prot_F-serratus_M_contig995.21239.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig995.21239.1
Unique Nameprot_F-serratus_M_contig995.21239.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length175
Homology
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BLAST of mRNA_F-serratus_M_contig995.21239.1 vs. uniprot
Match: W2NLQ1_PHYPR (H15 domain-containing protein n=9 Tax=Phytophthora TaxID=4783 RepID=W2NLQ1_PHYPR)

HSP 1 Score: 65.1 bits (157), Expect = 1.630e-9
Identity = 34/67 (50.75%), Postives = 46/67 (68.66%), Query Frame = 0 
Query:    1 MAIEAIKALKERNGSSIQAIKKHITASNPSLNFTPHQMRSALKKGVESGKFVKVKSSYKLSAEAKKP 67
            + ++AIK LKERNGSS QAI K +   N   N+  H +  AL+ GVE+GK +++K SYKLS E +KP
Sbjct:   81 LIVDAIKELKERNGSSRQAIAKVV--ENKKDNYASHHLNKALRTGVEAGKLIQIKGSYKLSPELRKP 145
[Close]
BLAST of mRNA_F-serratus_M_contig995.21239.1 vs. uniprot
Match: A0A2D4BWE3_PYTIN (E1 ubiquitin-activating enzyme n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BWE3_PYTIN)

HSP 1 Score: 65.9 bits (159), Expect = 2.530e-9
Identity = 36/67 (53.73%), Postives = 46/67 (68.66%), Query Frame = 0 
Query:    1 MAIEAIKALKERNGSSIQAIKKHITASNPSLNFTPHQMRSALKKGVESGKFVKVKSSYKLSAEAKKP 67
            + +EAIK LKERNGSS QAI KH++A     NF  H +  AL+  VE+ K V+VK+SYKL+   KKP
Sbjct: 1424 LIVEAIKELKERNGSSRQAIAKHVSAKK--ANFASHFLNKALRTAVENEKLVQVKASYKLAPSLKKP 1488
[Close]
BLAST of mRNA_F-serratus_M_contig995.21239.1 vs. uniprot
Match: A0A225WVS4_9STRA (Histone H1 n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WVS4_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 3.040e-9
Identity = 34/67 (50.75%), Postives = 46/67 (68.66%), Query Frame = 0 
Query:    1 MAIEAIKALKERNGSSIQAIKKHITASNPSLNFTPHQMRSALKKGVESGKFVKVKSSYKLSAEAKKP 67
            + ++AIK LKER+GSS QAI K + A     N+  H +  AL+ GVE+GK +++K SYKLS E KKP
Sbjct:   80 LVVDAIKELKERSGSSRQAIGKVVEAKKN--NYASHHLNKALRTGVEAGKLIQIKGSYKLSPELKKP 144
[Close]
BLAST of mRNA_F-serratus_M_contig995.21239.1 vs. uniprot
Match: D0P4B9_PHYIT (Histone H1, putative n=2 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0P4B9_PHYIT)

HSP 1 Score: 64.3 bits (155), Expect = 3.200e-9
Identity = 33/67 (49.25%), Postives = 46/67 (68.66%), Query Frame = 0 
Query:    1 MAIEAIKALKERNGSSIQAIKKHITASNPSLNFTPHQMRSALKKGVESGKFVKVKSSYKLSAEAKKP 67
            + ++AIK LKERNGSS QAI K +   N   N+  H +  AL+  V++GKF+++K SYKLS E +KP
Sbjct:   84 LIVDAIKELKERNGSSRQAISKIV--ENKKDNYASHHLNKALRTAVDAGKFIQIKGSYKLSPELRKP 148
[Close]
BLAST of mRNA_F-serratus_M_contig995.21239.1 vs. uniprot
Match: A0A6A3F8I3_9STRA (H15 domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3F8I3_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 3.320e-9
Identity = 34/67 (50.75%), Postives = 46/67 (68.66%), Query Frame = 0 
Query:    1 MAIEAIKALKERNGSSIQAIKKHITASNPSLNFTPHQMRSALKKGVESGKFVKVKSSYKLSAEAKKP 67
            + ++AIK LKERNGSS QAI K +   N   N+  H +  AL+  V++GKF++VK SYKLS E +KP
Sbjct:   87 LIVDAIKELKERNGSSRQAIAKVV--ENKKDNYASHHLNKALRTAVDAGKFIQVKGSYKLSPELRKP 151
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig995.21239.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
W2NLQ1_PHYPR1.630e-950.75H15 domain-containing protein n=9 Tax=Phytophthora... [more]
A0A2D4BWE3_PYTIN2.530e-953.73E1 ubiquitin-activating enzyme n=1 Tax=Pythium ins... [more]
A0A225WVS4_9STRA3.040e-950.75Histone H1 n=1 Tax=Phytophthora megakarya TaxID=47... [more]
D0P4B9_PHYIT3.200e-949.25Histone H1, putative n=2 Tax=Phytophthora infestan... [more]
A0A6A3F8I3_9STRA3.320e-950.75H15 domain-containing protein n=4 Tax=Phytophthora... [more]

Pages

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005819Histone H5PRINTSPR00624HISTONEH5coord: 90..104
score: 37.04
coord: 8..25
score: 54.32
coord: 121..138
score: 32.72
coord: 143..162
score: 20.56
IPR005818Linker histone H1/H5, domain H15SMARTSM00526h15plus2coord: 1..57
e-value: 9.7E-13
score: 58.3
IPR005818Linker histone H1/H5, domain H15PFAMPF00538Linker_histonecoord: 1..60
e-value: 8.6E-17
score: 61.3
IPR005818Linker histone H1/H5, domain H15PROSITEPS51504H15coord: 1..62
score: 27.218
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 1..79
e-value: 2.3E-14
score: 54.8
NoneNo IPR availablePANTHERPTHR11467HISTONE H1coord: 3..165
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 1..67

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig995contigF-serratus_M_contig995:96918..115912 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig995.21239.1mRNA_F-serratus_M_contig995.21239.1Fucus serratus malemRNAF-serratus_M_contig995 96918..115915 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig995.21239.1 ID=prot_F-serratus_M_contig995.21239.1|Name=mRNA_F-serratus_M_contig995.21239.1|organism=Fucus serratus male|type=polypeptide|length=175bp
MAIEAIKALKERNGSSIQAIKKHITASNPSLNFTPHQMRSALKKGVESGK
FVKVKSSYKLSAEAKKPPPKAKIVKKKVAPKKTTKKPASAKKPTAKKATT
TKKQPPPKRRRNRRAKKPTAKKATTTKKATTTTKTKKVATAKKPTTAKKP
AATKKAATTKKATTTTKKTVTKKSA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005819Histone_H5
IPR005818Histone_H1/H5_H15
IPR036388WH-like_DNA-bd_sf
IPR036390WH_DNA-bd_sf