mRNA_F-serratus_M_contig105.514.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig105.514.1 vs. uniprot
Match: D8LKF9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKF9_ECTSI) HSP 1 Score: 253 bits (647), Expect = 6.110e-70 Identity = 254/654 (38.84%), Postives = 306/654 (46.79%), Query Frame = 3 Query: 639 AGILFASLEPQPVTIDHWARGWVVSRSTLAGDSSRSYLERSGTRDELSSIGS--RSLCSTKSAPALSRVRGRSLYQSSRKRVRRS---EGKKAVPFSLGPDPREDQGLPPTALP------------SRDARG--------VGAGNNGGGFTDGFGNIPGSHVGGIFDDG----------FVAWLEELEGREWTIDGAGELLIVDRPGLGGKNRPKRVISAFYKFRDV---IGSAQDMGVPVGSENASRLGGSK----GSDRQRKRAE-SSPLLLSKSRSLSSTASRRNSTRRSSRQHLS---REAERFFALEPTLQPNLTNSVDQPGPGVSVCDGSLSRKGPSWPQDPNHMSRGEYRQRKRADDFGATAHSMGEEGDTGKSYLGFSVGTVQSAPELVGGLDKKLGENRGGGGGSATRDSRARNSGRTGRVGLNQ-VHRGDSFSTFDDVNPLKGATKMPSSSTSSPRREPIGDERDGYGDVRGDLSLFSTPVYEDESL---GEGPEAGS----------------GYGHVGQGFQKQTGQLPKVKDKLRERLLAHERLQTHSSRDLRRVTARIQPHVSPKVKTNSPP-CNSYGSRAEDGGDVGSSTRGAFSSFPPLSRSLSGCGMSGGGHDHSVD*GTSSSPGGGRGGSEMLVIS 2399 AG LF S EP+ ID WARGWV SR T D R R + D+ S G RS+ ST + + G +R R S E VPF L P+ REDQ LPPT +P SR RG GA GG G G S G ++D G + L++L GREWTIDGAGELLIVDR + G PK V+SA Y FRDV + ++ G V L G K GS + R S SK R SS + RR S R + FF LEPTLQPNL NS+D+PGPGVSV DG ++GPSWPQDP HMSR EYR+R+R D T SM + G+ S LGFS+G+VQSAP L G L L N GGG RD V RG S + F+DVNP G ++ +SP G G RGDLS + V G GPE+ S +G +G K+ G LPKVK RER L HER T + RD R V AR HVSPK T+S CN+ + GD G ST+ SSFP L SL+G G GGG G P G+ G M+ ++ Sbjct: 2 AGTLFPSPEPETPPIDRWARGWVASRRTTVRDWDR--FPRGSSSDDGSEGGRSLRSVRSTATGMTSAHRHGXXXXXHARHRPHSSSCKEDSSGVPFPLAPEVREDQSLPPT-IPGHSVRMSRKGGDSRAKRGRGGHCAKRTGANRGEGGRRQGSGGE--SESGCLWDGGTDGSDRQEDDLDSRLKDLGGREWTIDGAGELLIVDR--VQGDAMPKTVVSALYNFRDVRDKLAGGENGGGGVXXXXXXXLDGGKRHRDGSGVGKTRGSISGSASFSKERKRSSLSLRRASRXXXXXXXXXXRRRGSGAFFELEPTLQPNLANSLDRPGPGVSVSDGGSLKEGPSWPQDPEHMSRSEYRERQRRQDL--TGSSMLDGGEDASS-LGFSLGSVQSAPALRG-LGLGLNGNAAAGGG---RDGGXXXXXXXXXXXXXXGVGRGTSITAFEDVNPFAGGIRV----DTSPPAGGDGRGAAGASGTRGDLSPLTASVGGQSGSFFPGAGPESSSVGETSDDPHLALVKDPDWGRNVRGSPKEAGYLPKVKQVSRERPLTHERPYTRNPRDPRNVPARPNAHVSPKNSTSSRVGCNAD---PQYTGDDGGSTK---SSFPSLPMSLTGWGEGGGGGSLGKGGGVPGRPMRGKKGRGMITMT 631 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig105.514.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig105.514.1 >prot_F-serratus_M_contig105.514.1 ID=prot_F-serratus_M_contig105.514.1|Name=mRNA_F-serratus_M_contig105.514.1|organism=Fucus serratus male|type=polypeptide|length=690bp MAPRKGTRVPTCSASPRGLFDRASRFLQTSSREQEGAVSDAIEVVVRDALback to top mRNA from alignment at F-serratus_M_contig105:416536..423283+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig105.514.1 ID=mRNA_F-serratus_M_contig105.514.1|Name=mRNA_F-serratus_M_contig105.514.1|organism=Fucus serratus male|type=mRNA|length=6748bp|location=Sequence derived from alignment at F-serratus_M_contig105:416536..423283+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig105:416536..423283+ >mRNA_F-serratus_M_contig105.514.1 ID=mRNA_F-serratus_M_contig105.514.1|Name=mRNA_F-serratus_M_contig105.514.1|organism=Fucus serratus male|type=CDS|length=4140bp|location=Sequence derived from alignment at F-serratus_M_contig105:416536..423283+ (Fucus serratus male)back to top |