mRNA_F-serratus_M_contig1128.1154.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1128.1154.1 vs. uniprot
Match: A0A6H5L2A1_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2A1_9PHAE) HSP 1 Score: 176 bits (445), Expect = 4.590e-47 Identity = 87/129 (67.44%), Postives = 100/129 (77.52%), Query Frame = 1
Query: 1 YDESALIEAQILRDVNDREIDDRGGPNDACLCVMMFDHFEHQRHCCLVFECLGPSLHESLMKNSRRGFPLNVIRPIALELLRAIEFLHPMKLIHTDLKPENILLTSWDEREVKLDSGDVIRVPATPHIK 387
Y ESALIEAQILRDVN RE R D LCV MF FEHQ HCCLVFECLG SL++ L KN RGFP++V+R I+ ELL+A+EFLH +KLIHTDLKPEN+LL SW++R V L+SGDVIRVP P IK
Sbjct: 459 YHESALIEAQILRDVNLRERSTRRNTIDTSLCVEMFAQFEHQGHCCLVFECLGRSLYDYLKKNDYRGFPIDVLRSISRELLQAVEFLHSIKLIHTDLKPENVLLKSWEDRSVTLESGDVIRVPVNPRIK 587
BLAST of mRNA_F-serratus_M_contig1128.1154.1 vs. uniprot
Match: D7FR38_ECTSI (AFC2 (ARABIDOPSIS FUS3-COMPLEMENTING GENE 1) kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR38_ECTSI) HSP 1 Score: 155 bits (391), Expect = 6.270e-42 Identity = 81/129 (62.79%), Postives = 94/129 (72.87%), Query Frame = 1
Query: 1 YDESALIEAQILRDVNDREIDDRGGPNDACLCVMMFDHFEHQRHCCLVFECLGPSLHESLMKNSRRGFPLNVIRPIALELLRAIEFLHPMKLIHTDLKPENILLTSWDEREVKLDSGDVIRVPATPHIK 387
Y ESALIEAQILRDVN RE R D LCV MF FEHQ ECLG SL++ L KN RGFP++V+R I+ ELL+A+EFLH +KLIHTDLKPEN+LL SW++R V L+SGDVIRVP P IK
Sbjct: 57 YHESALIEAQILRDVNFRERSTRRNTIDTSLCVEMFAQFEHQ-----CSECLGRSLYDFLKKNDYRGFPIDVLRSISRELLQAVEFLHSIKLIHTDLKPENVLLKSWEDRSVTLESGDVIRVPVNPRIK 180
BLAST of mRNA_F-serratus_M_contig1128.1154.1 vs. uniprot
Match: A0A835Z1U5_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1U5_9STRA) HSP 1 Score: 125 bits (313), Expect = 2.130e-29 Identity = 67/132 (50.76%), Postives = 83/132 (62.88%), Query Frame = 1
Query: 1 YDESALIEAQILRDVNDREIDDRGGPNDACLCVMMFDHFEHQRHCCLVFECLGPSLHESLMKNSRRGFPLNVIRPIALELLRAIEFLHPMKLIHTDLKPENILLTSWD---EREVKLDSGDVIRVPATPHIK 387
Y ESALIEA ILRDVN R G A LCV + D F+ + HCCLVFE +GPSL++ L +N RGFPL +R A +LL A+ FLH M L+HTDLKPEN+LL + ER D D + +P + IK
Sbjct: 225 YHESALIEADILRDVN------RAGGAGAALCVRLLDQFDARGHCCLVFERMGPSLYDVLKRNDYRGFPLRYVRDFARQLLEAVAFLHSMGLVHTDLKPENVLLCDLELEPERGRYKDDQDALMLPVSTRIK 350
BLAST of mRNA_F-serratus_M_contig1128.1154.1 vs. uniprot
Match: A0A7S3QFB1_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QFB1_9STRA) HSP 1 Score: 118 bits (295), Expect = 1.400e-26 Identity = 64/130 (49.23%), Postives = 84/130 (64.62%), Query Frame = 1
Query: 1 YDESALIEAQILRDVNDREIDDRGGPNDACLCVMMFDHFEHQR-HCCLVFECLGPSLHESLMKNSRRGFPLNVIRPIALELLRAIEFLHPMKLIHTDLKPENILLTSWDEREVKLDSGDVIRVPATPHIK 387
Y ESALIEA IL+DVN R G LCV+M HF+ QR HCCLVFECLG SL++ + + + FPL +R A ++L A++F+H LIHTDLKPENI+L S ER + + G ++PA+ IK
Sbjct: 663 YHESALIEADILKDVN------RRGGRGRSLCVVMLRHFDLQRGHCCLVFECLGRSLYDFMKTHGFKPFPLFCVRDFARQILDALDFIHSFGLIHTDLKPENIMLVSNKERSYRCNDGSDQQIPASTCIK 786
BLAST of mRNA_F-serratus_M_contig1128.1154.1 vs. uniprot
Match: A0A7S2H0F0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2H0F0_9STRA) HSP 1 Score: 105 bits (263), Expect = 9.270e-25 Identity = 47/77 (61.04%), Postives = 61/77 (79.22%), Query Frame = 3
Query: 510 YENGPQASIVATRPYRAPEVILGMRWSYPSDLWSIGCIIAELVLGDRLFETYDDHEHLALREKCVGPFPSAMLTKAP 740
Y++ ++S+V TR YRAPEVILG+ WS PSDLWS GCIIAEL +G+ LF T+D+ EHLAL E+ +GPFP ML ++P
Sbjct: 58 YDHEKKSSVVNTRQYRAPEVILGLGWSTPSDLWSAGCIIAELYMGELLFATHDNAEHLALMERAIGPFPHNMLRRSP 134
BLAST of mRNA_F-serratus_M_contig1128.1154.1 vs. uniprot
Match: A0A662WSC8_9STRA (Protein kinase domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WSC8_9STRA) HSP 1 Score: 111 bits (278), Expect = 1.800e-24 Identity = 48/78 (61.54%), Postives = 64/78 (82.05%), Query Frame = 3
Query: 510 YENGPQASIVATRPYRAPEVILGMRWSYPSDLWSIGCIIAELVLGDRLFETYDDHEHLALREKCVGPFPSAMLTKAPR 743
YE+ ++SI+ TR YR+PEVILG+ WSYPSD+WS GCIIAEL LG+ LF T+++ EHLAL E+C+GP PS M+ +AP+
Sbjct: 404 YEDESKSSIINTRQYRSPEVILGLGWSYPSDIWSAGCIIAELYLGELLFATHENMEHLALIERCIGPLPSGMVAEAPK 481
BLAST of mRNA_F-serratus_M_contig1128.1154.1 vs. uniprot
Match: UPI0008FFB066 (serine/threonine-protein kinase AFC3 isoform X4 n=1 Tax=Vitis vinifera TaxID=29760 RepID=UPI0008FFB066) HSP 1 Score: 104 bits (259), Expect = 1.050e-23 Identity = 48/97 (49.48%), Postives = 67/97 (69.07%), Query Frame = 3
Query: 465 FCCLRHSDRLRQCH----VYENGPQASIVATRPYRAPEVILGMRWSYPSDLWSIGCIIAELVLGDRLFETYDDHEHLALREKCVGPFPSAMLTKAPR 743
F CL S ++ Y+N +SIV+TR YRAPEVILG+ WSYP DLWS+GCI+ EL +G+ LF+T+++ EHLA+ E+ +GP P M+ +A R
Sbjct: 42 FRCLPKSSAIKLIDFGSTAYDNQNHSSIVSTRHYRAPEVILGLGWSYPCDLWSVGCILVELCVGEALFQTHENLEHLAMMERVLGPLPEHMIRRASR 138
BLAST of mRNA_F-serratus_M_contig1128.1154.1 vs. uniprot
Match: A0A1P8B6P6_ARATH (LAMMER-type protein kinase AFC2 n=9 Tax=Brassicales TaxID=3699 RepID=A0A1P8B6P6_ARATH) HSP 1 Score: 103 bits (258), Expect = 1.620e-23 Identity = 46/78 (58.97%), Postives = 58/78 (74.36%), Query Frame = 3
Query: 510 YENGPQASIVATRPYRAPEVILGMRWSYPSDLWSIGCIIAELVLGDRLFETYDDHEHLALREKCVGPFPSAMLTKAPR 743
YE Q IV+TR YRAPEVILG+ WSYP D+WS+GCII EL G+ LF+T+++ EHLA+ E+ +GPFP ML K R
Sbjct: 66 YERQDQTYIVSTRHYRAPEVILGLGWSYPCDVWSVGCIIVELCTGEALFQTHENLEHLAMMERVLGPFPQQMLKKVDR 143
BLAST of mRNA_F-serratus_M_contig1128.1154.1 vs. uniprot
Match: A0A5B7AUK7_DAVIN (Putative Kinase superfamily protein (Fragment) n=2 Tax=Davidia involucrata TaxID=16924 RepID=A0A5B7AUK7_DAVIN) HSP 1 Score: 104 bits (260), Expect = 2.020e-23 Identity = 49/97 (50.52%), Postives = 67/97 (69.07%), Query Frame = 3
Query: 465 FCCLRHSDRLRQCH----VYENGPQASIVATRPYRAPEVILGMRWSYPSDLWSIGCIIAELVLGDRLFETYDDHEHLALREKCVGPFPSAMLTKAPR 743
F CL S ++ ++N +SIV+TR YRAPEVILG+ W+YP DLWSIGCI+ EL LG+ LF+T+D+ EHLA+ E+ +GP P M+ +A R
Sbjct: 85 FRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWTYPCDLWSIGCILVELCLGEALFQTHDNLEHLAMMERVLGPLPEHMICRASR 181
BLAST of mRNA_F-serratus_M_contig1128.1154.1 vs. uniprot
Match: A0A484N5T7_9ASTE (Protein kinase domain-containing protein n=1 Tax=Cuscuta campestris TaxID=132261 RepID=A0A484N5T7_9ASTE) HSP 1 Score: 103 bits (257), Expect = 2.120e-23 Identity = 44/78 (56.41%), Postives = 61/78 (78.21%), Query Frame = 3
Query: 510 YENGPQASIVATRPYRAPEVILGMRWSYPSDLWSIGCIIAELVLGDRLFETYDDHEHLALREKCVGPFPSAMLTKAPR 743
Y+N Q+ IV+TR YRAPEVILG+ W+YP D+WS+GCI+ EL G+ LF+T+++ EHLA+ EK +GP PS+ML + R
Sbjct: 60 YDNDNQSYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCSGEALFQTHENLEHLAMMEKVLGPMPSSMLKRVDR 137 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1128.1154.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1128.1154.1 >prot_F-serratus_M_contig1128.1154.1 ID=prot_F-serratus_M_contig1128.1154.1|Name=mRNA_F-serratus_M_contig1128.1154.1|organism=Fucus serratus male|type=polypeptide|length=197bp MMFDHFEHQRHCCLVFECLGPSLHESLMKNSRRGFPLNVIRPIALELLRAback to top mRNA from alignment at F-serratus_M_contig1128:265787..267756- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1128.1154.1 ID=mRNA_F-serratus_M_contig1128.1154.1|Name=mRNA_F-serratus_M_contig1128.1154.1|organism=Fucus serratus male|type=mRNA|length=1970bp|location=Sequence derived from alignment at F-serratus_M_contig1128:265787..267756- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1128:265787..267756- >mRNA_F-serratus_M_contig1128.1154.1 ID=mRNA_F-serratus_M_contig1128.1154.1|Name=mRNA_F-serratus_M_contig1128.1154.1|organism=Fucus serratus male|type=CDS|length=1182bp|location=Sequence derived from alignment at F-serratus_M_contig1128:265787..267756- (Fucus serratus male)back to top |