mRNA_F-serratus_M_contig1106.990.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1106.990.1
Unique NamemRNA_F-serratus_M_contig1106.990.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig1106.990.1 vs. uniprot
Match: D8LRT5_ECTSI (Serine--tRNA ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRT5_ECTSI)

HSP 1 Score: 622 bits (1604), Expect = 2.420e-221
Identity = 300/347 (86.46%), Postives = 323/347 (93.08%), Query Frame = 1
Query:    1 VDSEITTLFMGLPNLLDSRVPDGDGEEDNTVVSEWGQEYINSGEEYIWHDEIATKLGGWDPEGAVRIAGARFSVLKGPLARLERALGQWLLDVHTTEHGYTEVSVPLLVTKSSLEGTGQLPKFEDDLFKTNHLVANEESFLIPTGEVPVTNLLRGQLLDKSQLPISLVALTPCFRAEAGSAGRDTRGLLRQHQFLKVELVKFTTPEDSRSEHESLTQHAEAVLKASQTALQLPFRRVLLCSGDIGFGARLCYDLEVWMPGQGAYREISSCSNCHDFQARRMALRYREPAAPGSKSKSRNVPCHTINGSGVAVGRALVAILENYYNPSDGSVGVPDVLRPYMSGLDKI 1041
            VDSE+ TL M LPNLLDSRVPDGDGEE+N VV+EWGQEYI +GEEY+WHDE+A KLGGWDPEGA RI+GARFSVLKGPLARLERALGQWLLDVHTTEHGYTEVS+PLLVT+SSLEGTGQLPKFE+DLFKTNHLVANE+SFLIPTGEVP+TNLLRGQLLDK+QLP+SLVALTPCFRAEAGSAGRDTRGLLRQHQFLKVELVKFTTPEDSR+EHE+LTQHAEAVLKA    L+LPFRRV LCSGDIGFGARLCYDLEVWMPGQGA+REISSCSNC DFQARRM LRYREP     K KSRN+PCHTINGSGVAVGRALVA+LENYYNP DGSV +PDVLRPYM G +K+
Sbjct:  162 VDSELNTLLMRLPNLLDSRVPDGDGEEENVVVAEWGQEYIKNGEEYLWHDEVAIKLGGWDPEGAARISGARFSVLKGPLARLERALGQWLLDVHTTEHGYTEVSLPLLVTRSSLEGTGQLPKFEEDLFKTNHLVANEDSFLIPTGEVPLTNLLRGQLLDKAQLPMSLVALTPCFRAEAGSAGRDTRGLLRQHQFLKVELVKFTTPEDSRNEHEALTQHAEAVLKA----LKLPFRRVSLCSGDIGFGARLCYDLEVWMPGQGAFREISSCSNCQDFQARRMNLRYREPTPEAKKKKSRNLPCHTINGSGVAVGRALVAVLENYYNPIDGSVSIPDVLRPYMGGAEKL 504          
BLAST of mRNA_F-serratus_M_contig1106.990.1 vs. uniprot
Match: A0A835YK02_9STRA (Serine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK02_9STRA)

HSP 1 Score: 513 bits (1321), Expect = 6.170e-178
Identity = 249/354 (70.34%), Postives = 288/354 (81.36%), Query Frame = 1
Query:    1 VDSEITTLFMGLPNLLDSRVPDGDGEEDNTVVSEWGQEYINSGEEYIWHDEIATKLGGWDPEGAVRIAGARFSVLKGPLARLERALGQWLLDVHTTEHGYTEVSVPLLVTKSSLEGTGQLPKFEDDLFKTNHLVANEESFLIPTGEVPVTNLLRGQLLDKSQLPISLVALTPCFRAEAGSAGRDTRGLLRQHQFLKVELVKFTTPEDSRSEHESLTQHAEAVLKASQTALQLPFRRVLLCSGDIGFGARLCYDLEVWMPGQGAYREISSCSNCHDFQARRMALRYR-------EPAAPGSKSKSRNVPCHTINGSGVAVGRALVAILENYYNPSDGSVGVPDVLRPYMSGLDKI 1041
            VD  +  +FM LPNLLD+RV DG  E+DN +V EWGQEYI  G+EY+WHD+IAT+LGGWDPEGA R+AGARFSVLKG LARLERALGQW LDVHT EHGY EV+VPLLVT+S LEGTGQLPKFEDDLF+TNH V  E+SFLIPT EVP+TNL+RGQ+LD+S LP++  ALTPCFRAEAGS GRDTRGLLRQHQFLKVELV+ T+   S  EHE+LT HAE +L+     L+LP+R++ LCSGDIGF AR+CYDLEVW+PGQ A+REISSCSNC DFQARRM LRY+       E      K K   + CHTINGSGVAVGRALVA+LENY+NP DG+V VP+VLRPYM GL K+
Sbjct:  184 VDERVNDMFMRLPNLLDARVVDGSDEKDNELVLEWGQEYIKEGDEYLWHDDIATRLGGWDPEGASRVAGARFSVLKGQLARLERALGQWFLDVHTQEHGYQEVNVPLLVTRSVLEGTGQLPKFEDDLFQTNHKVGGEDSFLIPTAEVPLTNLVRGQMLDESDLPLAFAALTPCFRAEAGSYGRDTRGLLRQHQFLKVELVRVTSAASSADEHEALTGHAEKILQL----LKLPYRKMRLCSGDIGFSARMCYDLEVWLPGQKAFREISSCSNCGDFQARRMGLRYKGKDPYAEEGKGGKGKGKQTTLACHTINGSGVAVGRALVAVLENYFNPKDGTVTVPEVLRPYMGGLLKL 533          
BLAST of mRNA_F-serratus_M_contig1106.990.1 vs. uniprot
Match: A0A7S2UWA1_9STRA (Serine--tRNA ligase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWA1_9STRA)

HSP 1 Score: 479 bits (1234), Expect = 2.360e-165
Identity = 238/348 (68.39%), Postives = 279/348 (80.17%), Query Frame = 1
Query:    1 VDSEITTLFMGLPNLLDSRVPDGDGEEDNTVVSEWGQEY-INSGEEYIWHDEIATKLGGWDPEGAVRIAGARFSVLKGPLARLERALGQWLLDVHTTEHGYTEVSVPLLVTKSSLEGTGQLPKFEDDLFKTNHLVANEESFLIPTGEVPVTNLLRGQLLDKSQLPISLVALTPCFRAEAGSAGRDTRGLLRQHQFLKVELVKFTTPEDSRSEHESLTQHAEAVLKASQTALQLPFRRVLLCSGDIGFGARLCYDLEVWMPGQGAYREISSCSNCHDFQARRMALRYREPAAPGSKSKSRNVPCHTINGSGVAVGRALVAILENYYNPSDGSVGVPDVLRPYMSGLDKI 1041
            VD+E+ TLF GLPNLLD R  DGD +  N VVSEWG E  +  GE+Y+WHD+IA  +GGWDP+ +  I+GARFSVL+GPLARLERA+GQ+ LD HT ++GY EVSVP +VT+S+LEGTGQLPKFE+DLFK NH+ A E++FLIPT EVP+T+LLRG++LD   LPISL  LTPCFRAEAGS G+DTRGLLRQHQF KVELVK  TPE S   HE LT HAEA L+A    L+LP+R+V LCSGDIGFGAR+CYDLEVW+PGQ  +REI+SCSNC DFQARRM LRYR     G K K+  V CHT+NGSG+AVGR LVAILENYYNP DGSV VP+VL+PYM G  KI
Sbjct:  150 VDAEVNTLFAGLPNLLDPRTVDGDDDTQNEVVSEWGTEGGLKKGEQYLWHDDIALGVGGWDPDASSAISGARFSVLRGPLARLERAIGQFFLDEHTQKNGYEEVSVPYVVTRSTLEGTGQLPKFEEDLFKVNHVAAGEDAFLIPTAEVPLTSLLRGKVLDPKILPISLTGLTPCFRAEAGSYGQDTRGLLRQHQFHKVELVKICTPEQSFDAHEELTAHAEACLQA----LKLPYRKVRLCSGDIGFGARMCYDLEVWLPGQEMFREIASCSNCADFQARRMGLRYR--VVEGKKKKT--VFCHTMNGSGLAVGRTLVAILENYYNPEDGSVAVPEVLQPYMGGQKKI 489          
BLAST of mRNA_F-serratus_M_contig1106.990.1 vs. uniprot
Match: A0A7S3Y0F1_HETAK (Serine--tRNA ligase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y0F1_HETAK)

HSP 1 Score: 446 bits (1147), Expect = 4.060e-152
Identity = 217/334 (64.97%), Postives = 263/334 (78.74%), Query Frame = 1
Query:   40 NLLDSRVPDGDGEEDNTVVSEWGQEYINSGEEYIWHDEIATKLGGWDPEGAVRIAGARFSVLKGPLARLERALGQWLLDVHTTEHGYTEVSVPLLVTKSSLEGTGQLPKFEDDLFKTNHLVANEESFLIPTGEVPVTNLLRGQLLDKSQLPISLVALTPCFRAEAGSAGRDTRGLLRQHQFLKVELVKFTTPEDSRSEHESLTQHAEAVLKASQTALQLPFRRVLLCSGDIGFGARLCYDLEVWMPGQGAYREISSCSNCHDFQARRMALRYREPAAPGSKSKSRNVPCHTINGSGVAVGRALVAILENYYNPSDGSVGVPDVLRPYMSGLDKI 1041
            NLLD+ VP+GD +  N +V EW  + +  GEEY+WHDEIA KLGG+ PE A R++GARFSVL GP+ARLERAL Q+ LD+HT EHGY EV+ P +VT+S+L GTGQLPKFEDDLFK +H  A E++FLIPT EVP+TNL RG++L+   LP++  A TPCFRAEAGS GRDTRGLLRQHQF KVELVK  T E +++EHE LT+ AE  L+     L LP+R++ LCSGDIGFGARLCYDLEVW+PGQ A+RE++SCSNC DFQ RRM LRYR     G K   +N   HT+NGSG+AVGRALVA+LENYYNP DGS+ +P+VLRPYM GL+KI
Sbjct:  167 NLLDAAVPEGDDDGQNELVREWNTDNLKRGEEYLWHDEIAAKLGGFLPESAARLSGARFSVLAGPVARLERALMQFALDLHTLEHGYLEVATPYIVTRSTLRGTGQLPKFEDDLFKVSHEAAGEDAFLIPTSEVPLTNLHRGEILEGKALPLAFAACTPCFRAEAGSYGRDTRGLLRQHQFNKVELVKICTEEQAKAEHEKLTEDAEKALQL----LGLPYRKMRLCSGDIGFGARLCYDLEVWLPGQEAFREVASCSNCADFQGRRMNLRYRTVDENGKK---KNAFAHTMNGSGLAVGRALVAVLENYYNPEDGSLTIPEVLRPYMGGLEKI 493          
BLAST of mRNA_F-serratus_M_contig1106.990.1 vs. uniprot
Match: W7TYV7_9STRA (Serine--tRNA ligase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TYV7_9STRA)

HSP 1 Score: 447 bits (1150), Expect = 4.500e-152
Identity = 226/352 (64.20%), Postives = 270/352 (76.70%), Query Frame = 1
Query:    1 VDSEITTLFMGLPNLLDSRVPDGDGEEDNTVVSEWGQEYINSGEEYIWHDEIATKLGGWDPEGAVRIAGARFSVLKGPLARLERALGQWLLDVHTTEHGYTEVSVPLLVTKSSLEGTGQLPKFEDDLFKTNHLVANEESFLIPTGEVPVTNLLRGQLLDKSQLPISLVALTPCFRAEAGSAGRDTRGLLRQHQFLKVELVKFTTPEDSRSEHESLTQHAEAVLKASQTALQLPFRRVLLCSGDIGFGARLCYDLEVWMPGQGAYREISSCSNCHDFQARRMALRYREPAAPGS-----KSKSRNVPCHTINGSGVAVGRALVAILENYYNPSDGSVGVPDVLRPYMSGLDKI 1041
            ++ E+ +L + +PNLLD RVPDGD E +N VV EWG E    GE Y+WHD+IA KLGG+DP  A R++GARFS+L GPLARLERA+ Q+ LD HT E+GY EVSVP +V++S+L GTGQLPKFE+DLF  NH V  E++FLIPT EVP+TNL R ++L+ +QLP+S V LTPCFRAEAGS GRDT+GLLRQHQF KVELVK TTPE S +EHE+LT+ AE  L+     L+LP+R+V LCSGDIGF A  CYDLEVW+P Q  YREI+SCSNC DFQARRMALRYR PA  G+     K K   V CHTINGSG+AVGR LVAILENY    DGSV +P+VL PYM G  K+
Sbjct:  181 LEREMDSLMLQMPNLLDDRVPDGDDELNNEVVLEWGVERRKVGERYLWHDDIAAKLGGYDPAAAARLSGARFSILSGPLARLERAIVQFFLDQHTAENGYREVSVPYIVSRSTLTGTGQLPKFEEDLFAVNHQVNGEDAFLIPTAEVPITNLHRDEILEATQLPLSYVGLTPCFRAEAGSYGRDTKGLLRQHQFHKVELVKITTPEQSDAEHEALTRDAEECLRL----LELPYRKVRLCSGDIGFAAAHCYDLEVWLPAQQTYREIASCSNCRDFQARRMALRYR-PAPLGAAKEAGKGKKSTVLCHTINGSGLAVGRTLVAILENYQE-EDGSVRLPEVLVPYMGGTTKL 526          
BLAST of mRNA_F-serratus_M_contig1106.990.1 vs. uniprot
Match: A0A7S3Z8C3_9EUKA (Serine--tRNA ligase n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3Z8C3_9EUKA)

HSP 1 Score: 441 bits (1134), Expect = 2.910e-150
Identity = 224/360 (62.22%), Postives = 267/360 (74.17%), Query Frame = 1
Query:    1 VDSEITTLFMGLPNLLDSRVPDGDGEEDNTVVSEWGQEYINSGEEYIWHDEIATKLGGWDPEGAVRIAGARFSVLKGPLARLERALGQWLLDVHTTEHGYTEVSVPLLVTKSSLEGTGQLPKFEDDLFKTNHLVANEESFLIPTGEVPVTNLLRGQLLDKSQLPISLVALTPCFRAEAGSAGRDTRGLLRQHQFLKVELVKFTTPEDSRSEHESLTQHAEAVLKASQTALQLPFRRVLLCSGDIGFGARLCYDLEVWMPGQGAYREISSCSNCHDFQARRMALRYREPAAPGSKSKS----------------RNVPCHTINGSGVAVGRALVAILENYYNPSDGSVGVPDVLRPYMSGL 1032
            V+ E   LF  LPNLLD RVPDGD EE+N +V+ WG+EYI  GE+  WHDE+A  LGG+ PE AV+++G+RFSVL+GPLARLERAL  ++LD HT EHGY E SVP LV++  LEGTGQLPKFEDDLFKTNH ++  +SFLIPT EVP+T+L R  +L +S LPI LV  TPCFRAE+ S GRDTRGLLRQHQF KVELV  ++ E+S   HE +T+HAE +L+     L+LP+R+V LCSGDIGF AR CYDLEVWMPGQ  +REI+S SNC DFQARRM LRYR PA      K                 + V CHT+NGSGVAVGRALVA+LENY NP DGSV VP+VL PYM+G+
Sbjct:  120 VEGECNALFARLPNLLDQRVPDGDSEENNELVTLWGEEYIKKGEDMKWHDELAATLGGYAPEAAVKVSGSRFSVLRGPLARLERALSAFMLDTHTLEHGYEEHSVPYLVSRQVLEGTGQLPKFEDDLFKTNHDISGMDSFLIPTAEVPLTSLYRDDILQESNLPIKLVGHTPCFRAESDSGGRDTRGLLRQHQFHKVELVCISSKENSNEVHEKMTEHAETILRK----LKLPYRKVRLCSGDIGFSARHCYDLEVWMPGQDQFREIASISNCGDFQARRMGLRYR-PAEKDDAEKDEXXXXXXXXXXXXXXKKTVHCHTLNGSGVAVGRALVAVLENYQNP-DGSVTVPEVLVPYMNGV 473          
BLAST of mRNA_F-serratus_M_contig1106.990.1 vs. uniprot
Match: A0A8J5X803_DIALT (Serine--tRNA ligase n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X803_DIALT)

HSP 1 Score: 441 bits (1133), Expect = 7.710e-150
Identity = 225/356 (63.20%), Postives = 272/356 (76.40%), Query Frame = 1
Query:    1 VDSEITTLFMGLPNLLDSRVPDGDGEEDNTVVSEWGQEYINSGEEYIWHDEIATKLGGWDPEGAVRIAGARFSVLKGPLARLERALGQWLLDVHTTEHGYTEVSVPLLVTKSSLEGTGQLPKFEDDLFKTNHLVANEESFLIPTGEVPVTNLLRGQLLDKSQLPISLVALTPCFRAEAGSAGRDTRGLLRQHQFLKVELVKFTTPEDSRSEHESLTQHAEAVLKASQTALQLPFRRVLLCSGDIGFGARLCYDLEVWMPGQGAYREISSCSNCHDFQARRMALRYREPAAP---------GSKSKSRNVPCHTINGSGVAVGRALVAILENYYNPSDGSVGVPDVLRPYMSGLDKI 1041
            V+ E   L   LPNLLD RVPDG  + DN +VS+W        E   WHDEIAT+LGG D +GA +I+GARFSVL+GP+ARLERAL  + LD+HT +HGYTE++VP++V + +LEGTGQLPKFEDDLFK +  V   ++FLIPT EVP+TNLL G++L ++ LP++ VALTPCFRAEAGS GRDTRGL+RQHQF KVELV+ T   DS ++HE+LT+HAEA L+A    L+LP+RR+ LCSGDIGF AR CYDLEVW+PGQGA+REISSCSNC DFQARRMALRYR  AA          G  +  +   CHTINGSG+AVGRALVA+LENY  P DGSV VP+VLRPYM GL +I
Sbjct:  153 VELERAALLDALPNLLDPRVPDGADDTDNELVSQWQPAAGVRPETGDWHDEIATRLGGLDVDGAAKISGARFSVLRGPIARLERALANFFLDLHTGQHGYTEMAVPVIVGRGALEGTGQLPKFEDDLFKLSAPVNGRDAFLIPTAEVPLTNLLAGEILPEASLPLAFVALTPCFRAEAGSYGRDTRGLIRQHQFAKVELVRITAAHDSDAQHEALTRHAEACLEA----LELPYRRMRLCSGDIGFSARHCYDLEVWLPGQGAWREISSCSNCGDFQARRMALRYRPAAAAPDGDGQKKGGKAAAPKPTLCHTINGSGLAVGRALVAVLENYAQP-DGSVIVPEVLRPYMGGLARI 503          
BLAST of mRNA_F-serratus_M_contig1106.990.1 vs. uniprot
Match: A0A7S3T3K2_9SPIT (Serine--tRNA ligase n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3T3K2_9SPIT)

HSP 1 Score: 432 bits (1111), Expect = 7.780e-147
Identity = 217/348 (62.36%), Postives = 262/348 (75.29%), Query Frame = 1
Query:    1 VDSEITTLFMGLPNLLDSRVPDGDGEEDNTVVSEWGQEY-INSGEEYIWHDEIATKLGGWDPEGAVRIAGARFSVLKGPLARLERALGQWLLDVHTTEHGYTEVSVPLLVTKSSLEGTGQLPKFEDDLFKTNHLVANEESFLIPTGEVPVTNLLRGQLLDKSQLPISLVALTPCFRAEAGSAGRDTRGLLRQHQFLKVELVKFTTPEDSRSEHESLTQHAEAVLKASQTALQLPFRRVLLCSGDIGFGARLCYDLEVWMPGQGAYREISSCSNCHDFQARRMALRYREPAAPGSKSKSRNVPCHTINGSGVAVGRALVAILENYYNPSDGSVGVPDVLRPYMSGLDKI 1041
            V+SE  +LF  LPNLLD R PDG  EEDN  V EWG +  + SG    WHDE A  LGG D + A +++G+RF+VL+GP+ARLERA+  + LDVHT+EHGY EV+VP +V   +L GTGQLPKF++DLFK +  V   E++LIPT EVP+TNL  G +L+++ LPIS V  TPCFRAEAGS G+DTRGL RQHQF KVELVK TTPE S +EH +L  HAE  LK     L+LP+R+++LC GDIGF A+LCYDLEVW+PGQG +REISSCSNC  FQARRM LRYR P A G+  K + V CHTINGSG+AVGR LVAILENY N  DGS+ VP+VLRPYM GL+ I
Sbjct:  143 VESERDSLFATLPNLLDERTPDGVDEEDNVCVDEWGTDRDLPSGR--TWHDEAAAALGGLDMDAAAKLSGSRFAVLRGPIARLERAIANFFLDVHTSEHGYREVNVPFIVGAETLRGTGQLPKFQEDLFKLSEPVNGREAYLIPTAEVPITNLHAGDILEEASLPISYVGYTPCFRAEAGSHGKDTRGLFRQHQFYKVELVKITTPEQSDAEHHALVAHAEECLKR----LKLPYRKMMLCGGDIGFSAQLCYDLEVWLPGQGKFREISSCSNCGSFQARRMNLRYR-PTAAGTDKKQKPVHCHTINGSGLAVGRTLVAILENYQN-EDGSITVPEVLRPYMGGLEVI 482          
BLAST of mRNA_F-serratus_M_contig1106.990.1 vs. uniprot
Match: A0A7S2SGV2_9STRA (Serine--tRNA ligase (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SGV2_9STRA)

HSP 1 Score: 413 bits (1062), Expect = 1.760e-141
Identity = 203/322 (63.04%), Postives = 254/322 (78.88%), Query Frame = 1
Query:    1 VDSEITTLFMGLPNLLDSRVPDGDGEEDNTVVSEWGQEYINSGEEYIWHDEIATKLGGWDPEGAVRIAGARFSVLKGPLARLERALGQWLLDVHTTEHGYTEVSVPLLVTKSSLEGTGQLPKFEDDLFKT-NHLVANEESFLIPTGEVPVTNLLRGQLLDKSQLPISLVALTPCFRAEAGSAGRDTRGLLRQHQFLKVELVKFTTPEDSRSEHESLTQHAEAVLKASQTALQLPFRRVLLCSGDIGFGARLCYDLEVWMPGQGAYREISSCSNCHDFQARRMALRYREPAAPGSKSKSRNVPCHTINGSGVAVGRALVAILE 963
            VDS+   L   +PNLL  + PDG GE++N +V EWG +    GE+++WHDEIA +L GW+PEGA ++AGARFSVL G +ARLERAL Q+ LD HT ++ YTE++VP +V +S LEGTGQLPKFEDDLFK  NH    E++FLIPT EVP+TNL RG++LD+ +LP+S+ ALTPCFRAEAGS G+D RGL+RQHQF KVE+VK T+PE S  EHE++T+HAE +L+A    L+LP+RR+ LCSGDIGFGAR C+DLEVW+PGQ AYREISS SNC DFQARRM LR+R    PG K K +   CHT+NGSG+AVGRAL+A+LE
Sbjct:   28 VDSQCKQLLDAMPNLLHDQTPDGKGEQENELVKEWGTDQRMIGEDFLWHDEIAERLNGWNPEGAAKLAGARFSVLSGAVARLERALVQFFLDTHT-KNEYTEMAVPYIVGRSVLEGTGQLPKFEDDLFKLENHQANAEDAFLIPTAEVPLTNLYRGEILDQGRLPLSMTALTPCFRAEAGSYGKDVRGLMRQHQFHKVEMVKVTSPETSDEEHETMTRHAEELLEA----LELPYRRMRLCSGDIGFGARQCFDLEVWLPGQQAYREISSISNCCDFQARRMNLRFRGSPEPGKKGKGKVSFCHTLNGSGLAVGRALLAVLE 344          
BLAST of mRNA_F-serratus_M_contig1106.990.1 vs. uniprot
Match: A0A7S4CBW5_9EUGL (Serine--tRNA ligase n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4CBW5_9EUGL)

HSP 1 Score: 423 bits (1088), Expect = 4.150e-141
Identity = 216/351 (61.54%), Postives = 264/351 (75.21%), Query Frame = 1
Query:   10 EITTLFMGLPNLLDSRVPDGDGEEDNTVVSEWGQEYINSGEEYIWHDEIATKLGGWDPEGAVRIAGARFSVLKGPLARLERALGQWLLDVHTTEHGYTEVSVPLLVTKSSLEGTGQLPKFEDDLFKTNHLVANEESFLIPTGEVPVTNLLRGQLLDKSQLPISLVALTPCFRAEAGSAGRDTRGLLRQHQFLKVELVKFTTPEDSRSEHESLTQHAEAVLKASQTALQLPFRRVLLCSGDIGFGARLCYDLEVWMPGQGAYREISSCSNCHDFQARRMALRYREPAAPGSKSKS----RNVPCHTINGSGVAVGRALVAILENYYNPSDGSVGVPDVLRPYMSGLDKIVLS 1050
            E  +LF  LPNLL  R P+G  E++N +VSEWG +    G++Y WHDEIA  LGG+  EGA R+AGARF+VL   +ARLERAL Q++LD H   +GY E++VP +V +S LEGTGQLPKFEDDLFK +H V  ++ FLIPT EVP+TNL    +L++ QLP+S+ ALTPCFRAEAG  GRDTRGL+RQHQF KVELVK T PEDS+ EHE LT HAE +L+A    L+LP+R++ LC+GDIGF AR C+DLEVW+PGQ  YREISSCSNC+DFQARRM LRY++PA    K K      NV  HTINGSG+AVGRAL+A+LENY    DGSV VP+VL+ YM G  K VL+
Sbjct:  303 ECDSLFAVLPNLLADRTPEGANEDENELVSEWGTDLRKIGDDYKWHDEIAEGLGGYWTEGATRVAGARFAVLSNDVARLERALAQYMLDTHVA-NGYQEMAVPYIVGRSVLEGTGQLPKFEDDLFKVSHQVNGQDGFLIPTAEVPLTNLYANTILEERQLPVSMCALTPCFRAEAGGYGRDTRGLIRQHQFQKVELVKITAPEDSQKEHELLTSHAENILQA----LKLPYRKMRLCAGDIGFSARECFDLEVWLPGQQMYREISSCSNCYDFQARRMRLRYKKPAPXXXKGKKPKKPSNVFAHTINGSGIAVGRALLAVLENYQQ-EDGSVLVPEVLQKYMDG--KTVLT 645          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1106.990.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRT5_ECTSI2.420e-22186.46Serine--tRNA ligase n=1 Tax=Ectocarpus siliculosus... [more]
A0A835YK02_9STRA6.170e-17870.34Serine--tRNA ligase n=1 Tax=Tribonema minus TaxID=... [more]
A0A7S2UWA1_9STRA2.360e-16568.39Serine--tRNA ligase n=1 Tax=Fibrocapsa japonica Ta... [more]
A0A7S3Y0F1_HETAK4.060e-15264.97Serine--tRNA ligase n=1 Tax=Heterosigma akashiwo T... [more]
W7TYV7_9STRA4.500e-15264.20Serine--tRNA ligase n=3 Tax=Monodopsidaceae TaxID=... [more]
A0A7S3Z8C3_9EUKA2.910e-15062.22Serine--tRNA ligase n=1 Tax=Lotharella globosa Tax... [more]
A0A8J5X803_DIALT7.710e-15063.20Serine--tRNA ligase n=1 Tax=Diacronema lutheri Tax... [more]
A0A7S3T3K2_9SPIT7.780e-14762.36Serine--tRNA ligase n=1 Tax=Strombidinopsis acumin... [more]
A0A7S2SGV2_9STRA1.760e-14163.04Serine--tRNA ligase (Fragment) n=1 Tax=Rhizochromu... [more]
A0A7S4CBW5_9EUGL4.150e-14161.54Serine--tRNA ligase n=1 Tax=Eutreptiella gymnastic... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1106contigF-serratus_M_contig1106:88664..91145 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score614.8
Seed ortholog evalue2.5e-173
Seed eggNOG ortholog2880.D8LRT5
KEGG rclassRC00055,RC00523
KEGG koko:K01875
KEGG ReactionR03662,R08218
KEGG Pathwayko00970,map00970
KEGG ModuleM00359,M00360
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004828,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006434,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.seryl-tRNA aminoacylation
EggNOG OGsCOG0172@1,KOG2509@2759
EC6.1.1.11
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01007,ko03016
Exons7
Model size1053
Cds size1026
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1106.990.1prot_F-serratus_M_contig1106.990.1Fucus serratus malepolypeptideF-serratus_M_contig1106 88664..91118 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928982.4629838-CDS-F-serratus_M_contig1106:88663..888391622928982.4629838-CDS-F-serratus_M_contig1106:88663..88839Fucus serratus maleCDSF-serratus_M_contig1106 88664..88839 -
1690962655.2232919-CDS-F-serratus_M_contig1106:88663..888391690962655.2232919-CDS-F-serratus_M_contig1106:88663..88839Fucus serratus maleCDSF-serratus_M_contig1106 88664..88839 -
1622928982.5098877-CDS-F-serratus_M_contig1106:88987..891801622928982.5098877-CDS-F-serratus_M_contig1106:88987..89180Fucus serratus maleCDSF-serratus_M_contig1106 88988..89180 -
1690962655.2414868-CDS-F-serratus_M_contig1106:88987..891801690962655.2414868-CDS-F-serratus_M_contig1106:88987..89180Fucus serratus maleCDSF-serratus_M_contig1106 88988..89180 -
1622928982.5234478-CDS-F-serratus_M_contig1106:89354..894501622928982.5234478-CDS-F-serratus_M_contig1106:89354..89450Fucus serratus maleCDSF-serratus_M_contig1106 89355..89450 -
1690962655.2547069-CDS-F-serratus_M_contig1106:89354..894501690962655.2547069-CDS-F-serratus_M_contig1106:89354..89450Fucus serratus maleCDSF-serratus_M_contig1106 89355..89450 -
1622928982.540832-CDS-F-serratus_M_contig1106:89626..897281622928982.540832-CDS-F-serratus_M_contig1106:89626..89728Fucus serratus maleCDSF-serratus_M_contig1106 89627..89728 -
1690962655.2705538-CDS-F-serratus_M_contig1106:89626..897281690962655.2705538-CDS-F-serratus_M_contig1106:89626..89728Fucus serratus maleCDSF-serratus_M_contig1106 89627..89728 -
1622928982.5542815-CDS-F-serratus_M_contig1106:90125..903271622928982.5542815-CDS-F-serratus_M_contig1106:90125..90327Fucus serratus maleCDSF-serratus_M_contig1106 90126..90327 -
1690962655.2783682-CDS-F-serratus_M_contig1106:90125..903271690962655.2783682-CDS-F-serratus_M_contig1106:90125..90327Fucus serratus maleCDSF-serratus_M_contig1106 90126..90327 -
1622928982.566603-CDS-F-serratus_M_contig1106:90486..906381622928982.566603-CDS-F-serratus_M_contig1106:90486..90638Fucus serratus maleCDSF-serratus_M_contig1106 90487..90638 -
1690962655.2855608-CDS-F-serratus_M_contig1106:90486..906381690962655.2855608-CDS-F-serratus_M_contig1106:90486..90638Fucus serratus maleCDSF-serratus_M_contig1106 90487..90638 -
1622928982.57945-CDS-F-serratus_M_contig1106:91013..911181622928982.57945-CDS-F-serratus_M_contig1106:91013..91118Fucus serratus maleCDSF-serratus_M_contig1106 91014..91118 -
1690962655.2926822-CDS-F-serratus_M_contig1106:91013..911181690962655.2926822-CDS-F-serratus_M_contig1106:91013..91118Fucus serratus maleCDSF-serratus_M_contig1106 91014..91118 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928982.5901637-UTR-F-serratus_M_contig1106:91118..911451622928982.5901637-UTR-F-serratus_M_contig1106:91118..91145Fucus serratus maleUTRF-serratus_M_contig1106 91119..91145 -
1690962655.3012428-UTR-F-serratus_M_contig1106:91118..911451690962655.3012428-UTR-F-serratus_M_contig1106:91118..91145Fucus serratus maleUTRF-serratus_M_contig1106 91119..91145 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1106.990.1

>prot_F-serratus_M_contig1106.990.1 ID=prot_F-serratus_M_contig1106.990.1|Name=mRNA_F-serratus_M_contig1106.990.1|organism=Fucus serratus male|type=polypeptide|length=342bp
MGLPNLLDSRVPDGDGEEDNTVVSEWGQEYINSGEEYIWHDEIATKLGGW
DPEGAVRIAGARFSVLKGPLARLERALGQWLLDVHTTEHGYTEVSVPLLV
TKSSLEGTGQLPKFEDDLFKTNHLVANEESFLIPTGEVPVTNLLRGQLLD
KSQLPISLVALTPCFRAEAGSAGRDTRGLLRQHQFLKVELVKFTTPEDSR
SEHESLTQHAEAVLKASQTALQLPFRRVLLCSGDIGFGARLCYDLEVWMP
GQGAYREISSCSNCHDFQARRMALRYREPAAPGSKSKSRNVPCHTINGSG
VAVGRALVAILENYYNPSDGSVGVPDVLRPYMSGLDKIVLS*
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mRNA from alignment at F-serratus_M_contig1106:88664..91145-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1106.990.1 ID=mRNA_F-serratus_M_contig1106.990.1|Name=mRNA_F-serratus_M_contig1106.990.1|organism=Fucus serratus male|type=mRNA|length=2482bp|location=Sequence derived from alignment at F-serratus_M_contig1106:88664..91145- (Fucus serratus male)
GTAGACAGTGAGATCACTACGCTGTTTATGGGTTTGCCAAACCTGCTGGA CTCTCGGGTTCCAGATGGCGACGGTGAAGAGGATAATACAGTGGTGTCAG AGTGGGGGCAGGAGTACATCAACAGCGGAGAGGTGCGTGTTTCTCTTTAA CAGAAAGTAATCTCCATGCCTCTAATAGTGTCTCGAGGTTATTTCCCTCA TATCTGCGAGTTTGGCGTTCCACCTAGTATGATTGAATGATTGACTATCC AGCACCTCTGAGCTCGCCAGTCGGCGCATGCGCGCCCTCACTGTCGATGG GTGTGAATGCTCAACATTTCGATAGCAAAAGCTCAAGGAGCTCCTCGCCC ACCGACATACGACGGGTCTATATTTGTAATCGCTTCCTAAGTTCTGCCTT GATTGCAGCCAGAGACGTACATCAGCGTCACTCGTCTTCTTATGTGTAAG CGAGGTGCTTAGTTAACGCAAAAAACTGCCCGAACGCCGTTAAACTTCCC CCGTTAGGAGTACATCTGGCACGACGAGATAGCTACAAAGCTTGGAGGTT GGGATCCAGAGGGCGCGGTAAGAATAGCGGGTGCGAGGTTTTCTGTTCTT AAGGGACCTCTGGCAAGATTGGAGCGAGCTCTTGGACAATGGCTACTCGA TGTTCACACGTGAGTCTCTCGTTCTCGCTGATGCTAGATGACGCACTGAT GTGGCCTGAGATACAAATAAAACGTCGAATCCAAATAAAATGGCCTCTTG ATTTCATCCATTTTCTTTTTAATTATGTGTCCGGTGCCATCGTCGATTGA ATCCAACTTGCGCTACAGCACCGAACATGGGTACACAGAGGTTTCTGTGC CGTTACTGGTGACCAAGAGCTCTCTCGAGGGGACAGGACAGCTGCCAAAG TTCGAGGATGATCTGTTCAAGACCAATCACTTGGTTGCGAACGAAGAAAG CTTCTTAATTCCCACCGGCGAAGTACCTGTGACGAATCTTCTTCGGGGCC AGTTACTTGATAAGTCTCAAGTAAGATTTCACGGCTAGCACCGCATGAAA GTTGTCAACGATACCTATTTTGAACCTTCTATCGCGCGGTCTGCTATCCG TTGTTAACGATGTCGGGACCTTATTGAGACGCCAAAGCAAATCGCCCATT CTATCGTGATCATGAAAGCTACAATTTCTCTCATGCGGTCAACCTGACCA TGGCTCAGCAGAGTACTCTGCAGGGTACTGCAAGCTTGTAGGTATATACC GATGAAGCCACCCGTGCATGAGAGCTATGTAAATGTTGGGTAATATATAG GAAATGGGCGCTCGATAATATTTTCCGTAATTCCTGATTGAGCCTGAAGT TATTGGATATTGGCGTCGTAATTCGCACCATAATAACTTGCCAACCCTAG TTATCTTGTCCGCGCAGCTTCCTATATCCTTAGTGGCCTTGACACCATGC TTTAGAGCCGAGGCGGGCTCGGCTGGGAGAGACACGCGTGGACTCCTCCG ACAGCATCAGTTTCTCAAGGTACGAGCTATTCTATCGTTAACGGAACCTA GTGACACAACGATGTTTAAGCTGGACGGTGCGTTGATAACGGCGCCTGCG GTCCATACATACAACTTTGAGAAAAAGCTGGACATGCGATGGATTGCACC GAACAACGCACGCCACTAAATGTGTACATATTCATTCACATTCAGGTGGA ACTCGTTAAATTTACAACCCCGGAAGATAGCCGGAGTGAACATGAGTCGC TCACGCAGCACGCAGAGGCGGTTTTGAAGGCAAGTCAAACAGTTCTCTCG TTACGCGTGTGGCACTGTAGAGAGCTTATCATAGGCATCCTTTGCGTGTG TGTTGATTGCATCAAAGTCAGAAAGGAGCTTTCTTATCCGATGACTAGCT AACGCTTAGTTGAGATACAAACACAAATTCCCTGCTGTCCAACATCGTGT TACTCAAAAACGCAGGCGCTTCAATTACCATTCCGGAGGGTGTTACTGTG TAGTGGTGATATCGGATTTGGCGCTCGTCTCTGCTATGACTTGGAAGTAT GGATGCCTGGACAGGGCGCGTACAGAGAAATATCCTCTTGCAGCAACTGC CACGACTTCCAAGCGCGTCGAATGGCTCTACGTTACAGAGAGCCTGCTGC CCCTGGAAGTGAGCGCAGACGATTGGTTTGAAAGGTTGGCATTGCAGATG GACCGTTTTTGAAGCTTCAAGGCCCAACGACGTTGCTGCTTCTGATACAC CAAACAATGTTTTGTAACCATGGCCCTGAAACTTTTACCGCTCACCCGTT CCGCAGGTAAATCCAAGTCACGTAATGTTCCGTGCCATACAATCAACGGG TCAGGAGTTGCTGTTGGTCGCGCACTTGTGGCTATATTGGAGAACTACTA CAACCCATCTGATGGTTCGGTAGGGGTCCCGGACGTCCTCCGACCCTACA TGAGTGGTTTGGATAAGATAGTTCTTAGTTAA
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Coding sequence (CDS) from alignment at F-serratus_M_contig1106:88664..91145-

>mRNA_F-serratus_M_contig1106.990.1 ID=mRNA_F-serratus_M_contig1106.990.1|Name=mRNA_F-serratus_M_contig1106.990.1|organism=Fucus serratus male|type=CDS|length=2052bp|location=Sequence derived from alignment at F-serratus_M_contig1106:88664..91145- (Fucus serratus male)
ATGGGTTTGCCAAACCTGCTGGACTCTCGGGTTCCAGATGGCGACGGTGA
AGAGGATAATACAGTGGTGTCAGAGTGGGGGCAGGAGTACATCAACAGCG
GAGAGATGGGTTTGCCAAACCTGCTGGACTCTCGGGTTCCAGATGGCGAC
GGTGAAGAGGATAATACAGTGGTGTCAGAGTGGGGGCAGGAGTACATCAA
CAGCGGAGAGGAGTACATCTGGCACGACGAGATAGCTACAAAGCTTGGAG
GTTGGGATCCAGAGGGCGCGGTAAGAATAGCGGGTGCGAGGTTTTCTGTT
CTTAAGGGACCTCTGGCAAGATTGGAGCGAGCTCTTGGACAATGGCTACT
CGATGTTCACACGAGTACATCTGGCACGACGAGATAGCTACAAAGCTTGG
AGGTTGGGATCCAGAGGGCGCGGTAAGAATAGCGGGTGCGAGGTTTTCTG
TTCTTAAGGGACCTCTGGCAAGATTGGAGCGAGCTCTTGGACAATGGCTA
CTCGATGTTCACACCACCGAACATGGGTACACAGAGGTTTCTGTGCCGTT
ACTGGTGACCAAGAGCTCTCTCGAGGGGACAGGACAGCTGCCAAAGTTCG
AGGATGATCTGTTCAAGACCAATCACTTGGTTGCGAACGAAGAAAGCTTC
TTAATTCCCACCGGCGAAGTACCTGTGACGAATCTTCTTCGGGGCCAGTT
ACTTGATAAGTCTCAACACCGAACATGGGTACACAGAGGTTTCTGTGCCG
TTACTGGTGACCAAGAGCTCTCTCGAGGGGACAGGACAGCTGCCAAAGTT
CGAGGATGATCTGTTCAAGACCAATCACTTGGTTGCGAACGAAGAAAGCT
TCTTAATTCCCACCGGCGAAGTACCTGTGACGAATCTTCTTCGGGGCCAG
TTACTTGATAAGTCTCAACTTCCTATATCCTTAGTGGCCTTGACACCATG
CTTTAGAGCCGAGGCGGGCTCGGCTGGGAGAGACACGCGTGGACTCCTCC
GACAGCATCAGTTTCTCAAGCTTCCTATATCCTTAGTGGCCTTGACACCA
TGCTTTAGAGCCGAGGCGGGCTCGGCTGGGAGAGACACGCGTGGACTCCT
CCGACAGCATCAGTTTCTCAAGGTGGAACTCGTTAAATTTACAACCCCGG
AAGATAGCCGGAGTGAACATGAGTCGCTCACGCAGCACGCAGAGGCGGTT
TTGAAGGCAAGTCAAACAGTGGAACTCGTTAAATTTACAACCCCGGAAGA
TAGCCGGAGTGAACATGAGTCGCTCACGCAGCACGCAGAGGCGGTTTTGA
AGGCAAGTCAAACAGCGCTTCAATTACCATTCCGGAGGGTGTTACTGTGT
AGTGGTGATATCGGATTTGGCGCTCGTCTCTGCTATGACTTGGAAGTATG
GATGCCTGGACAGGGCGCGTACAGAGAAATATCCTCTTGCAGCAACTGCC
ACGACTTCCAAGCGCGTCGAATGGCTCTACGTTACAGAGAGCCTGCTGCC
CCTGGAAGCGCTTCAATTACCATTCCGGAGGGTGTTACTGTGTAGTGGTG
ATATCGGATTTGGCGCTCGTCTCTGCTATGACTTGGAAGTATGGATGCCT
GGACAGGGCGCGTACAGAGAAATATCCTCTTGCAGCAACTGCCACGACTT
CCAAGCGCGTCGAATGGCTCTACGTTACAGAGAGCCTGCTGCCCCTGGAA
GTAAATCCAAGTCACGTAATGTTCCGTGCCATACAATCAACGGGTCAGGA
GTTGCTGTTGGTCGCGCACTTGTGGCTATATTGGAGAACTACTACAACCC
ATCTGATGGTTCGGTAGGGGTCCCGGACGTCCTCCGACCCTACATGAGTG
GTTTGGATAAGATAGTTCTTAGTTAAGTAAATCCAAGTCACGTAATGTTC
CGTGCCATACAATCAACGGGTCAGGAGTTGCTGTTGGTCGCGCACTTGTG
GCTATATTGGAGAACTACTACAACCCATCTGATGGTTCGGTAGGGGTCCC
GGACGTCCTCCGACCCTACATGAGTGGTTTGGATAAGATAGTTCTTAGTT
AA
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