prot_F-serratus_M_contig998.21262.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig998.21262.1
Unique Nameprot_F-serratus_M_contig998.21262.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length497
Homology
BLAST of mRNA_F-serratus_M_contig998.21262.1 vs. uniprot
Match: A0A0P1B2K8_PLAHL (Animal inward rectifier k channel (Irk-c) family protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B2K8_PLAHL)

HSP 1 Score: 85.5 bits (210), Expect = 3.260e-14
Identity = 47/111 (42.34%), Postives = 61/111 (54.95%), Query Frame = 0
Query:    1 MFQIGELRKHQLLEVRVRCYALRHERLTPMASDPKTKPNGGSEGDGFAPDHGAERQQQVYFQCHSMRLQHPDDELGGNLLLVLPQTVVHRIDAWSPMMPPPRWNSTHGLVH 111
            MFQ+ E+RKHQL+E  VR YA+RH+                            E  +  YFQ + MR+QHPDD+LGG +LL LP  VVH +DAWSP++ P   N T G+ H
Sbjct:  205 MFQVCEMRKHQLVEAHVRLYAIRHD---------------------------IEFGEHYYFQSYPMRIQHPDDDLGGMMLLALPSVVVHGMDAWSPLLRPKSIN-TCGMHH 287          
BLAST of mRNA_F-serratus_M_contig998.21262.1 vs. uniprot
Match: A0A5D6YC93_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YC93_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 3.470e-14
Identity = 46/100 (46.00%), Postives = 54/100 (54.00%), Query Frame = 0
Query:    1 MFQIGELRKHQLLEVRVRCYALRHERLTPMASDPKTKPNGGSEGDGFAPDHGAERQQQVYFQCHSMRLQHPDDELGGNLLLVLPQTVVHRIDAWSPMMPP 100
            MFQ  E+RKHQL+E  VR YA+RH+                            E     YFQ H MR+QHPDD+LGG LLL LP  VVHR+DAWSP+  P
Sbjct:  218 MFQACEMRKHQLVEAHVRMYAIRHD---------------------------VEFGTHYYFQSHPMRIQHPDDDLGGMLLLALPSVVVHRMDAWSPLCRP 290          
BLAST of mRNA_F-serratus_M_contig998.21262.1 vs. uniprot
Match: A0A484DZA5_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DZA5_BRELC)

HSP 1 Score: 84.7 bits (208), Expect = 5.820e-14
Identity = 48/111 (43.24%), Postives = 62/111 (55.86%), Query Frame = 0
Query:    1 MFQIGELRKHQLLEVRVRCYALRHERLTPMASDPKTKPNGGSEGDGFAPDHGAERQQQVYFQCHSMRLQHPDDELGGNLLLVLPQTVVHRIDAWSPMMPPPRWNSTHGLVH 111
            MFQ+ E+RKHQL+E  VR YA+RH+                        D G    +  YFQ + MR++HPDD LGG +LL LP  VVH IDAWSP++ P + + T GL H
Sbjct:  208 MFQVCEMRKHQLVEAHVRMYAIRHDL-----------------------DFG----EHYYFQSYPMRIEHPDDNLGGMMLLALPSVVVHSIDAWSPLLRP-KSSDTCGLHH 290          
BLAST of mRNA_F-serratus_M_contig998.21262.1 vs. uniprot
Match: A0A024GH30_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GH30_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 5.850e-14
Identity = 44/99 (44.44%), Postives = 54/99 (54.55%), Query Frame = 0
Query:    1 MFQIGELRKHQLLEVRVRCYALRHERLTPMASDPKTKPNGGSEGDGFAPDHGAERQQQVYFQCHSMRLQHPDDELGGNLLLVLPQTVVHRIDAWSPMMP 99
            M Q+ E+RKHQL+E  VR YA+RH+                               Q  YFQ + MR+QHPDD++GG LLL LP  VVHRIDAWSP+ P
Sbjct:  219 MIQVCEMRKHQLVEAHVRMYAIRHDHFYG---------------------------QPYYFQSYPMRVQHPDDDIGGMLLLALPSVVVHRIDAWSPLFP 290          
BLAST of mRNA_F-serratus_M_contig998.21262.1 vs. uniprot
Match: F0Y0L0_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y0L0_AURAN)

HSP 1 Score: 80.9 bits (198), Expect = 2.530e-13
Identity = 47/110 (42.73%), Postives = 57/110 (51.82%), Query Frame = 0
Query:    1 MFQIGELRKHQLLEVRVRCYALRHERLTPMASDPKTKPNGGSEGDGFAPDHGAERQQQVYFQCHSMRLQHPDDELGGNLLLVLPQTVVHRIDAWSPMMPPPRWNSTHGLV 110
            MFQ+ E+R HQL+E  VRCYA+R E      + P                          FQ  +MRL  PDDELGG L L LP  VVHR+DAWSP++PP    S H +V
Sbjct:  138 MFQVVEMRSHQLIEGHVRCYAVRDETDARGRAAP--------------------------FQQCAMRLDKPDDELGGWLFLALPSVVVHRLDAWSPLVPPAPRASGHEIV 221          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig998.21262.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0P1B2K8_PLAHL3.260e-1442.34Animal inward rectifier k channel (Irk-c) family p... [more]
A0A5D6YC93_9STRA3.470e-1446.00Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A484DZA5_BRELC5.820e-1443.24Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
A0A024GH30_9STRA5.850e-1444.44Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]
F0Y0L0_AURAN2.530e-1342.73Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013518Potassium channel, inwardly rectifying, Kir, cytoplasmicGENE3D2.60.40.1400coord: 411..488
e-value: 6.1E-21
score: 76.7
IPR013518Potassium channel, inwardly rectifying, Kir, cytoplasmicGENE3D2.60.40.1400coord: 1..106
e-value: 8.4E-14
score: 53.3
IPR041647Inward rectifier potassium channel, C-terminalPFAMPF17655IRK_Ccoord: 418..481
e-value: 9.0E-14
score: 51.5
NoneNo IPR availablePANTHERPTHR11767:SF103coord: 405..488
NoneNo IPR availablePANTHERPTHR11767:SF103coord: 1..107
IPR016449Potassium channel, inwardly rectifying, KirPANTHERPTHR11767INWARD RECTIFIER POTASSIUM CHANNELcoord: 1..107
IPR016449Potassium channel, inwardly rectifying, KirPANTHERPTHR11767INWARD RECTIFIER POTASSIUM CHANNELcoord: 405..488
IPR014756Immunoglobulin E-setSUPERFAMILY81296E set domainscoord: 418..484

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig998contigF-serratus_M_contig998:308765..314909 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig998.21262.1mRNA_F-serratus_M_contig998.21262.1Fucus serratus malemRNAF-serratus_M_contig998 308765..315759 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig998.21262.1 ID=prot_F-serratus_M_contig998.21262.1|Name=mRNA_F-serratus_M_contig998.21262.1|organism=Fucus serratus male|type=polypeptide|length=497bp
MFQIGELRKHQLLEVRVRCYALRHERLTPMASDPKTKPNGGSEGDGFAPD
HGAERQQQVYFQCHSMRLQHPDDELGGNLLLVLPQTVVHRIDAWSPMMPP
PRWNSTHGLVHWGLHSDRGAIRCRCEDPPRTRQNSLSMSVAAASAVAAGS
RRSATAKTVLAAARLTSRTLRQEDKSRVGAREREKACQGLRLTSHLSSQS
LSLGLQGIKDADLRAHLTRNDTKYKNYWEETAISESATAGSERGVDGGAT
DRVGYVHRFPDLLKRWDDVDGDRGTWYEVMKRRMVRVEAERRKEEACRAE
RAAAESSFAAAKFSRTKSRRRRGDRRPSIMKIEDVSVFPVKSGVGGLNHL
EKYPEDVAARASNLEERKQADAPPQSRSPESAPPGLARMSSAGRTSSATL
SAAQWFAREERKAIDAFLQDRELEVVVILEGTDTATGSTVQARHSYCWEN
IQWNRTFASCVTQAEDGACVVDFSKFHDTVRAPEDCFDPGFVQSYA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013518K_chnl_inward-rec_Kir_cyto
IPR041647IRK_C
IPR016449K_chnl_inward-rec_Kir
IPR014756Ig_E-set