prot_F-serratus_M_contig990.21207.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig990.21207.1
Unique Nameprot_F-serratus_M_contig990.21207.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length100
Homology
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BLAST of mRNA_F-serratus_M_contig990.21207.1 vs. uniprot
Match: A0A5D6XEV9_9STRA (Robl_LC7 domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XEV9_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 2.900e-16
Identity = 41/80 (51.25%), Postives = 56/80 (70.00%), Query Frame = 0 
Query:    1 MNNDGIVIKYESMEYRTAVHHAALILDLASKSKKFMRELF-EPPDNEVESLRLRTREHEMIIALHDNFTLAVIQQDPSAK 79
            M+NDGIV+KYE++EY+ AV HA  +L L  ++KK + +LF E  + E+E LRLRT+ HEMII  H  FTL  +QQ   A+
Sbjct:   28 MSNDGIVVKYENLEYKEAVMHAYHVLTLYGRTKKHLHKLFPESGEGEIEWLRLRTKLHEMIITQHLRFTLVALQQPELAE 107
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BLAST of mRNA_F-serratus_M_contig990.21207.1 vs. uniprot
Match: A0A6U1KG54_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A6U1KG54_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 2.650e-14
Identity = 35/77 (45.45%), Postives = 56/77 (72.73%), Query Frame = 0 
Query:    2 NNDGIVIKYESMEY--RTAVHHAALILDLASKSKKFMRELFEPPDNEVESLRLRTREHEMIIALHDNFTLAVIQQDP 76
            NNDG+V+++E++    +  +HHA   LDL +K++  +R LFE P+NE+ES+RL+T  +EMII+   N+TL V+Q+ P
Sbjct:   28 NNDGVVLRHENLGAADKLGIHHAYHALDLMNKARDHIRTLFEAPENELESVRLKTDNYEMIISQVGNYTLCVMQKPP 104
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BLAST of mRNA_F-serratus_M_contig990.21207.1 vs. uniprot
Match: F0W7H7_9STRA (Uncharacterized protein AlNc14C30G2783 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W7H7_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 8.670e-11
Identity = 34/76 (44.74%), Postives = 54/76 (71.05%), Query Frame = 0 
Query:    1 MNNDGIVIKYESMEYRTAVHHAALILDLASKSKKFMRELFEPP---DNEVESLRLRTREHEMIIALHDNFTLAVIQ 73
            M+NDGIV++YE++EYR AV +A  +L L S++++ + ++       + E+E LRL+T+ HEMIIA H  +TL V+Q
Sbjct:   28 MSNDGIVVRYENLEYREAVMYAYHVLALYSRTRRQVAKIMGSALQENEELEWLRLKTKLHEMIIAQHLRYTLVVLQ 103
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BLAST of mRNA_F-serratus_M_contig990.21207.1 vs. uniprot
Match: A0A024G6W6_9STRA (Robl_LC7 domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G6W6_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 1.220e-10
Identity = 34/76 (44.74%), Postives = 53/76 (69.74%), Query Frame = 0 
Query:    1 MNNDGIVIKYESMEYRTAVHHAALILDLASKSKKFMRELFEPP---DNEVESLRLRTREHEMIIALHDNFTLAVIQ 73
            M+NDGIV++YE++EYR AV +A  +L L ++++K + ++         E+E LRL+T+ HEMIIA H  +TL V+Q
Sbjct:   28 MSNDGIVVRYENLEYREAVMYAYHVLALYARARKQVAKIMGSTLQESEEMEWLRLKTKLHEMIIAQHLRYTLVVLQ 103
[Close]
BLAST of mRNA_F-serratus_M_contig990.21207.1 vs. uniprot
Match: A0A2R5GKG6_9STRA (Dynein light chain roadblock-type 1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GKG6_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 1.020e-9
Identity = 32/80 (40.00%), Postives = 47/80 (58.75%), Query Frame = 0 
Query:    2 NNDGIVIKYESME-------YRTAVHHAALILDLASKSKKFMRELFEPPDNEVESLRLRTREHEMIIALHDNFTLAVIQQ 74
            N DGIV++YE          YR  V  A  + +L +   +  +++  PP+NEVE LRL+TR +EMI+A   NFT+  IQ+
Sbjct:   26 NKDGIVLRYEGWPSEEGDGGYRKCVQLAGTVANLVNHCSQGCQDMLAPPNNEVECLRLKTRNYEMIVAPGANFTMVAIQE 105
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig990.21207.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5D6XEV9_9STRA2.900e-1651.25Robl_LC7 domain-containing protein n=1 Tax=Pythium... [more]
A0A6U1KG54_9STRA2.650e-1445.45Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
F0W7H7_9STRA8.670e-1144.74Uncharacterized protein AlNc14C30G2783 n=1 Tax=Alb... [more]
A0A024G6W6_9STRA1.220e-1044.74Robl_LC7 domain-containing protein n=1 Tax=Albugo ... [more]
A0A2R5GKG6_9STRA1.020e-940.00Dynein light chain roadblock-type 1 n=1 Tax=Hondae... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 80..99
NoneNo IPR availableGENE3D3.30.450.30coord: 1..77
e-value: 8.9E-18
score: 66.1
NoneNo IPR availablePANTHERPTHR10779:SF18coord: 1..95
NoneNo IPR availablePANTHERPTHR10779DYNEIN LIGHT CHAIN ROADBLOCKcoord: 1..95
NoneNo IPR availableSUPERFAMILY103196Roadblock/LC7 domaincoord: 1..74
IPR004942Roadblock/LAMTOR2 domainPFAMPF03259Robl_LC7coord: 1..73
e-value: 3.3E-10
score: 39.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig990contigF-serratus_M_contig990:114009..115264 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig990.21207.1mRNA_F-serratus_M_contig990.21207.1Fucus serratus malemRNAF-serratus_M_contig990 113174..115339 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig990.21207.1 ID=prot_F-serratus_M_contig990.21207.1|Name=mRNA_F-serratus_M_contig990.21207.1|organism=Fucus serratus male|type=polypeptide|length=100bp
MNNDGIVIKYESMEYRTAVHHAALILDLASKSKKFMRELFEPPDNEVESL
RLRTREHEMIIALHDNFTLAVIQQDPSAKKKAAKEGADDVEEEEEEKKE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004942Roadblock/LAMTOR2_dom