mRNA_F-serratus_M_contig1094.869.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1094.869.1 vs. uniprot
Match: D8LN66_ECTSI (PB1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN66_ECTSI) HSP 1 Score: 203 bits (517), Expect = 2.830e-54 Identity = 146/304 (48.03%), Postives = 177/304 (58.22%), Query Frame = 3 Query: 114 NTKTKPEDTMTCARSVKIKFQGKSRDVTLPLHMPPTLAGLQAAVSSIFRADLPPRSTEVEGAADGDLRFICKGFLGEDIVFDKDAELSLALRLSPGPLEISAARKVESKIEPHDSD-RIYKVAARNLLENHGVPSMTFDKLTRTLDLLELGPGRLVKQGLAPKT-------------KYERVPPGDQEAEEDIAPMIGADMGLMAVEVDAEEEDAKEHNHNLVEDE-ADKSSL----EEKGGDGAMEIRDPKKQFNRGPKMPIHAVLDAAGIKLHSREVSPLLVALGVHPHHFVKLGLIDANDL 968 N + ++TMT + S+KI FQG SRDV +P P TLA LQA +++ F A+LP RS E A D DL F K G+DIVFDKD+EL LA+RL PG LEISAA K + E DS+ R+YK+AARNL E +GVPSMT KL +TL L+L P RLVKQGLAPK K +VP GD + ED+A + A M LM++E +D KE N V E AD SS EEK A E++ K IH A GI+L REV PLLVAL V P KLGL+D DL Sbjct: 8 NNRDNNDNTMTTS-SIKINFQGASRDVNVPA--PVTLASLQAVIAAAFDAELPVRSPGGEAAKDTDLSFTYKDPDGDDIVFDKDSELKLAMRLCPGSLEISAAGKEKKAAEMPDSEARLYKIAARNLREYNGVPSMTPPKLVKTLAFLKLNPQRLVKQGLAPKNLLPRMKAEAANNAKVSKVPLGDGKNNEDLAESVAAGMELMSLE-----DDKKEWNDGFVSVEPADTSSPDNDNEEKNDAVAPEVK----------KNLIHKAFIAGGIQLRPREVRPLLVALDVRPCRLAKLGLVDGKDL 293
BLAST of mRNA_F-serratus_M_contig1094.869.1 vs. uniprot
Match: A0A6H5KAY7_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAY7_9PHAE) HSP 1 Score: 201 bits (512), Expect = 1.550e-53 Identity = 138/300 (46.00%), Postives = 175/300 (58.33%), Query Frame = 3 Query: 111 KNTKTKPEDTMTCARSVKIKFQGKSRDVTLPLHMPPTLAGLQAAVSSIFRADLPPRSTEVEGAADGDLRFICKGFLGEDIVFDKDAELSLALRLSPGPLEISAARKVESKIEPHDSDR-IYKVAARNLLENHGVPSMTFDKLTRTLDLLELGPGRLVKQGLAPK-------------TKYERVPPGDQEAEEDIAPMIGADMGLMAVEVDAEEEDAKEHNHNLVEDEADKSSLEEKGGDGAMEIRDPKKQFNRGPKMPIHAVLDAAGIKLHSREVSPLLVALGVHPHHFVKLGLIDANDL 968 +N + + TMT + S+KI FQG SRDV++P P TLA LQAA++++F +LP RS E A D DL F K G+DIVFDKD+EL+LALRL PG LEISAA K + DS+ +YK+AARNL E +GVPSMT KL +TL L+L P RLVKQGLAPK K +V GD + ED+A + A M M+VE +D KE N V E ++S + G + + P+ + N IH A GI+L REV PLLVAL V P KLGL+D DL Sbjct: 18 RNNRYNNDKTMTTS-SIKINFQGASRDVSVPA--PATLARLQAAIAAVFEVELPVRSLTGEAAKDTDLSFTYKDPDGDDIVFDKDSELNLALRLCPGSLEISAAGKENKATKMPDSEETLYKIAARNLREYNGVPSMTPPKLVKTLAFLKLNPQRLVKQGLAPKMLLARMKAETANNAKLSKVRLGDGKNNEDLAEWVAAGMEFMSVE-----DDKKEWNDGFVSVEPAETSSSDNGNEEENDDAAPEVKQNL-----IHKAFIAGGIQLRPREVRPLLVALDVRPWRLAKLGLVDGKDL 304
BLAST of mRNA_F-serratus_M_contig1094.869.1 vs. uniprot
Match: D8LN68_ECTSI (PB1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN68_ECTSI) HSP 1 Score: 199 bits (505), Expect = 5.530e-52 Identity = 142/290 (48.97%), Postives = 168/290 (57.93%), Query Frame = 3 Query: 156 SVKIKFQGKSRDVTLPLHMPPTLAGLQAAVSSIFRADLPPRSTEVEGAADGDLRFICKGFLGEDIVFDKDAELSLALRLSPGPLEISAARKVESKIEPHDSD-RIYKVAARNLLENHGVPSMTFDKLTRTLDLLELGPGRLVKQGLAPKT-------------KYERVPPGDQEAEEDIAPMIGADMGLMAVEVDAEEEDAKEHNHNLVEDE-ADKSSL----EEKGGDGAMEIRDPKKQFNRGPKMPIHAVLDAAGIKLHSREVSPLLVALGVHPHHFVKLGLIDANDL 968 S+KI FQG SRDV +P+ P TLA LQAA++ F A+LP RS E A D DL F K G+DIVFDKD+EL+LA+RL PG LEISAA K D + R+YK+AARNL E +GVPSMT KL +TL LEL P RLVKQGLAPK K +VP GD + ED+A + A M LM+VE +D KE N V E AD SS EEK A E++ K IH A GI+L REV PLLVAL V P KLGL++ DL Sbjct: 5 SIKINFQGTSRDVNVPV--PVTLASLQAAIAGAFDAELPVRSPAGEAAKDTDLSFTYKDPDGDDIVFDKDSELNLAVRLCPGSLEISAAGKENKPANKPDPEARLYKIAARNLREYNGVPSMTPLKLVKTLAFLELNPQRLVKQGLAPKVLLARMKAEAANNAKVSKVPLGDGKNNEDLAESVAAGMELMSVE-----DDKKEWNDGFVSVEPADTSSPGNDNEEKNDAVAPEVK----------KNLIHKAFIAGGIQLRPREVRPLLVALDVRPCRLAKLGLVNGKDL 277
BLAST of mRNA_F-serratus_M_contig1094.869.1 vs. uniprot
Match: A0A6H5JQ17_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ17_9PHAE) HSP 1 Score: 196 bits (497), Expect = 9.170e-51 Identity = 143/321 (44.55%), Postives = 174/321 (54.21%), Query Frame = 3 Query: 93 AIPRSLKNTKTKPEDTMTCARSVKIKFQGKSRDVTLPLHMPPTLAGLQAAVSSIFRADLPPRSTEVEGAADGDLRFICKGFLGEDIVFDKDAELSLALRLSPGPLEISAARKV-ESKIEPHDSDRIYKVAARNLLENHGVPSMTFDKLTRTLDLLELGPGRLVKQGLAPKT-------------KYERVPPGDQEAEEDIAPMIGADMGLMAVEVDAEEEDAKEHNHNLVEDEADKSSL---------------EEKGGDGAMEIRDPKKQFNRGPKMPIHAVLDAAGIKLHSREVSPLLVALGVHPHHFVKLGLIDANDL 968 AI + N + + TMT S+KI FQG SRDV +P P +LA LQAA+++ F A+LP RS E A D DL F K G+DIVFDKD+EL LA+RL P LEISA K E +P R+YK+AARNL E +GVPSMT KL +TL L+L P RLVKQGLAPK K +VP GD + ED+A + A M LM+VE +D KE N V E+D S+ EE+ D A E + K IH GI+L REV PLLVAL V P KLGL+D DL Sbjct: 3 AINHNNNNNRYNNDKTMTTP-SIKINFQGASRDVNVPA--PVSLASLQAAIAAAFDAELPVRSPAGEAAKDTDLSFTYKDPDGDDIVFDKDSELKLAVRLCPSSLEISATLKESEPAKKPDPEARLYKIAARNLREYNGVPSMTAPKLIKTLAFLKLNPQRLVKQGLAPKVLLARMKAEAANNAKVSKVPLGDGKNNEDLAESVAAGMELMSVE-----DDKKEWNDGFVSAESDASAAAVPITAKTSTPDNDNEEENNDAAPETK----------KDLIHKAFITGGIQLRPREVRPLLVALDVRPCRLAKLGLVDGKDL 305
BLAST of mRNA_F-serratus_M_contig1094.869.1 vs. uniprot
Match: A0A6H5JPU3_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPU3_9PHAE) HSP 1 Score: 189 bits (480), Expect = 4.380e-49 Identity = 136/295 (46.10%), Postives = 167/295 (56.61%), Query Frame = 3 Query: 138 TMTCARSVKIKFQGKSRDVTLPLHMPPTLAGLQAAVSSIFRADLPPRSTEVEGAADGDLRFICKGFLGEDIVFDKDAELSLALRLSPGPLEISAARKVESKIEPHDSD-RIYKVAARNLLENHGVPSMTFDKLTRTLDLLELGPGRLVKQGLAPKT-------------KYERVPPGDQEAEEDIAPMIGADMGLMAVEVDAEEEDAKEHNHNLVEDEADKSSL----EEKGGDGAMEIRDPKKQFNRGPKMPIHAVLDAAGIKLHSREVSPLLVALGVHPHHFVKLGLIDANDL 968 TMT + S+KI FQG SRDV + +P LA LQAA+++ F +LP RS+ E A D DL F K G+DIVFDK++EL LALRL PG LEISAA K DS+ ++YK+AARNL E +GVPSMT KL +TL L+L P RLVKQGLAPK K +VP GD + ED+A + A M LM+VE + KE N V E + S E+ D A E + K IH A GI+L REV PLLVAL V P+ KLGL+ DL Sbjct: 18 TMTTS-SIKITFQGASRDVNV--RVPVMLASLQAAIAAAFDVELPARSSAGEAANDTDLSFTYKDPDGDDIVFDKESELQLALRLCPGSLEISAAGKENKATRMPDSEEKLYKIAARNLREYNGVPSMTPPKLVKTLAFLKLNPQRLVKQGLAPKVLLARMKAEAANNAKVSKVPLGDGKNNEDLAESVAAGMELMSVE-----DGKKEWNDGFVSVEPAEISFPANDNEEKNDAAPEAK----------KNLIHKAFIAGGIQLRPREVRPLLVALDVLPYRLAKLGLVGGKDL 294
BLAST of mRNA_F-serratus_M_contig1094.869.1 vs. uniprot
Match: A0A6H5KB69_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB69_9PHAE) HSP 1 Score: 184 bits (466), Expect = 2.540e-46 Identity = 134/301 (44.52%), Postives = 166/301 (55.15%), Query Frame = 3 Query: 156 SVKIKFQGKSRDVTLPLHMPPTLAGLQAAVSSIFRADLPPRSTEVEGAADGDLRFICKGFLGEDIVFDKDAELSLALRLSPGPLEISAARKVESKIE--PHDSDRIYKVAARNLLENHGVPSMTFDKLTRTLDLLELGPGRLVKQGLAPKT-------------KYERVPPGDQEAEEDIAPMIGADMGLMAVEVDAEEEDAKEHNHNLVEDEADKSSL---------------EEKGGDGAMEIRDPKKQFNRGPKMPIHAVLDAAGIKLHSREVSPLLVALGVHPHHFVKLGLIDANDL 968 S+KI FQG SR+V + P TLA LQA +++ F A+LP RS E D DL F K G+DIVFDKD+EL+LA+RL P LEISAA K E+K + P R+YK+AARNL E +GVPSMT KL +TL L+L P RLVKQGLAPK K +V GD E ED+A + A M LM+VE +D KE N+ V + D S+ EE+ D A E++ K IH A GI+L REV PLLVAL V P KLGL++ L Sbjct: 5 SIKINFQGTSRNVNV--QAPFTLASLQATIAAAFDAELPVRSPAGEATKDTDLSFTYKDPDGDDIVFDKDSELNLAVRLCPDSLEISAAGK-ENKPDNKPDPEGRLYKIAARNLREYNGVPSMTAPKLIKTLAFLKLNPRRLVKQGLAPKNLLARMKAEAANNMKVSKVTLGDGENNEDLAESVAAGMELMSVE-----DDKKECNNGFVSAKPDASAAAVPITAKTSSPDNDNEEENDDAAPEVK----------KNLIHTAFIAGGIQLRPREVRPLLVALDVRPWRLAKLGLVNGKYL 287
BLAST of mRNA_F-serratus_M_contig1094.869.1 vs. uniprot
Match: D8LN82_ECTSI (PB1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN82_ECTSI) HSP 1 Score: 168 bits (426), Expect = 5.210e-43 Identity = 126/282 (44.68%), Postives = 152/282 (53.90%), Query Frame = 3 Query: 135 DTMTCARSVKIKFQGKSRDVTLPLHMPPTLAGLQAAVSSIFRADLPPRSTEVEGAADGDLRFICKGFLGEDIVFDKDAELSLALRLSPGPLEISAARKVESKI--EPHDSDRIYKVAARNLLENHGVPSMTFDKLTRTLDLLELGPGRLVKQGLAPKT-------------KYERVPPGDQEAEEDIAPMIGADMGLMAVEVDAEEEDAKEHNHNLVEDEADKSSL---------------EEKGGDGAMEIRDPKKQFNRGPKMPIHAVLDAAGIKLHSRE 890 D M S+KI FQG SRDV +P P TL LQAA+++ F A+LP RS E A D DL F K G+DIVFDKD+EL LA+RL P LEISAA K ESK +P R+YK+AARNL E +GVPSMT KL +TL L+L P RLVKQGLAPK K +VP GD + ED+A + A M LM+VE D KE N V E+D + EE+ D A E++ K IH A GI+L RE Sbjct: 13 DKMMTTSSIKINFQGASRDVNVPA--PVTLDSLQAAIAAAFDAELPVRSPAGEAAKDTDLSFTYKDPDGDDIVFDKDSELKLAVRLCPSSLEISAALK-ESKPANKPDPEARLYKIAARNLREYNGVPSMTPPKLIKTLAFLKLNPQRLVKQGLAPKVLLARMKAEAANNAKVSKVPLGDGKNNEDLADSVAAGMELMSVE------DKKEWNDGFVSAESDAPAAAAPITAETSSPDNDKEEENDDAAPEVK----------KNLIHKAFIAGGIQLRPRE 275
BLAST of mRNA_F-serratus_M_contig1094.869.1 vs. uniprot
Match: A0A6H5K3J2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3J2_9PHAE) HSP 1 Score: 74.7 bits (182), Expect = 7.580e-11 Identity = 68/176 (38.64%), Postives = 89/176 (50.57%), Query Frame = 3 Query: 408 EISAARKVESK------IEPHDSDRIYKVAARNLLENHGVPSMTFDKLTRTLDLLELGPGRLVKQGLAPKTKYE-RVPPGDQEAEEDIAPMIGADMGLMAVEVDAEEEDAKEHNHNLVEDEADKSSLEEKGGD---GAMEIRDPKKQFNRGPKMPIHAVLDAAGIKLHSREVSPLL 905 +IS A+ V +K +EP+ +YK AARNL E HGVPSMT L +T+ LL+L PGRLV QGLAPK E + GD EVD E+ D +N V D+++ +S + G D + +D K PIHAV AAG++L RE PLL Sbjct: 28 DISMAKCVTNKPSCKRAVEPNPL--LYKAAARNLCEYHGVPSMTAGGLEKTMVLLQLRPGRLVAQGLAPKQLLEGKSAAGDAXX---XXXXXXXXXXXXXXEVDPEQAD-----NNQVSDDSNTNSRD--GTDIEHDHVATQDSIDIETGASKHPIHAVFVAAGVQLRPRETRPLL 191
BLAST of mRNA_F-serratus_M_contig1094.869.1 vs. uniprot
Match: A0A6H5JCG1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCG1_9PHAE) HSP 1 Score: 67.4 bits (163), Expect = 5.090e-8 Identity = 59/151 (39.07%), Postives = 75/151 (49.67%), Query Frame = 3 Query: 465 IYKVAARNLLENHGVPSMTFDKLTRTLDLLELGPGRLVKQGLAPKTKYERVPPGDQEAEEDIAPMIGADMGLMAVEVDAEEEDAK-EHNHNLVEDEADKSSLEEKGGDGAMEIRDPKKQFN---RGPKMPIHAVLDAAGIKLHSREVSPLL 905 ++K AARNL E HGVPS+T L T+ LLEL P RLV QGLAPK + G+ A + AD + +AEEE A + +H+L SS GGD + + R K PI AV A G++L RE PLL Sbjct: 41 MFKAAARNLREYHGVPSITPGGLETTMVLLELRPARLVAQGLAPKILLK----GNSTAG------VDADSTDGSGGFEAEEEQANNQFSHDL-------SSNSSDGGDTGNDNIVTQNSIGFEARASKHPIQAVFVAVGVQLRPRETRPLL 174
BLAST of mRNA_F-serratus_M_contig1094.869.1 vs. uniprot
Match: A0A6H5KI70_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI70_9PHAE) HSP 1 Score: 62.8 bits (151), Expect = 1.170e-7 Identity = 33/58 (56.90%), Postives = 39/58 (67.24%), Query Frame = 3 Query: 426 KVESKIEPHDSDRIYKVAARNLLENHGVPSMTFDKLTRTLDLLELGPGRLVKQGLAPK 599 K K+ + +YK AARNL E HGVPSMT L +T+ LL+L PGRLV QGLAPK Sbjct: 40 KPSCKLTGESNPLLYKAAARNLREYHGVPSMTAGGLEKTMVLLQLRPGRLVAQGLAPK 97 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1094.869.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1094.869.1 >prot_F-serratus_M_contig1094.869.1 ID=prot_F-serratus_M_contig1094.869.1|Name=mRNA_F-serratus_M_contig1094.869.1|organism=Fucus serratus male|type=polypeptide|length=376bp MTCARSVKIKFQGKSRDVTLPLHMPPTLAGLQAAVSSIFRADLPPRSTEVback to top mRNA from alignment at F-serratus_M_contig1094:223704..229716- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1094.869.1 ID=mRNA_F-serratus_M_contig1094.869.1|Name=mRNA_F-serratus_M_contig1094.869.1|organism=Fucus serratus male|type=mRNA|length=6013bp|location=Sequence derived from alignment at F-serratus_M_contig1094:223704..229716- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1094:223704..229716- >mRNA_F-serratus_M_contig1094.869.1 ID=mRNA_F-serratus_M_contig1094.869.1|Name=mRNA_F-serratus_M_contig1094.869.1|organism=Fucus serratus male|type=CDS|length=2256bp|location=Sequence derived from alignment at F-serratus_M_contig1094:223704..229716- (Fucus serratus male)back to top |