXXXXXXXXXXXQETEKGGEDDGRE----DEKTILRQELSEAMADEGAWGTASGSP-PPQPVVDGAPESENHEEEEWEGKRKIESVARKASLVQLALRLHSHPVRCVALSFDTVGSALTLIVADAEGVVSVTDVSTGSASLLPMRAPRVRPCLPSIVIGPLPRALLRGSAAQTSQRGRQLGAAGALFVLLDGWLNVFDLASRDPVDVAQVPGFARNNSSGSG--------GGVDRDGVDTTATRTAVGAPRDGPERT-WLFCIDEHGLPLVPYASEPLSLFDPNPPHVGVGEADLEGT-VDAENDGLGSAAARTIWVTPPPSSTALDSHHEHELQAMSDAPTPRSFLLAVRGDVAVLMAAEEGQGSALP---FSRRSPVDGPDFAAFKGRSGAELVVKARLELPAAEGRVIIPRVDGAGVCMVPAGGGGEGRKAGSRGCLVATDTTGFVTALLLPSLSPVFRDRLPVPSRGGSFQPGNTEMSQKSVCNLVGELTVQGAAGELTRWSLLTDGAYSRLMISKPRLIKVSMLVRLALPMERPLAGQPGDGAAEDDQRVPHPRGRPSRGVLGRFSLGGSKKRIADVFAVEPSLGPTIRRQSSEESAHLAPSGHSASIRKGRGSGDGDDEATTQRHALFGERESGGGRAAGATSATARATDGVGGTFEALSEARDLAVERGEKLANMVDASRQLEDSAMAFGDMAKQLRRQQEKDECCVS 1470
            +VKV G  GVELVLEEEG S+ G+D  +HLLF T  LLVGVT TG V+ W+L    R G++ +PP  ATG +E VT+VH  G       ASDA  ++RYVFLG ESGRV V QV P+ R SGY VEP + + GAP+ELL APG S   LGAVT+IAS  + +       +FGH+ GGIV+WDW+RRKRLALR L   G   G              +R+G EVT LA +P G AF AGFAAGCYAVFS SS+      P RW+ EVGDDGSCPREGPTIVRT +S V+WV VR +G  +  GL+VAGGVE+EEGEEPDGVSLL+PS+  V           G    XXXXXXXXXX    A A+LET VFVPFA+GQERLSHVH V + GTG   +   R    +S + S+   +  + +            + AA QE+  E  E +VVLGLV WNEE    DGRL FR ASS+QACP+QTSP+ ALLQLAP R G HLSGFA VTAVASTPLLSSSTILDF T LGA +  E G        S LLRGG L+W D VP+R RDEALGTSE+L+AGHSDG ++ WECCGPA R+D V +S GRV   E+PSG   LG++  + L    +  G   VTALD WVERDHVA A       RNACWVAVG  SG+A V +LS+RM+            G GC   G G     G TPLA +P+EVS+V+L +    GD S +G        K+F +   G++      EG   +ED ELEAAIA+ARA+ARAI    E  E          GA E       E            +    GGE + +E    +E   LRQELSEAMADEGAW  +  SP P +P    APE+E  EEE    K +++    KASL+QLALRLHSH VRCVALSFD  GSAL L+VAD  GVVSVTDVSTGSASLLPMR P+ RPC PS+ IGP+P AL   S  QT + G    A+GALFVLL+GWLNVFDLASRDPVD  QVPG A  +              G+  D    +A RT     R+  E T WL C+D+HGLPL PYASEP S     PP       + +G  +D E+  + S    TIWV+P PS TALD +HEHELQ +SD P P   LL VRG  AV++A        +    F+RR  V  PD A FKGRSGAELVV++R  LP A    + P +DGAGVC+V A GG EG +A +             +   +PS S          SR   +Q                    Q + G+              L  S                                       RGR ++G+LGR SLGGSKK IADVFAVEPSL        S  +                           QR ALFG+RE+G G   G TSA   A  GV G   A SEARDLA+ERGEKL N+VD SRQLEDSAMAFGDMAKQLR+QQE + CC+S
Sbjct:   73 LVKVFGGPGVELVLEEEGASVAGEDPPSHLLFATPSLLVGVTATGAVLVWDLAAGGRGGSIPSPPDPATGLDERVTSVHSHGXXXXXXLASDAH-EERYVFLGFESGRVRVAQVFPVYRESGYTVEPQNTSHGAPDELLQAPGKS---LGAVTAIASFGDRDGGGGGFGIFGHRCGGIVVWDWVRRKRLALRSL---GKSQGKKEXXXXXXXXDFEDREGREVTSLALHPSGEAFAAGFAAGCYAVFSVSSSPSHETGPPRWVREVGDDGSCPREGPTIVRTAVSLVRWVRVRGAGAGRTSGLVVAGGVEIEEGEEPDGVSLLVPSSEAV--------GARGXXXXXXXXXXXXXXVVTAAKAALETAVFVPFAMGQERLSHVHCV-LSGTGAPTREPRRAGTRSSGDLSEDARVGGKDE-----------PDSAAAQEDEVEVAEELVVLGLVKWNEEFLGDDGRLHFRLASSIQACPIQTSPYVALLQLAPERFGPHLSGFATVTAVASTPLLSSSTILDFMTCLGAEQVQEEGRNGSQTTASPLLRGGYLRWPDSVPSRRRDEALGTSELLVAGHSDGSLSFWECCGPASRQDAVCLSEGRVVMREVPSGTVLLGSVPAAGLGSPEEGAGNAAVTALDVWVERDHVAAAAGAAAAGRNACWVAVGLESGDARVIVLSNRMEAGCSNPEFPSGSGGGCK-AGSG-----GGTPLAEKPVEVSDVKLGDDGTTGDDSTKGSSGGGRLLKRFLKRGTGQQPSPGDEEGA--MEDTELEAAIAEARAEARAIAALEESRE----------GAPEN-----AETPEPRGTVDDARKRESVGGEGEAQETDDHEESDHLRQELSEAMADEGAWSGSVMSPLPKRPPPKHAPEAEKGEEE----KLRLDEPP-KASLIQLALRLHSHAVRCVALSFDARGSALVLVVADEAGVVSVTDVSTGSASLLPMRVPQSRPCRPSVTIGPMPSAL---SGGQTPEPG----ASGALFVLLEGWLNVFDLASRDPVDFVQVPGLAPPSDDSXXXXXXXXXRAGIREDDFAGSAGRTRS---RERSEETPWLACVDKHGLPLQPYASEPFSSSFSPPPRKDHAGTEADGVKLDPEDAPVHS---HTIWVSPVPSRTALDDYHEHELQVLSDTPPPEPLLLVVRGATAVVLAISRRDADGVTSSVFARRGSVS-PDAATFKGRSGAELVVRSRGTLPPARRSAVPPTIDGAGVCLVAAAGG-EGLEAATMPDCEEARRRWRRSPCAIPSGS----------SRSKGWQG-------------------QSSTGDXXXXXXXXXXXXXXLSSS---------------------------------------RGRSAKGMLGRLSLGGSKKNIADVFAVEPSLRQDSIGGGSGSTRSXXXXXXXXXXXXXXXXXXXXQTEQHQRDALFGQREAGAG-GGGETSAVGGARGGVSGAHAAASEARDLAIERGEKLENLVDRSRQLEDSAMAFGDMAKQLRKQQEDEACCIS 1469          
BLAST of mRNA_F-serratus_M_contig114.1221.1 vs. uniprot
Match: A0A6H5K0L8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0L8_9PHAE)

HSP 1 Score: 981 bits (2537), Expect = 0.000e+0
Identity = 646/1264 (51.11%), Postives = 774/1264 (61.23%), Query Frame = 0
Query:    1 MVKVSGAAGVELVLEEEG-SIEGDDHLTHLLFPTHYLLVGVTLTGVVVAWNLTKARRCGNV-APPTSATGGEECVTAVHCPGPPPNASDASS--KDRYVFLGLESGRVIVVQVLPLCRASGYMVEPHDVAAGAPEELL-APGVSRGGLGAVTSIASSLESEE---LALFGHQHGGIVLWDWIRRKRLALRGLAP------------DGSGVGSERDGEVTCLAFYPDGGAFVAGFAAGCYAVFSNSSAHDSAQPPRRWICEVGDDGSCPREGPTIVRTVISSVQWVAVRVSGDQKAWGLLVAGGVEMEEGEEPDGVSLLIPSAARVLGSASAQTSRGGGKTRXXXXXXXXXXXXXXALASLETTVFVPFAIGQERLSHVHAVVMGGTGGSGQSNGRELVINSSESSDGVALSDRQDHRTDREKRLGTSEVAAGQEEPPE--ESVVVLGLVTWNEEVRAADGRLRFRRASSVQACPVQTSPFAALLQLAPGRIGGHLSGFAPVTAVASTPLLSSSTILDFATSLGAARNAEFGS----AQVSKLLRGGGLKWADGVPARARDEALGTSEMLIAGHSDGRVTLWECCGPAPREDGVSISSGRVQTLEIPSGAAFLGALNVSELKGDVDEDGGVPVTALDAWVERDHVAEAE---RNACWVAVGFASGEASVFILSSRMDTNGDAQGSGCTGVGRGEINPVGLTPLASRPIEVSEVQLSESAM-GDTSERGGPW-----KKFTRGRVGREAFAHASEGDAEVEDLELEAAIAKARADARAI---EESGELNEVGEFALAKKNGAGEREQDGRTEXXXXXXXXXXXXQETEKGGEDDGREDEKTILRQELSEAMADEGAW-GTASGSPPPQPVVDGAPESENHEEEEWEGKRKIESVARKASLVQLALRLHSHPVRCVALSFDTVGSALTLIVADAEGVVSVTDVSTGSASLLPMRAPRVRPCLPSIVIGPLPRALLRGSAAQTSQRGRQLGAAGALFVLLDGWLNVFDLASRDPVDVAQVPGFARNNSSGSG---------GGVDRDGVDTTATRTAVGAPRDGPERTWLFCIDEHGLPLVPYASEPLSLFDPNPPHVGVGEADLEG-TVDAENDGLGSAAARTIWVTPPPSSTALDSHHEHELQAMSDAPTPRSFLLAVRGDVAVLMAAEEGQGSALP---FSRRSPVDGPDFAAFKGRSGAELVVKARLELPAAEGRVIIPRVDGAGVCMVPAGGG-GEGRKAGSRGCLVATDTTGFVTALLLPS 1211
            +VKV G  GVELVLEEEG S+ G+D  +HLLF T  LLVGVT TG V+ W+L    R G++ +PP   TG +E VT+VH  G       AS   K+RYVFLG ESGRV V QV P+CR SGY VEP + + GAP+ELL APG S   LGAVT+IAS  + +      +FGH+ GGIV+WDW+RRKRLALR L              +      ++  EVT LA +P G AF AGFAAGCYAVFS SS+        RW+ EVGDDGSCPREGPTIVRT +S VQWV VR +G  +  GL+VAGGVE+EEGEEPDGVSLL+ S   V          G     XXXXXXXXX     A A+LET VFVPFA+GQERLSHVH V + G G   Q        +S + S+  ++  + +            E AA QE+  E  E +VVLGLV WNEE    DGRL FR ASS+QACP++TSP+ ALLQLAP R G HLSGFA VTAVA TPLLSSSTILDF T LGA +  E G          LLRGG L+W D VP+R RDEALGTSE+L+AGHSDG ++ WECCGPA R+D V +S GRV   E+PSGA  LG++  + L    +  G   VTALD WVERDHVA A    RNACWVAVG  SG+A V +LS+RM+    +    C   G  +    G TPLA +P+EVS+V+L +    GD S +G        K+F +   G++      EG   +ED ELEAAIA+ARA+ARAI   EES E    G    A+  GA   +   R              QET+  GE D        LRQELSEAMADEGAW G+     P +P     PE+E  EEE    K  ++    KASL+QLALRLHSH VRCVALSFD  GSAL L+VAD  GVVSVTDVSTGSASLLPMR P+ RPC PS+ IGP+P AL  G+A +        GA+GALFVLL+GWLNVFDLASRDPVD  QVPG A  +               G+  D    +A RT   +   G E  WL C+D  GLPL+PYASEP S     PP       D +G  +D E+  + S    TIWV+P PS TALD +HEHELQ +SD P P   LL VRG  AV++A        +    F+RR  V  PD A FKGRSGAELVV++R  LP A    + P +DG GVCMV A GG G  R+AG RGCL+A D++GFVTA  +P+
Sbjct:  102 LVKVFGGPGVELVLEEEGASVAGEDPPSHLLFATPSLLVGVTATGAVLVWDLAAGGRGGSIPSPPDPVTGLDERVTSVHAHGGGDGGGPASDAHKERYVFLGFESGRVRVAQVFPVCRESGYTVEPQNTSHGAPDELLQAPGKS---LGAVTAIASFGDRDGCGGFGIFGHRCGGIVVWDWVRRKRLALRSLGKSQGKKEXXXXXYEEENFEDQKGHEVTSLALHPSGEAFAAGFAAGCYAVFSVSSSPSHEADLPRWVREVGDDGSCPREGPTIVRTAVSLVQWVRVRGAGVGRTSGLVVAGGVEIEEGEEPDGVSLLVLSTEAV----------GARGXXXXXXXXXXXDVVTAAKAALETAVFVPFAMGQERLSHVHCV-LSGAGAPTQEPHWAGTRSSGDLSEDASVDGKDE-----------PEPAAAQEDEVEVVEELVVLGLVKWNEEFLGDDGRLHFRLASSIQACPIRTSPYVALLQLAPERFGPHLSGFATVTAVACTPLLSSSTILDFMTCLGAEQAEEEGQNGSQTTAPPLLRGGYLRWPDSVPSRRRDEALGTSELLVAGHSDGSLSFWECCGPASRQDAVCLSEGRVVMREVPSGAVLLGSVPAAGLGSPEEGAGNAAVTALDVWVERDHVAAAVPAGRNACWVAVGLESGDARVIVLSNRMEAGSSSPDFPCGSGGSSKARSGGGTPLAEKPVEVSDVKLGDDGTTGDASAKGSSGGGRLLKRFLKRGAGQQPSLGDEEGA--MEDTELEAAIAQARAEARAIVALEESRE-GAPGNAETAEPRGAAVDDARKRESVGGEGEA-----QETDDQGESDH-------LRQELSEAMADEGAWSGSVMPPSPKRPPTKHTPEAETGEEE----KLPLDEPP-KASLIQLALRLHSHAVRCVALSFDARGSALALVVADEAGVVSVTDVSTGSASLLPMRVPQSRPCRPSVTIGPMPSALSGGAAPKP-------GASGALFVLLEGWLNVFDLASRDPVDFVQVPGLAPPSDXXXXXXXXXXXXRAGIREDDFAGSAGRTR--SRERGEETPWLACVDNRGLPLLPYASEPFSSSFSPPPREDDASTDADGGKIDPEDAPVHS---HTIWVSPVPSRTALDDYHEHELQVLSDTPPPEPLLLVVRGATAVVLAISRRDADGVTSSVFARRGSVS-PDAATFKGRSGAELVVRSRGTLPPAGRSAVPPTIDGVGVCMVAAAGGRGLEREAGRRGCLIAADSSGFVTAATMPN 1307          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig114.1221.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LBN4_ECTSI0.000e+048.24V-SNARE coiled-coil homology domain-containing pro... [more]
A0A6H5K0L8_9PHAE0.000e+051.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 771..791
NoneNo IPR availableGENE3D1.20.5.110coord: 1401..1462
e-value: 7.3E-9
score: 37.5
NoneNo IPR availablePANTHERPTHR10241:SF25TOMOSYN, ISOFORM Ccoord: 1193..1460
NoneNo IPR availablePANTHERPTHR10241LETHAL 2 GIANT LARVAE PROTEINcoord: 2..229
NoneNo IPR availablePANTHERPTHR10241:SF25TOMOSYN, ISOFORM Ccoord: 2..229
NoneNo IPR availablePANTHERPTHR10241LETHAL 2 GIANT LARVAE PROTEINcoord: 1193..1460
NoneNo IPR availableSUPERFAMILY58038SNARE fusion complexcoord: 1411..1461
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 15..243
e-value: 3.2E-6
score: 28.1
IPR001388SynaptobrevinPROSITEPS50892V_SNAREcoord: 1405..1465
score: 9.121
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 35..906

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig114contigF-serratus_M_contig114:657048..661654 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig114.1221.1mRNA_F-serratus_M_contig114.1221.1Fucus serratus malemRNAF-serratus_M_contig114 656958..662058 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig114.1221.1 ID=prot_F-serratus_M_contig114.1221.1|Name=mRNA_F-serratus_M_contig114.1221.1|organism=Fucus serratus male|type=polypeptide|length=1471bp
MVKVSGAAGVELVLEEEGSIEGDDHLTHLLFPTHYLLVGVTLTGVVVAWN
LTKARRCGNVAPPTSATGGEECVTAVHCPGPPPNASDASSKDRYVFLGLE
SGRVIVVQVLPLCRASGYMVEPHDVAAGAPEELLAPGVSRGGLGAVTSIA
SSLESEELALFGHQHGGIVLWDWIRRKRLALRGLAPDGSGVGSERDGEVT
CLAFYPDGGAFVAGFAAGCYAVFSNSSAHDSAQPPRRWICEVGDDGSCPR
EGPTIVRTVISSVQWVAVRVSGDQKAWGLLVAGGVEMEEGEEPDGVSLLI
PSAARVLGSASAQTSRGGGKTRSKDKDKVLSSSSSSALASLETTVFVPFA
IGQERLSHVHAVVMGGTGGSGQSNGRELVINSSESSDGVALSDRQDHRTD
REKRLGTSEVAAGQEEPPEESVVVLGLVTWNEEVRAADGRLRFRRASSVQ
ACPVQTSPFAALLQLAPGRIGGHLSGFAPVTAVASTPLLSSSTILDFATS
LGAARNAEFGSAQVSKLLRGGGLKWADGVPARARDEALGTSEMLIAGHSD
GRVTLWECCGPAPREDGVSISSGRVQTLEIPSGAAFLGALNVSELKGDVD
EDGGVPVTALDAWVERDHVAEAERNACWVAVGFASGEASVFILSSRMDTN
GDAQGSGCTGVGRGEINPVGLTPLASRPIEVSEVQLSESAMGDTSERGGP
WKKFTRGRVGREAFAHASEGDAEVEDLELEAAIAKARADARAIEESGELN
EVGEFALAKKNGAGEREQDGRTEEEQEFKEEEEETQETEKGGEDDGREDE
KTILRQELSEAMADEGAWGTASGSPPPQPVVDGAPESENHEEEEWEGKRK
IESVARKASLVQLALRLHSHPVRCVALSFDTVGSALTLIVADAEGVVSVT
DVSTGSASLLPMRAPRVRPCLPSIVIGPLPRALLRGSAAQTSQRGRQLGA
AGALFVLLDGWLNVFDLASRDPVDVAQVPGFARNNSSGSGGGVDRDGVDT
TATRTAVGAPRDGPERTWLFCIDEHGLPLVPYASEPLSLFDPNPPHVGVG
EADLEGTVDAENDGLGSAAARTIWVTPPPSSTALDSHHEHELQAMSDAPT
PRSFLLAVRGDVAVLMAAEEGQGSALPFSRRSPVDGPDFAAFKGRSGAEL
VVKARLELPAAEGRVIIPRVDGAGVCMVPAGGGGEGRKAGSRGCLVATDT
TGFVTALLLPSLSPVFRDRLPVPSRGGSFQPGNTEMSQKSVCNLVGELTV
QGAAGELTRWSLLTDGAYSRLMISKPRLIKVSMLVRLALPMERPLAGQPG
DGAAEDDQRVPHPRGRPSRGVLGRFSLGGSKKRIADVFAVEPSLGPTIRR
QSSEESAHLAPSGHSASIRKGRGSGDGDDEATTQRHALFGERESGGGRAA
GATSATARATDGVGGTFEALSEARDLAVERGEKLANMVDASRQLEDSAMA
FGDMAKQLRRQQEKDECCVS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR001388Synaptobrevin
IPR036322WD40_repeat_dom_sf