prot_F-serratus_M_contig990.21208.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig990.21208.1
Unique Nameprot_F-serratus_M_contig990.21208.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length350
Homology
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BLAST of mRNA_F-serratus_M_contig990.21208.1 vs. uniprot
Match: D8LQT1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQT1_ECTSI)

HSP 1 Score: 105 bits (262), Expect = 3.860e-22
Identity = 98/251 (39.04%), Postives = 117/251 (46.61%), Query Frame = 0 
Query:    1 MDPAKCLEILSNRGVCRGPHIDLDPREEHCAHGRRSPDDPAQEPPASVDETDQAAXXXXXXASVGGPGQGG-GQVINLATGSNETAAASQAASMLAESLRPCAVAAPLDSAGAGAEVSTLAAQREGTSSDEA------------VDARGMGGHG---------------GPGRVAGNE-GSSSSRAVSGAQHEVKADAANGFVERLGGMTPGALVASFRRAQEERVALYKRFDGGLKDALRSGDYSGYPAL 222
            MDPAKCLEIL NRG+C G H        H  H    P  P+Q                   A  GG   GG GQVINLATGSNET AA++AAS L  ++       P  SA AGA                              ++ G  GH                  G     + G +   A +G + E       G ++ L GM+ GALVASFRRAQEERVALY++F+GGLK+ALR GDYSGYPAL
Sbjct:    1 MDPAKCLEILGNRGMCSGLH-----GAHHHGHAA-GPTTPSQ----------------AEAAGTGGENAGGRGQVINLATGSNETRAATEAASGLMAAMAT----GPPSSAAAGAGCCXXXXXXXXXXXXXXXXXXXXXXXXXYANSDGGAGHSCNXXXXXXXXXXXXXXXGEAGARDLGLNLPTAAAGQEEE------GGGLQGLQGMSAGALVASFRRAQEERVALYRKFNGGLKEALRIGDYSGYPAL 219
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig990.21208.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LQT1_ECTSI3.860e-2239.04Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039491Required for excision 1-B domain-containing proteinPFAMPF14966DNA_repr_REX1Bcoord: 185..222
e-value: 3.6E-5
score: 24.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig990contigF-serratus_M_contig990:117174..124310 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig990.21208.1mRNA_F-serratus_M_contig990.21208.1Fucus serratus malemRNAF-serratus_M_contig990 116747..124758 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig990.21208.1 ID=prot_F-serratus_M_contig990.21208.1|Name=mRNA_F-serratus_M_contig990.21208.1|organism=Fucus serratus male|type=polypeptide|length=350bp
MDPAKCLEILSNRGVCRGPHIDLDPREEHCAHGRRSPDDPAQEPPASVDE
TDQAAAAAAAMASVGGPGQGGGQVINLATGSNETAAASQAASMLAESLRP
CAVAAPLDSAGAGAEVSTLAAQREGTSSDEAVDARGMGGHGGPGRVAGNE
GSSSSRAVSGAQHEVKADAANGFVERLGGMTPGALVASFRRAQEERVALY
KRFDGGLKDALRSGDYSGYPALWPPGSERRDEALGGHHPQGTGTREGAAH
RDCGLSLGVHARGEGARHGPGKDRACGKRGCASNIPCTGTPPQGKREGFE
VQGGRRGGFGNGAVGGVALRGGGVVVTGWRRLTHPPCTGTRPQGGHWGV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039491REX1-B