mRNA_F-serratus_M_contig105.527.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig105.527.1 vs. uniprot
Match: A0A6H5KX44_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KX44_9PHAE) HSP 1 Score: 355 bits (911), Expect = 1.040e-113 Identity = 160/250 (64.00%), Postives = 197/250 (78.80%), Query Frame = 1 Query: 73 PAPSTPNILWWTESRTEEDAAFNRVVNAGFISSVVLFAIVTIFTIDTEISRGWTAGEVILRIPVDNWLAYTSVLRDNPVLVKACTSGIVYTLGDWTAQTFEGTALESIKRDRVARSAVAGLLLHGPLSHVWYDLCERMFDFIDWNDFWWVAAPKVVVDQILWGPFWNAVYIWFVGTLKGDSFETNREAVVTTALPLVIAGIRLWPLAHLVTYGVIPTENRLLWVDFVEIIWVTILSRQAAEQARANDEPD 822 P P TP+ILWWT++R EE+ N NAGF++ V LF I +F +++E+SRGWT GE ILR+P+DNW Y+ +LR +PV VKACTSGIVY LGD AQ+ EGT L I+R RV RSA+AGLLLHGPLSHVWY++CE +FD + WN++WWV APK++ DQ+LWGP WNAVYI F+G L DS EA+ +TALPLVIAGIRLWPLAH+VTYG++P ENRLLWVD VEI+WVTILS QAAEQAR+ E + Sbjct: 91 PKPYTPSILWWTKNREEENKKLNLFANAGFLAGVALFTIAVVFGVNSEVSRGWTIGEYILRVPLDNWDGYSEMLRQSPVQVKACTSGIVYALGDLVAQSMEGTELAEIERQRVVRSAMAGLLLHGPLSHVWYNVCEGLFDIVGWNEYWWVPAPKIITDQLLWGPAWNAVYIAFLGVLNKDSSAVIWEAITSTALPLVIAGIRLWPLAHVVTYGLVPKENRLLWVDAVEIVWVTILSSQAAEQARSPAEQE 340
BLAST of mRNA_F-serratus_M_contig105.527.1 vs. uniprot
Match: A0A836C8Z2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8Z2_9STRA) HSP 1 Score: 304 bits (779), Expect = 2.130e-94 Identity = 140/253 (55.34%), Postives = 180/253 (71.15%), Query Frame = 1 Query: 88 PNILWWTESRTEEDAAFNRVVNAGFISSVVLFAIVTIFTIDTEISRGWTAGEVILRIPVDNWLAYTSVLRDNPVLVKACTSGIVYTLGDWTAQTFEGTALESIKRDRVARSAVAGLLLHGPLSHVWYDLCERMFDFIDWNDFWWVAAPKVVVDQILWGPFWNAVYIWFVGTLKGDSFETNREAVVTTALPLVIAGIRLWPLAHLVTYGVIPTENRLLWVDFVEIIWVTILSRQAAEQARANDEPDGESAAAGE 846 P +LWW +S EED N +VN+GF+ +V++ V + + + SRGWTA EV+LR+P DNW Y +LR +PVLVKA TSG VY LGDWTAQT GT L + R RVARSA AG + HGPLSH WY++CE +F I WN WWV PK++ DQ++WGP WNA Y+ VG +K D+ EAV +T +PLV++G++LWP HLVTYG+IP ENRLLWVD VEI+WVTILS+QAA++A+ D+P AA E Sbjct: 43 PKLLWWCKSEMEEDREVNFLVNSGFLIAVIVTVAVRLASSTLDASRGWTAEEVLLRLPQDNWQGYMDMLRSHPVLVKAVTSGTVYALGDWTAQTTNGTPLAELDRWRVARSAAAGFVGHGPLSHCWYEVCEALFSAIGWNGAWWVTLPKIMTDQLVWGPIWNATYVVLVGLMKRDAPARVWEAVTSTMVPLVVSGLKLWPAVHLVTYGLIPPENRLLWVDTVEILWVTILSKQAADEAK-RDQPLSTDTAADE 294
BLAST of mRNA_F-serratus_M_contig105.527.1 vs. uniprot
Match: W7TQH1_9STRA (Peroxisomal membrane 22 kDa (Mpv17 pmp22) family protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQH1_9STRA) HSP 1 Score: 251 bits (640), Expect = 1.670e-72 Identity = 119/249 (47.79%), Postives = 159/249 (63.86%), Query Frame = 1 Query: 61 LSDDPAPSTPNILW-----WTESRTEEDAAFNRVVNAGFISSVVLFAIVTIFTIDTEISRGWTAGEVILRIPVDNWLAYTSVLRDNPVLVKACTSGIVYTLGDWTAQTFEGTALESIKRDRVARSAVAGLLLHGPLSHVWYDLCERMFDFIDWNDFWWVAAPKVVVDQILWGPFWNAVYIWFVGTLKGDSFETNREAVVTTALPLVIAGIRLWPLAHLVTYGVIPTENRLLWVDFVEIIWVTILSRQAA 792 LS+ A TP L + ++ + N ++N G IS+V + + T+D ++ RGWT E+ RIP+DNW Y +VL +PV VKA TSG VYTLGD AQ +EG L I R RVARS +AG + HGPLSH WY + E F ++ W WW PK+ VDQ++W P WN YI+ +G +K ++ V +T+ L+ +G++LWPLAH+VTYGVIP ENRLLWVD VEI+WVTILSR+AA Sbjct: 93 LSEHDAADTPRSLQERVRLFAATKGVDSRQLNFLLNVGLISAVAALVLAKVVTVDLDVWRGWTPAEIFTRIPLDNWDGYMNVLSLHPVFVKAVTSGSVYTLGDGVAQLYEGKTLGEIDRGRVARSGIAGFVGHGPLSHWWYGVSEDFFGWLGWEG-WWTTFPKITVDQLVWSPIWNGCYIFLLGAMKREALGEIVNTVKSTSFSLITSGLKLWPLAHVVTYGVIPVENRLLWVDLVEILWVTILSREAA 340
BLAST of mRNA_F-serratus_M_contig105.527.1 vs. uniprot
Match: B7G9T7_PHATC (Predicted protein (Fragment) n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G9T7_PHATC) HSP 1 Score: 242 bits (617), Expect = 8.060e-72 Identity = 111/217 (51.15%), Postives = 147/217 (67.74%), Query Frame = 1 Query: 145 VVNAGFISSVVLFAIVTIFTIDTEISRGWTAGEVILRIPVDNWLAYTSVLRDNPVLVKACTSGIVYTLGDWTAQTFEGTALESIKRDRVARSAVAGLLLHGPLSHVWYDLCERMFDFIDWNDFWWVAAPKVVVDQILWGPFWNAVYIWFVGTLKGDSFETNREAVVTTALPLVIAGIRLWPLAHLVTYGVIPTENRLLWVDFVEIIWVTILSRQAAE 795 ++N GFI VV + I T+D ISRGWT+ E+ RIP+D W Y+ VL ++PV KA TS VYT+GD+ AQ +G A+ + R R+ RS +AGL+ HGPLSH WY++C+ FD + WW PKVVVDQ WGP WN YI +G +K + ET + T +PL+++G++LWPLAH VTYG++P ENRLLWVD VEI+WVTIL+ AAE Sbjct: 1 MINTGFIVGVVGVLLYEITTMDATISRGWTSEELAARIPMDVWAGYSQVLENSPVATKAATSATVYTIGDFIAQRTQGAAMGDLDRGRIVRSMLAGLIGHGPLSHFWYNVCDHFFDNVLHWTAWWSFFPKVVVDQTTWGPIWNNTYILLLGLMKLEKLETIWSDMKRTTVPLILSGLKLWPLAHCVTYGLVPVENRLLWVDAVEILWVTILATTAAE 217
BLAST of mRNA_F-serratus_M_contig105.527.1 vs. uniprot
Match: A0A7S1VV68_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VV68_9STRA) HSP 1 Score: 243 bits (621), Expect = 9.420e-71 Identity = 110/218 (50.46%), Postives = 148/218 (67.89%), Query Frame = 1 Query: 139 NRVVNAGFISSVVLFAIVTIFTIDTEISRGWTAGEVILRIPVDNWLAYTSVLRDNPVLVKACTSGIVYTLGDWTAQTFEGTALESIKRDRVARSAVAGLLLHGPLSHVWYDLCERMFDFIDWNDFWWVAAPKVVVDQILWGPFWNAVYIWFVGTLKGDSFETNREAVVTTALPLVIAGIRLWPLAHLVTYGVIPTENRLLWVDFVEIIWVTILSRQAA 792 N +N G I V L + + T+D ++ RGWTA E + RI +DNW Y+ +L P+ KA TS VY +GD AQ EG ++ + R R RS +AGL+ HGPLSHVWYD+ E +F + WN+ WW PKV+VDQ+ WGPFWN +YI +G +K +S+ET + T +PL+++G++LWPLAH VTYG+IP ENRLLWVD VEI WVTIL+ QA+ Sbjct: 107 NETINTGLIVLVALGVLARVGTVDQDMMRGWTAAESLTRISLDNWADYSEILNAAPLQTKAITSATVYAIGDIIAQRTEGVSMGELDRPRTLRSLLAGLIGHGPLSHVWYDVSEELFTALHWNE-WWGFFPKVMVDQLTWGPFWNNMYIVLLGIMKMESWETMWGDIKRTTVPLIVSGLKLWPLAHCVTYGLIPVENRLLWVDVVEIAWVTILASQAS 323
BLAST of mRNA_F-serratus_M_contig105.527.1 vs. uniprot
Match: A0A7S2HYH1_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HYH1_9STRA) HSP 1 Score: 238 bits (608), Expect = 5.620e-69 Identity = 107/219 (48.86%), Postives = 148/219 (67.58%), Query Frame = 1 Query: 139 NRVVNAGFISSVVLFAIVTIFTIDTEISRGWTAGEVILRIPVDNWLAYTSVLRDNPVLVKACTSGIVYTLGDWTAQTFEGTALESIKRDRVARSAVAGLLLHGPLSHVWYDLCERMFD-FIDWNDFWWVAAPKVVVDQILWGPFWNAVYIWFVGTLKGDSFETNREAVVTTALPLVIAGIRLWPLAHLVTYGVIPTENRLLWVDFVEIIWVTILSRQAA 792 N +N + +V++ + + ++D ++RGWT EV RIP+DNW +Y++VL D P+ KA TS VYT+GD AQ EG ++ + R R+ RS +AGL+ HGPLSH WYD E FD + W + WW PKV++DQ WGPFWN YI +G +K D +E + T +PLV++G++LWPLAH VTYG++P ENRLLWVD VEI+WVTIL+ QA+ Sbjct: 99 NSFINTAVVIAVLVALLSKVASVDAGLTRGWTPEEVAARIPMDNWSSYSAVLEDAPISTKAITSASVYTIGDVIAQRTEGNSMGDLDRPRILRSLLAGLIGHGPLSHFWYDYSEAFFDDVLKWTE-WWSFFPKVILDQTTWGPFWNNTYIILLGAMKLDKWENIWGDIKRTTIPLVVSGLKLWPLAHCVTYGLVPVENRLLWVDLVEIVWVTILATQAS 316
BLAST of mRNA_F-serratus_M_contig105.527.1 vs. uniprot
Match: A0A6V2I5L6_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2I5L6_9STRA) HSP 1 Score: 235 bits (599), Expect = 1.210e-67 Identity = 109/235 (46.38%), Postives = 154/235 (65.53%), Query Frame = 1 Query: 115 RTEEDAAFNRVVNA----GFISSVVLFAIVT-----IFTIDTEISRGWTAGEVILRIPVDNWLAYTSVLRDNPVLVKACTSGIVYTLGDWTAQTFEGTALESIKRDRVARSAVAGLLLHGPLSHVWYDLCERMFDFIDWNDFWWVAAPKVVVDQILWGPFWNAVYIWFVGTLKGDSFETNREAVVTTALPLVIAGIRLWPLAHLVTYGVIPTENRLLWVDFVEIIWVTILSRQAA 792 +T++ F ++A GFI++ V+ A++T + ++D ++RGWT E+ RIP+DNW+ Y+S L ++P+ KA TS VYT+GD AQ EG + + R R+ RS +AGL+ HGP+SH WY+ E FD + WW PKV +DQ WGP WN YI +G +K DS+E + T +PL+++G++LWPLAH VTYG+IP ENRLLWVD VEIIWVTIL+ QA+ Sbjct: 81 QTQQQVGFFSNISAKDINGFINTAVVVAVLTALVFKVTSVDAGLTRGWTPEEIATRIPIDNWIGYSSTLHNSPISTKAITSASVYTIGDVIAQKTEGAGMGELDRPRIIRSLLAGLIGHGPMSHFWYEYSEDFFDNVLHLTEWWSFFPKVAIDQATWGPLWNNTYILLLGLMKLDSWERIWGDMKRTTIPLIVSGLKLWPLAHCVTYGLIPVENRLLWVDLVEIIWVTILANQAS 315
BLAST of mRNA_F-serratus_M_contig105.527.1 vs. uniprot
Match: A0A7S2PLY5_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PLY5_9STRA) HSP 1 Score: 233 bits (594), Expect = 3.660e-67 Identity = 108/221 (48.87%), Postives = 146/221 (66.06%), Query Frame = 1 Query: 136 FNRVVNAGFISSVVLFAIVTIFTIDTEISRGWTAGEVILRIPVDNWLAYTSVLRDNPVLVKACTSGIVYTLGDWTAQTFEGTALESIKRDRVARSAVAGLLLHGPLSHVWYDLCERMF-DFIDWNDFWWVAAPKVVVDQILWGPFWNAVYIWFVGTLKGDSFETNREAVVTTALPLVIAGIRLWPLAHLVTYGVIPTENRLLWVDFVEIIWVTILSRQAAE 795 +N +N G I+ V + A+ + T+D + RGWTA E+ +RIPVDNW +Y S+L P+ KA TS VYT+GD AQ EG + + R RV RS +AG + HGPLSHVWYD E +F + W + WW PKV +DQ+ WGPFWN YI +G ++ + + T +PL+++G++LWPLAH VTYG++P ENRLLWVD VEI+WVTIL+ AAE Sbjct: 87 YNAYINIGVIAIVTVLALSKLATVDMGMMRGWTAAEMAVRIPVDNWASYESILHAAPISTKAVTSATVYTIGDIIAQRTEGKSYGDLDRWRVLRSLLAGCIGHGPLSHVWYDWSEDVFTEQFHWTE-WWSFFPKVAIDQMTWGPFWNNTYILLLGIMQFRPLKDIWTEIKETTVPLIVSGLKLWPLAHCVTYGLVPVENRLLWVDLVEIVWVTILASAAAE 306
BLAST of mRNA_F-serratus_M_contig105.527.1 vs. uniprot
Match: A0A8J5X504_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X504_DIALT) HSP 1 Score: 229 bits (584), Expect = 1.350e-65 Identity = 107/225 (47.56%), Postives = 143/225 (63.56%), Query Frame = 1 Query: 139 NRVVNAGFISSVVLFAIVTIFTIDTEISRGWTAGEVILRIPVDNWLAYTSVLRDNPVLVKACTSGIVYTLGDWTAQTFEGTALESIKRDRVARSAVAGLLLHGPLSHVWYDLCERMFDFIDWNDFWWVAAPKVVVDQILWGPFWNAVYIWFVGTLKGDSFETNREAVVTTALPLVIAGIRLWPLAHLVTYGVIPTENRLLWVDFVEIIWVTILSRQAAEQARAND 813 N +N ++ VVL +V + T+D EISRGWT E++ R+P DNW YTS L +PVL KA TSG VY LGD AQ+ EG L + R R RS++ G LHGPLSH+WY ER+FD + W W+ K++ DQ+ WG WNA+YI +G G + T + + T PL+ G++LW AH++TYGV+P ENRLLWVD VEI+WV ILS A+ +A + Sbjct: 104 NAALNFAGLAVVVLAVVVKLLTVDAEISRGWTWFEIVSRLPSDNWSDYTSFLTASPVLTKAITSGTVYALGDILAQSTEGKGLADLDRVRTVRSSLCGFTLHGPLSHLWYIFAERLFDLLHWGA-WYFVPLKILTDQLTWGALWNALYIAAIGLTSGRALPTIQGEIKETVFPLIRDGLKLWCPAHMITYGVVPIENRLLWVDLVEILWVVILSTTASASKQARE 327
BLAST of mRNA_F-serratus_M_contig105.527.1 vs. uniprot
Match: A0A7S2LHE2_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LHE2_9STRA) HSP 1 Score: 228 bits (580), Expect = 5.770e-65 Identity = 100/229 (43.67%), Postives = 145/229 (63.32%), Query Frame = 1 Query: 139 NRVVNAGFISSVVLFAIVTIFTIDTEISRGWTAGEVILRIPVDNWLAYTSVLRDNPVLVKACTSGIVYTLGDWTAQTFEGTALESIKRDRVARSAVAGLLLHGPLSHVWYDLCERMFD-FIDWNDFWWVAAPKVVVDQILWGPFWNAVYIWFVGTLKGDSFETNREAVVTTALPLVIAGIRLWPLAHLVTYGVIPTENRLLWVDFVEIIWVTILSRQAAEQARANDEPD 822 N ++N + ++ + + +++ I RGW+ E+ R+P+DNW +Y ++L P+ K+ TS VY +GD AQ EGT + + R R+ RS AGL+ HGPLSH WY + E F+ + W D WW PKVV+DQ LWGPFWN YI +G ++ + T +PLV++G++LWPLAH +TYG++P ENRLLWVD VEI+WVTIL+ QAA +N+ P+ Sbjct: 104 NTIINTSIFAIALVTVVFQVLSVNVGIIRGWSTEEIAYRVPLDNWNSYNAILAAAPIQTKSITSATVYAIGDTIAQRTEGTEIGELDRGRIGRSLAAGLIGHGPLSHFWYQISEDFFNNVLMWTD-WWSFIPKVVIDQTLWGPFWNNSYIVLLGVMQFQKPSQVWADIKRTTIPLVVSGLKLWPLAHCITYGLVPVENRLLWVDMVEIVWVTILATQAAGSVESNEAPE 331 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig105.527.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig105.527.1 >prot_F-serratus_M_contig105.527.1 ID=prot_F-serratus_M_contig105.527.1|Name=mRNA_F-serratus_M_contig105.527.1|organism=Fucus serratus male|type=polypeptide|length=129bp MFDFIDWNDFWWVAAPKVVVDQILWGPFWNAVYIWFVGTLKGDSFETNREback to top mRNA from alignment at F-serratus_M_contig105:844079..851513- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig105.527.1 ID=mRNA_F-serratus_M_contig105.527.1|Name=mRNA_F-serratus_M_contig105.527.1|organism=Fucus serratus male|type=mRNA|length=7435bp|location=Sequence derived from alignment at F-serratus_M_contig105:844079..851513- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig105:844079..851513- >mRNA_F-serratus_M_contig105.527.1 ID=mRNA_F-serratus_M_contig105.527.1|Name=mRNA_F-serratus_M_contig105.527.1|organism=Fucus serratus male|type=CDS|length=774bp|location=Sequence derived from alignment at F-serratus_M_contig105:844079..851513- (Fucus serratus male)back to top |