prot_F-serratus_M_contig993.21220.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig993.21220.1
Unique Nameprot_F-serratus_M_contig993.21220.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length424
Homology
BLAST of mRNA_F-serratus_M_contig993.21220.1 vs. uniprot
Match: A0A6L3F7Y4_9CHLR (Endo alpha-1,4 polygalactosaminidase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A6L3F7Y4_9CHLR)

HSP 1 Score: 173 bits (439), Expect = 1.910e-47
Identity = 99/234 (42.31%), Postives = 128/234 (54.70%), Query Frame = 0
Query:  110 WKPGPGVTWXXXXXXXXXXXXXXXMYNIDLFDVNEAEIEELREREVVVICSFSAGTYEEERADTDDFDVSWLGNEVPDADGDLWLNITHDGVMS-IMEGRLNLAVNKSCDGVEPSNVQVYLEEDSGFNISANDQLVYNSWLADEAHARNLSVGLRNDWPQVEALEPSFDWALSEDCLYRGECDAYRTNFEVAEKAVLDAEYFQFDLSFCENVTALGLSVIIKDLSLDSRRCSCQ 342
            W+P PGV+W               MY+IDLFD  ++ I+ L E   +VIC FSAG+YE  R+D   F  S LGN +     + WL++     +  IM  RL+LAV+K CDGVEP N+  Y   DSGF ++  DQL YN WLA  AH RNLS+GL+ND  Q+  L   +DWAL+E C    EC+  R  F  A KAV   EY      FC     L    ++K+L L   R SC+
Sbjct:   60 WQPSPGVSWQWQLTGEIDTSFDVEMYDIDLFDTPQSTIDLLHENGRIVICYFSAGSYENWRSDAGQFPASVLGNTLDGWPDERWLDVRAISQLEPIMMARLDLAVSKGCDGVEPDNMDGY-SNDSGFPLTGQDQLDYNIWLASAAHDRNLSIGLKNDLDQIPDLVSYYDWALNEQCYQYNECELLRP-FTNAGKAVFGVEYQGNSAQFCPYFNNLDFDWLLKELDLGPTRTSCR 291          
BLAST of mRNA_F-serratus_M_contig993.21220.1 vs. uniprot
Match: A0A150SSH0_SORCE (Endo alpha-1,4 polygalactosaminidase n=3 Tax=Sorangium cellulosum TaxID=56 RepID=A0A150SSH0_SORCE)

HSP 1 Score: 171 bits (434), Expect = 1.940e-47
Identity = 104/232 (44.83%), Postives = 131/232 (56.47%), Query Frame = 0
Query:  112 PGPGVTWXXXXXXXXXXXXXXXMYNIDLFDVNEAEIEELREREVVVICSFSAGTYEEERADTDDFDVSWLGNEVPDADGDLWLNITHDGVMSIMEGRLNLAVNKSCDGVEPSNVQVYLEEDSGFNISANDQLVYNSWLADEAHARNLSVGLRNDWPQVEALEPSFDWALSEDCLYRGECDAYRTNFEVAEKAVLDAEYFQFDLS--FCENVTALGLSVIIKDLSLDSRRCSC 341
            P PG TW               MY+IDLF+  +A I+ LR     VIC FSAG+ E+ R+D   F  + LGN +    G+ WL+    GV  +M+ RL+LAV K CDGVEP NV  Y    SGF ++A  QL YN +LA EAHAR LS+GL+ND  QV  L   FDWAL+E+C    EC+   T F  A KAV  AEY     +   C +   LGLS +IK L LD+ R +C
Sbjct:    2 PAPGTTWQWQLTGTIDTSLDVAMYDIDLFEAPQATIDALRAAGKKVICYFSAGSSEDWRSDASRFPAAALGNPLDGWPGERWLDTRSAGVRDVMKARLDLAVQKRCDGVEPDNVDGYTNG-SGFPLTAATQLDYNRFLAAEAHARGLSIGLKNDLDQVRDLVGHFDWALNEECHAYDECEML-TPFIRAGKAVFHAEYVAASQANAVCADTKPLGLSTLIKRLDLDAWRVAC 231          
BLAST of mRNA_F-serratus_M_contig993.21220.1 vs. uniprot
Match: UPI001C8393DF (endo alpha-1,4 polygalactosaminidase n=1 Tax=Thermosulfurimonas sp. F29 TaxID=2867247 RepID=UPI001C8393DF)

HSP 1 Score: 171 bits (434), Expect = 2.460e-47
Identity = 101/234 (43.16%), Postives = 128/234 (54.70%), Query Frame = 0
Query:  110 WKPGPGVTWXXXXXXXXXXXXXXXMYNIDLFDVNEAEIEELREREVVVICSFSAGTYEEERADTDDFDVSWLGNEVPDADGDLWLNITH-DGVMSIMEGRLNLAVNKSCDGVEPSNVQVYLEEDSGFNISANDQLVYNSWLADEAHARNLSVGLRNDWPQVEALEPSFDWALSEDCLYRGECDAYRTNFEVAEKAVLDAEYFQFDLSFCENVTALGLSVIIKDLSLDSRRCSCQ 342
            W+P PG +W               ++++DLF+     I EL+ R   VIC FSAG+ E  R D D F    +GN + D   + WL+I   D +  I+  RL+LAV K CDGVEP +V  YL  D+GF I+  DQL YN WL+ EAH R LS+GL+ND  Q E LE  FDWAL E+C   GEC+AYR  F    KAV   EY      FC     LG S + K   LD+ R  C+
Sbjct:    3 WRPAPGTSWQWQLTQPVDVSVEAEVFDVDLFETPPETIAELKRRGRKVICYFSAGSLEPWRPDADAFPEEIIGNPLEDWPEERWLDIRRLDLLAPIVRARLDLAVRKGCDGVEPDDVDGYLH-DTGFPITYGDQLRYNVWLSLEAHKRGLSIGLKNDPEQAEELELFFDWALVEECFEYGECEAYRV-FVRRGKAVFAVEYNLSPEEFCAEAAELGFSALRKRQELDAWRIPCR 234          
BLAST of mRNA_F-serratus_M_contig993.21220.1 vs. uniprot
Match: UPI0009FFA800 (endo alpha-1,4 polygalactosaminidase n=1 Tax=Thermosulfurimonas dismutans TaxID=999894 RepID=UPI0009FFA800)

HSP 1 Score: 177 bits (448), Expect = 2.820e-47
Identity = 103/233 (44.21%), Postives = 126/233 (54.08%), Query Frame = 0
Query:  110 WKPGPGVTWXXXXXXXXXXXXXXXMYNIDLFDVNEAEIEELREREVVVICSFSAGTYEEERADTDDFDVSWLGNEVPDADGDLWLNITH-DGVMSIMEGRLNLAVNKSCDGVEPSNVQVYLEEDSGFNISANDQLVYNSWLADEAHARNLSVGLRNDWPQVEALEPSFDWALSEDCLYRGECDAYRTNFEVAEKAVLDAEYFQFDLSFCENVTALGLSVIIKDLSLDSRRCSC 341
            WKP PG TW               M+++DLF      I+EL  R   VIC FSAGTYE  R D   F    LG  + D   + WL+I   D +  IM+ RL+LAV K CDGVEP NV  Y + DSGF ++  DQL+YN WLA+EAH R LSVGL+ND  Q+  LE  FDWAL+E+C    EC+     F    KAV   EY      FC     +G S + K L LD+ R  C
Sbjct:  199 WKPAPGTTWQWQLTGEIDTSVEAEMFDVDLFGTPVEVIQELHRRGRKVICYFSAGTYEPWRPDASKFSEEVLGKPLKDWPDERWLDIRRLDLLGPIMKARLDLAVEKGCDGVEPDNVDAY-QNDSGFPLTYEDQLLYNRWLAEEAHRRGLSVGLKNDLDQIPDLESYFDWALNEECFSYNECEKLLP-FVNNGKAVFGVEYELDPADFCARANQVGFSFMKKRLDLDAWRLPC 429          
BLAST of mRNA_F-serratus_M_contig993.21220.1 vs. uniprot
Match: UPI0010F86B4F (endo alpha-1,4 polygalactosaminidase n=1 Tax=Chitinivorax sp. B TaxID=2502235 RepID=UPI0010F86B4F)

HSP 1 Score: 182 bits (462), Expect = 5.790e-47
Identity = 99/239 (41.42%), Postives = 133/239 (55.65%), Query Frame = 0
Query:  105 PTEAWWKPGPGVTWXXXXXXXXXXXXXXXMYNIDLFDVNEAEIEELREREVVVICSFSAGTYEEERADTDDFDVSWLGNEVPDADGDLWLNITH-DGVMSIMEGRLNLAVNKSCDGVEPSNVQVYLEEDSGFNISANDQLVYNSWLADEAHARNLSVGLRNDWPQVEALEPSFDWALSEDCLYRGECDAYRTNFEVAEKAVLDAEYFQFDLSFCENVTALGLSVIIKDLSLDSRRCSCQ 342
            PT  WWKP PG +W               M++IDLF+  +A I+ L  +   V+C FSAG++E+ R D D F  + LG  +     + WL+I   + + ++M  RL+LA +K CDGVEP N+  Y    +GF + A DQL YN WLA EAH R LS+GL+ND  Q++ LEP +DWAL+E C    ECD Y+  F  A KAV   EY      FC    A G   + K L LD  R +C+
Sbjct:  568 PTNGWWKPKPGNSWQWQLSGVIDTSVDAQMFDIDLFETPQATIDALHAKGRKVVCYFSAGSFEKGRPDADRFPTTVLGEVLDGWPDERWLDIRQINQLAAVMTKRLDLAASKQCDGVEPDNIDGYTNS-TGFPLKAADQLAYNRWLAQEAHKRGLSIGLKNDVDQIKELEPYYDWALNEQCFQYDECDGYQA-FIKAGKAVFGVEYSGSTSGFCAKANAAGYDWLKKRLELDVYRVACR 804          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig993.21220.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6L3F7Y4_9CHLR1.910e-4742.31Endo alpha-1,4 polygalactosaminidase n=1 Tax=Chlor... [more]
A0A150SSH0_SORCE1.940e-4744.83Endo alpha-1,4 polygalactosaminidase n=3 Tax=Soran... [more]
UPI001C8393DF2.460e-4743.16endo alpha-1,4 polygalactosaminidase n=1 Tax=Therm... [more]
UPI0009FFA8002.820e-4744.21endo alpha-1,4 polygalactosaminidase n=1 Tax=Therm... [more]
UPI0010F86B4F5.790e-4741.42endo alpha-1,4 polygalactosaminidase n=1 Tax=Chiti... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004352Glycoside-hydrolase family GH114, TIM-barrel domainPFAMPF03537Glyco_hydro_114coord: 117..335
e-value: 2.7E-55
score: 187.2
NoneNo IPR availablePANTHERPTHR35273FAMILY NOT NAMEDcoord: 107..343
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 111..367
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 368..390
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..92
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 93..110
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 391..423
NoneNo IPR availableTMHMMTMhelixcoord: 368..390
IPR017853Glycoside hydrolase superfamilySUPERFAMILY51445(Trans)glycosidasescoord: 109..342

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig993contigF-serratus_M_contig993:213780..236145 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig993.21220.1mRNA_F-serratus_M_contig993.21220.1Fucus serratus malemRNAF-serratus_M_contig993 213751..236288 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig993.21220.1 ID=prot_F-serratus_M_contig993.21220.1|Name=mRNA_F-serratus_M_contig993.21220.1|organism=Fucus serratus male|type=polypeptide|length=424bp
MMDQRMTRIGGFGERSGVGERSGEHLVRHLPFRIFGLLQASWTAGALRAT
GSQWKRAMRLIIVRSRPRRRRRKQDSAFQLPIAKQFNSMPPRLVLMLMVL
LMVSPTEAWWKPGPGVTWQWQLEGDLELDVDVDMYNIDLFDVNEAEIEEL
REREVVVICSFSAGTYEEERADTDDFDVSWLGNEVPDADGDLWLNITHDG
VMSIMEGRLNLAVNKSCDGVEPSNVQVYLEEDSGFNISANDQLVYNSWLA
DEAHARNLSVGLRNDWPQVEALEPSFDWALSEDCLYRGECDAYRTNFEVA
EKAVLDAEYFQFDLSFCENVTALGLSVIIKDLSLDSRRCSCQEPSTDIDC
DSLLMTSTSESSGGSSPWVIGTAVGASIAIILTVGLISAWRRRKVGANGG
GPGEGAADRFGYRQTAINGVARR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004352GH114_TIM-barrel
IPR017853Glycoside_hydrolase_SF