prot_F-serratus_M_contig995.21237.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig995.21237.1
Unique Nameprot_F-serratus_M_contig995.21237.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length137
Homology
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BLAST of mRNA_F-serratus_M_contig995.21237.1 vs. uniprot
Match: A0A672K8D0_SINGR (Histone H3 n=2 Tax=Euteleostomi TaxID=117571 RepID=A0A672K8D0_SINGR)

HSP 1 Score: 243 bits (621), Expect = 4.360e-81
Identity = 131/136 (96.32%), Postives = 135/136 (99.26%), Query Frame = 0 
Query:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 136
            MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFK+DLRFQ SAV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER+
Sbjct:    3 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 138
[Close]
BLAST of mRNA_F-serratus_M_contig995.21237.1 vs. uniprot
Match: A0A8C1ET08_CYPCA (Histone H3 n=4 Tax=Euteleostomi TaxID=117571 RepID=A0A8C1ET08_CYPCA)

HSP 1 Score: 243 bits (621), Expect = 4.360e-81
Identity = 131/136 (96.32%), Postives = 135/136 (99.26%), Query Frame = 0 
Query:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 136
            MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFK+DLRFQ SAV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER+
Sbjct:    3 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 138
[Close]
BLAST of mRNA_F-serratus_M_contig995.21237.1 vs. uniprot
Match: A0A3P6TB85_LITSI (Histone domain-containing protein n=2 Tax=Bilateria TaxID=33213 RepID=A0A3P6TB85_LITSI)

HSP 1 Score: 244 bits (623), Expect = 4.370e-81
Identity = 132/136 (97.06%), Postives = 135/136 (99.26%), Query Frame = 0 
Query:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 136
            MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFK+DLRFQ SAVLALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER+
Sbjct:   24 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVLALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 159
[Close]
BLAST of mRNA_F-serratus_M_contig995.21237.1 vs. uniprot
Match: A0A8B9F8D8_9PSIT (Histone H3 n=2 Tax=Amniota TaxID=32524 RepID=A0A8B9F8D8_9PSIT)

HSP 1 Score: 243 bits (621), Expect = 4.510e-81
Identity = 131/136 (96.32%), Postives = 135/136 (99.26%), Query Frame = 0 
Query:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 136
            MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFK+DLRFQ SAV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER+
Sbjct:    4 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 139
[Close]
BLAST of mRNA_F-serratus_M_contig995.21237.1 vs. uniprot
Match: A0A8C7F568_ONCKI (Histone H3 n=2 Tax=Oncorhynchus TaxID=8016 RepID=A0A8C7F568_ONCKI)

HSP 1 Score: 243 bits (621), Expect = 4.510e-81
Identity = 131/136 (96.32%), Postives = 135/136 (99.26%), Query Frame = 0 
Query:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 136
            MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFK+DLRFQ SAV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER+
Sbjct:    4 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 139
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig995.21237.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A672K8D0_SINGR4.360e-8196.32Histone H3 n=2 Tax=Euteleostomi TaxID=117571 RepID... [more]
A0A8C1ET08_CYPCA4.360e-8196.32Histone H3 n=4 Tax=Euteleostomi TaxID=117571 RepID... [more]
A0A3P6TB85_LITSI4.370e-8197.06Histone domain-containing protein n=2 Tax=Bilateri... [more]
A0A8B9F8D8_9PSIT4.510e-8196.32Histone H3 n=2 Tax=Amniota TaxID=32524 RepID=A0A8B... [more]
A0A8C7F568_ONCKI4.510e-8196.32Histone H3 n=2 Tax=Oncorhynchus TaxID=8016 RepID=A... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000164Histone H3/CENP-APRINTSPR00622HISTONEH3coord: 34..55
score: 93.58
coord: 114..135
score: 94.86
coord: 98..114
score: 96.93
coord: 80..98
score: 76.89
coord: 3..17
score: 97.1
coord: 17..31
score: 92.32
coord: 58..75
score: 97.46
IPR000164Histone H3/CENP-ASMARTSM00428h35coord: 34..136
e-value: 3.3E-73
score: 259.2
IPR000164Histone H3/CENP-APANTHERPTHR11426HISTONE H3coord: 1..135
IPR000164Histone H3/CENP-APROSITEPS00322HISTONE_H3_1coord: 15..21
IPR000164Histone H3/CENP-APROSITEPS00959HISTONE_H3_2coord: 67..75
IPR009072Histone-foldGENE3D1.10.20.10coord: 2..136
e-value: 3.7E-79
score: 265.2
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 2..133
IPR007125Histone H2A/H2B/H3PFAMPF00125Histonecoord: 1..132
e-value: 1.3E-53
score: 180.9
NoneNo IPR availablePANTHERPTHR11426:SF224coord: 1..135

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig995contigF-serratus_M_contig995:31761..32171 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig995.21237.1mRNA_F-serratus_M_contig995.21237.1Fucus serratus malemRNAF-serratus_M_contig995 31761..32171 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig995.21237.1 ID=prot_F-serratus_M_contig995.21237.1|Name=mRNA_F-serratus_M_contig995.21237.1|organism=Fucus serratus male|type=polypeptide|length=137bp
MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALR
EIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAY
LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000164Histone_H3/CENP-A
IPR009072Histone-fold
IPR007125Histone_H2A/H2B/H3