prot_F-serratus_M_contig1123.1135.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1123.1135.1
Unique Nameprot_F-serratus_M_contig1123.1135.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length138
Homology
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BLAST of mRNA_F-serratus_M_contig1123.1135.1 vs. uniprot
Match: D7FVQ5_ECTSI (Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVQ5_ECTSI)

HSP 1 Score: 227 bits (578), Expect = 7.770e-74
Identity = 126/133 (94.74%), Postives = 128/133 (96.24%), Query Frame = 0 
Query:    7 GKGKGGRGDKKSTSKSSKAGLQFPVARIGRYLKRGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKSGPGKAKSSAS--QDY 137
            GKGKGGRG KKSTSKSSKAGLQFPVARIGRYLKRGKYA+RVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKS  GKAK+SAS  QDY
Sbjct:   54 GKGKGGRG-KKSTSKSSKAGLQFPVARIGRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKSSVGKAKASASASQDY 185
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BLAST of mRNA_F-serratus_M_contig1123.1135.1 vs. uniprot
Match: A0A6H5KG79_9PHAE (Histone H2A n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG79_9PHAE)

HSP 1 Score: 225 bits (573), Expect = 8.550e-74
Identity = 125/134 (93.28%), Postives = 127/134 (94.78%), Query Frame = 0 
Query:    7 GKGKGGRGDKKSTSKSSKAGLQFPVARIGRYLKRGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKS---GPGKAKSSASQDY 137
            GKGKGGRG KKSTSKSSKAGLQFPVARIGRYLKRGKYA+RVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKS   G  KA +SASQDY
Sbjct:    3 GKGKGGRG-KKSTSKSSKAGLQFPVARIGRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKSSVGGKAKASASASQDY 135
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BLAST of mRNA_F-serratus_M_contig1123.1135.1 vs. uniprot
Match: A0A7S2CIK1_9STRA (Histone H2A n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CIK1_9STRA)

HSP 1 Score: 206 bits (524), Expect = 2.590e-66
Identity = 113/134 (84.33%), Postives = 120/134 (89.55%), Query Frame = 0 
Query:    7 GKGKGGRGDK--KSTSKSSKAGLQFPVARIGRYLKRGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKSGPGK-AKSSASQDY 137
            GKGK GRG    K TSKSSKAGLQFPVAR+GRYLK+GK+A+RVGAGAPVYLAAVLEYL AE+LELAGNAARDNKK RI PRHIQLAVRNDEELNKLLG VTI+SGGVLPNIHAVLLPKK+G  K AK SASQDY
Sbjct:    3 GKGKSGRGKTGGKVTSKSSKAGLQFPVARVGRYLKKGKFATRVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKTRITPRHIQLAVRNDEELNKLLGNVTISSGGVLPNIHAVLLPKKTGKAKLAKGSASQDY 136
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BLAST of mRNA_F-serratus_M_contig1123.1135.1 vs. uniprot
Match: B7FWQ2_PHATC (Histone H2A n=9 Tax=Bacillariophyta TaxID=2836 RepID=B7FWQ2_PHATC)

HSP 1 Score: 205 bits (522), Expect = 3.770e-66
Identity = 108/128 (84.38%), Postives = 120/128 (93.75%), Query Frame = 0 
Query:    1 MSGKAGGKGKGGRGDKKSTSKSSKAGLQFPVARIGRYLKRGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKSGPGK 128
            MSGK  GKGKGGRGDKKST+ S+KAGLQFPV RIGRYL++GKYA+R+GAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RI+PRHI LAV+NDEELNKLLG VTIA+GGVLPNIHA+LLPKKSGP K
Sbjct:    1 MSGK--GKGKGGRGDKKSTTASAKAGLQFPVGRIGRYLRQGKYATRMGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHITLAVKNDEELNKLLGGVTIAAGGVLPNIHAILLPKKSGPTK 126
[Close]
BLAST of mRNA_F-serratus_M_contig1123.1135.1 vs. uniprot
Match: D7FWI9_ECTSI (Histone H2A n=6 Tax=Ectocarpus TaxID=2879 RepID=D7FWI9_ECTSI)

HSP 1 Score: 205 bits (521), Expect = 4.710e-66
Identity = 109/118 (92.37%), Postives = 116/118 (98.31%), Query Frame = 0 
Query:    7 GKGKGGRGDKKSTSKSSKAGLQFPVARIGRYLKRGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKS 124
            GKGKGGRG KKST++S+KAGLQFPV R+GR+LK+GKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK+
Sbjct:    3 GKGKGGRG-KKSTTRSAKAGLQFPVGRVGRFLKKGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKT 119
[Close]
BLAST of mRNA_F-serratus_M_contig1123.1135.1 vs. uniprot
Match: D7G193_ECTSI (Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G193_ECTSI)

HSP 1 Score: 205 bits (521), Expect = 2.740e-65
Identity = 109/118 (92.37%), Postives = 116/118 (98.31%), Query Frame = 0 
Query:    7 GKGKGGRGDKKSTSKSSKAGLQFPVARIGRYLKRGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKS 124
            GKGKGGRG KKST++S+KAGLQFPV R+GR+LK+GKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK+
Sbjct:   48 GKGKGGRG-KKSTTRSAKAGLQFPVGRVGRFLKKGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKT 164
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BLAST of mRNA_F-serratus_M_contig1123.1135.1 vs. uniprot
Match: A0A835ZLE9_9STRA (Histone H2A n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLE9_9STRA)

HSP 1 Score: 202 bits (513), Expect = 1.400e-64
Identity = 108/137 (78.83%), Postives = 124/137 (90.51%), Query Frame = 0 
Query:    7 GKGKGGRGDKKSTSKSSKAGLQFPVARIGRYLKRGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKSGPGKAKS------SASQDY 137
            GKGKGGRGDKK+ SKS+KAGLQFPV R+GR+LK+G+YA RVGAGAPVY+AAV+EYL AEVLEL+GNAARDNKK+RIIPRHIQLAVRNDEELNKLLG+VTIA+GGVLPNIHAVLLPKK+   K+K+      SASQ+Y
Sbjct:    5 GKGKGGRGDKKAVSKSAKAGLQFPVGRVGRFLKQGRYAKRVGAGAPVYMAAVMEYLCAEVLELSGNAARDNKKSRIIPRHIQLAVRNDEELNKLLGKVTIAAGGVLPNIHAVLLPKKTRS-KSKAAEASTASASQEY 140
[Close]
BLAST of mRNA_F-serratus_M_contig1123.1135.1 vs. uniprot
Match: A0A448ZH28_9STRA (Histone H2A n=12 Tax=Bacillariophyta TaxID=2836 RepID=A0A448ZH28_9STRA)

HSP 1 Score: 200 bits (508), Expect = 4.510e-64
Identity = 102/119 (85.71%), Postives = 114/119 (95.80%), Query Frame = 0 
Query:    7 GKGKGGRGDKKSTSKSSKAGLQFPVARIGRYLKRGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKSG 125
            GKGKGGRG+KKST+ S+KAGLQFPV RIGRYL++GKYA+R+GAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RI+PRHI LAV+NDEELNKLLG VTIASGGVLPNIHA+LLPKKSG
Sbjct:    3 GKGKGGRGEKKSTTASAKAGLQFPVGRIGRYLRQGKYATRMGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHITLAVKNDEELNKLLGGVTIASGGVLPNIHAILLPKKSG 121
[Close]
BLAST of mRNA_F-serratus_M_contig1123.1135.1 vs. uniprot
Match: A0A7S3UYM8_HETAK (Histone H2A n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UYM8_HETAK)

HSP 1 Score: 200 bits (508), Expect = 1.600e-63
Identity = 108/133 (81.20%), Postives = 116/133 (87.22%), Query Frame = 0 
Query:    5 AGGKGKGGRGDKKSTSKSSKAGLQFPVARIGRYLKRGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKSGPGKAKSSASQDY 137
            AGGK   G   KKS SKSSKAGLQFPV RIGRYLK G+Y++RVGAGAPVYLAAVLEYL AE+LELAGNAARDNKK RIIPRH+QLAVRNDEELNKLLG VTI+ GGVLPNIH VLLPKKSG G +K SASQ+Y
Sbjct:   30 AGGKAAAGGRGKKSQSKSSKAGLQFPVGRIGRYLKNGRYSARVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTISQGGVLPNIHTVLLPKKSG-GSSKGSASQEY 161
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BLAST of mRNA_F-serratus_M_contig1123.1135.1 vs. uniprot
Match: K0S6I8_THAOC (Uncharacterized protein n=3 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S6I8_THAOC)

HSP 1 Score: 205 bits (522), Expect = 1.830e-63
Identity = 107/126 (84.92%), Postives = 118/126 (93.65%), Query Frame = 0 
Query:    7 GKGKGGRGDKKSTSKSSKAGLQFPVARIGRYLKRGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKSGPGKAKSS 132
            GKGKGGRG+KKST+ S+KAGLQFPV RIGRYL++GKYA+R+GAGAPVYLAAVLEYL AE+LELAGNAARDNKKARIIPRHI LAV+NDEELNKLLG VTIASGGVLPNIHAVLLPKKSG  +A+ S
Sbjct:    3 GKGKGGRGEKKSTTSSAKAGLQFPVGRIGRYLRQGKYATRMGAGAPVYLAAVLEYLCAEILELAGNAARDNKKARIIPRHITLAVKNDEELNKLLGGVTIASGGVLPNIHAVLLPKKSGKARAQRS 128
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1123.1135.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVQ5_ECTSI7.770e-7494.74Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
A0A6H5KG79_9PHAE8.550e-7493.28Histone H2A n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
A0A7S2CIK1_9STRA2.590e-6684.33Histone H2A n=1 Tax=Dictyocha speculum TaxID=35687... [more]
B7FWQ2_PHATC3.770e-6684.38Histone H2A n=9 Tax=Bacillariophyta TaxID=2836 Rep... [more]
D7FWI9_ECTSI4.710e-6692.37Histone H2A n=6 Tax=Ectocarpus TaxID=2879 RepID=D7... [more]
D7G193_ECTSI2.740e-6592.37Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
A0A835ZLE9_9STRA1.400e-6478.83Histone H2A n=2 Tax=Tribonema minus TaxID=303371 R... [more]
A0A448ZH28_9STRA4.510e-6485.71Histone H2A n=12 Tax=Bacillariophyta TaxID=2836 Re... [more]
A0A7S3UYM8_HETAK1.600e-6381.20Histone H2A n=1 Tax=Heterosigma akashiwo TaxID=282... [more]
K0S6I8_THAOC1.830e-6384.92Uncharacterized protein n=3 Tax=Thalassiosira ocea... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002119Histone H2APRINTSPR00620HISTONEH2Acoord: 75..89
score: 77.52
coord: 46..61
score: 90.36
coord: 103..121
score: 76.04
coord: 61..74
score: 90.54
coord: 17..39
score: 63.31
IPR002119Histone H2ASMARTSM00414h2a4coord: 6..126
e-value: 1.5E-78
score: 277.0
IPR032454Histone H2A, C-terminal domainPFAMPF16211Histone_H2A_Ccoord: 95..128
e-value: 1.5E-19
score: 69.4
IPR007125Histone H2A/H2B/H3PFAMPF00125Histonecoord: 12..92
e-value: 7.1E-16
score: 58.8
IPR009072Histone-foldGENE3D1.10.20.10coord: 5..132
e-value: 9.0E-62
score: 208.5
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 7..125
NoneNo IPR availablePANTHERPTHR23430:SF242coord: 7..136
NoneNo IPR availablePANTHERPTHR23430HISTONE H2Acoord: 7..136
IPR032458Histone H2A conserved sitePROSITEPS00046HISTONE_H2Acoord: 25..31

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1123contigF-serratus_M_contig1123:229686..230300 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1123.1135.1mRNA_F-serratus_M_contig1123.1135.1Fucus serratus malemRNAF-serratus_M_contig1123 229686..230300 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1123.1135.1 ID=prot_F-serratus_M_contig1123.1135.1|Name=mRNA_F-serratus_M_contig1123.1135.1|organism=Fucus serratus male|type=polypeptide|length=138bp
MSGKAGGKGKGGRGDKKSTSKSSKAGLQFPVARIGRYLKRGKYASRVGAG
APVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKL
LGEVTIASGGVLPNIHAVLLPKKSGPGKAKSSASQDY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002119Histone_H2A
IPR032454Histone_H2A_C
IPR007125Histone_H2A/H2B/H3
IPR009072Histone-fold
IPR032458Histone_H2A_CS