prot_F-serratus_M_contig990.21211.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig990.21211.1
Unique Nameprot_F-serratus_M_contig990.21211.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length113
Homology
BLAST of mRNA_F-serratus_M_contig990.21211.1 vs. uniprot
Match: A0A6H5K319_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K319_9PHAE)

HSP 1 Score: 114 bits (286), Expect = 2.490e-27
Identity = 56/110 (50.91%), Postives = 76/110 (69.09%), Query Frame = 0
Query:    3 IRRYQRELFDQPRVALSLKIRMVKAEAIEALLYGCSAWTIRQEHYTKLRIAHHRVLLRIMGAQRQRPDHGMTSYNCALEITRCQSIEITLRTRRLLWAGTLIRMSCGRLP 112
            I+RY  ELFD+P     LK R+++AEA+EALLYGC  W+ R+ HY  L+  HHR+LLR++G +R+R  +   SY  AL+   CQS+E T+R RRLL+AG + R   GRLP
Sbjct: 1171 IKRYATELFDRPGAPFRLKARLLQAEAVEALLYGCMTWSPRRNHYGMLQTTHHRLLLRVIGYRRKRGTYRQLSYAQALKRVGCQSVEATVRQRRLLFAGAVARQPDGRLP 1280          
BLAST of mRNA_F-serratus_M_contig990.21211.1 vs. uniprot
Match: A0A6H5JLM6_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLM6_9PHAE)

HSP 1 Score: 114 bits (286), Expect = 2.500e-27
Identity = 56/110 (50.91%), Postives = 76/110 (69.09%), Query Frame = 0
Query:    3 IRRYQRELFDQPRVALSLKIRMVKAEAIEALLYGCSAWTIRQEHYTKLRIAHHRVLLRIMGAQRQRPDHGMTSYNCALEITRCQSIEITLRTRRLLWAGTLIRMSCGRLP 112
            I+RY  ELFD+P     LK R+++AEA+EALLYGC  W+ R+ HY  L+  HHR+LLR++G +R+R  +   SY  AL+   CQS+E T+R RRLL+AG + R   GRLP
Sbjct: 1375 IKRYATELFDRPGAPFRLKARLLQAEAVEALLYGCMTWSPRRNHYGMLQTTHHRLLLRVIGYRRKRGTYRQLSYAQALKRVGCQSVEATVRQRRLLFAGAVARQPDGRLP 1484          
BLAST of mRNA_F-serratus_M_contig990.21211.1 vs. uniprot
Match: A0A6H5J984_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J984_9PHAE)

HSP 1 Score: 112 bits (280), Expect = 2.640e-27
Identity = 55/110 (50.00%), Postives = 73/110 (66.36%), Query Frame = 0
Query:    3 IRRYQRELFDQPRVALSLKIRMVKAEAIEALLYGCSAWTIRQEHYTKLRIAHHRVLLRIMGAQRQRPDHGMTSYNCALEITRCQSIEITLRTRRLLWAGTLIRMSCGRLP 112
            +RRY RELFD+P+    LKI +++ EA+EALLYGC  W+    HY  LR  HHR+LLR+ G +R++      S+   L+   CQS+E+TLR RRLL+AG L R   GRLP
Sbjct:  106 LRRYGRELFDRPKAPFRLKIHLLQTEAMEALLYGCMTWSPLSGHYQTLRSIHHRLLLRVTGYKRKKDTFRQLSFAQTLKRVECQSVEVTLRQRRLLFAGALARQPDGRLP 215          
BLAST of mRNA_F-serratus_M_contig990.21211.1 vs. uniprot
Match: UPI001AA1A1FE (hypothetical protein n=1 Tax=Vibrio parahaemolyticus TaxID=670 RepID=UPI001AA1A1FE)

HSP 1 Score: 107 bits (268), Expect = 3.440e-27
Identity = 53/90 (58.89%), Postives = 65/90 (72.22%), Query Frame = 0
Query:   24 MVKAEAIEALLYGCSAWTIRQEHYTKLRIAHHRVLLRIMGAQRQ-RPDHGMTSYNCALEITRCQSIEITLRTRRLLWAGTLIRMSCGRLP 112
            M+KAE IE LLYGC  WT+  +H+ KLR AHH VLLR++G QR+ R DH   SY  AL ITRC+SIE T+R RRL +AG ++R   GRLP
Sbjct:    1 MLKAEVIETLLYGCVTWTLNADHFAKLRSAHHEVLLRVIGFQRRLRTDHTTLSYAKALRITRCESIETTIRKRRLFFAGAVVRQHEGRLP 90          
BLAST of mRNA_F-serratus_M_contig990.21211.1 vs. uniprot
Match: A0A6H5LCI9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCI9_9PHAE)

HSP 1 Score: 109 bits (273), Expect = 4.390e-27
Identity = 55/110 (50.00%), Postives = 73/110 (66.36%), Query Frame = 0
Query:    3 IRRYQRELFDQPRVALSLKIRMVKAEAIEALLYGCSAWTIRQEHYTKLRIAHHRVLLRIMGAQRQRPDHGMTSYNCALEITRCQSIEITLRTRRLLWAGTLIRMSCGRLP 112
            +RRY  ELFD+P     LKIR+++AEA+EALLYGC  W+    HY  LR  HHR+LLR++G +R++  +   SY   L+  +CQS+E T+R RRLL AG L     GRLP
Sbjct:  142 LRRYGWELFDRPNAPFRLKIRLLQAEAMEALLYGCMTWSPLSGHYQTLRSIHHRLLLRVIGYKRKKDTYRQLSYAQTLKRVQCQSVEATIRQRRLLIAGALATQPDGRLP 251          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig990.21211.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K319_9PHAE2.490e-2750.91Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JLM6_9PHAE2.500e-2750.91Reverse transcriptase domain-containing protein n=... [more]
A0A6H5J984_9PHAE2.640e-2750.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI001AA1A1FE3.440e-2758.89hypothetical protein n=1 Tax=Vibrio parahaemolytic... [more]
A0A6H5LCI9_9PHAE4.390e-2750.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR47027FAMILY NOT NAMEDcoord: 12..110

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig990contigF-serratus_M_contig990:196355..196693 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig990.21211.1mRNA_F-serratus_M_contig990.21211.1Fucus serratus malemRNAF-serratus_M_contig990 194761..197144 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig990.21211.1 ID=prot_F-serratus_M_contig990.21211.1|Name=mRNA_F-serratus_M_contig990.21211.1|organism=Fucus serratus male|type=polypeptide|length=113bp
MRIRRYQRELFDQPRVALSLKIRMVKAEAIEALLYGCSAWTIRQEHYTKL
RIAHHRVLLRIMGAQRQRPDHGMTSYNCALEITRCQSIEITLRTRRLLWA
GTLIRMSCGRLP*
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