prot_F-serratus_M_contig990.21205.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig990.21205.1
Unique Nameprot_F-serratus_M_contig990.21205.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length239
Homology
BLAST of mRNA_F-serratus_M_contig990.21205.1 vs. uniprot
Match: UPI001262CFA8 (heme-binding-like protein At3g10130, chloroplastic n=1 Tax=Pistacia vera TaxID=55513 RepID=UPI001262CFA8)

HSP 1 Score: 118 bits (296), Expect = 1.790e-29
Identity = 94/227 (41.41%), Postives = 127/227 (55.95%), Query Frame = 0
Query:    1 MGSVFGKDVSPELSPEYDVLGQGSNYEIRAYKPYLVAEV--ETGADPSSEDDRFRTLAKYIGVLGSPANEGKEGEDQGEKIQMTAPVVIGGPPPGGERXXXXXXXXXXXXPGEGAGEGPSKM--MQFIMPRKFKSISELPTPTDERVKLREVPEKLYIVRQFSGNMGTGGGHDASAELERANTEKGVEADGGALAEYVGEDAKYLVAKYNPPWTLPFLKTNELWFPL 223
            MG VFGK +S E +P+++V+   ++YEIR Y P +VA+V  E      ++D  F  LA YIG LG+P N       + EKI MTAPV+            XXXXXXXXXX    AG   +KM  MQFI+P K+    E P P DERV +RE  E+ Y V +F G + T    D   E +    +K +E DG  +        ++L+A+YNPPWTLP  +TNE+  P+
Sbjct:    1 MGMVFGK-ISVE-TPKFEVIQSTADYEIRKYAPSVVAQVTYEPSQFKGNKDGGFSVLANYIGALGNPQNT------KPEKIAMTAPVIX-----------XXXXXXXXXXXXXTAGGDETKMVTMQFILPDKYTKAEEAPQPVDERVVIREEGERKYAVVRFGG-VAT----DEVVEEKVDKLKKSLERDGFKIT------GEFLLARYNPPWTLPSFRTNEVMIPV 197          
BLAST of mRNA_F-serratus_M_contig990.21205.1 vs. uniprot
Match: A0A166AQM7_DAUCS (Uncharacterized protein n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=A0A166AQM7_DAUCS)

HSP 1 Score: 118 bits (296), Expect = 1.990e-29
Identity = 93/230 (40.43%), Postives = 124/230 (53.91%), Query Frame = 0
Query:    1 MGSVFGKDVSPELSPEYDVLGQGSNYEIRAYKPYLVAEVETGADP--SSEDDRFRTLAKYIGVLGSPANEGKEGEDQGEKIQMTAPVVIGGPPPGGERXXXXXXXXXXXXPGEGAGEGPSKMMQFIMPRKFKSISELPTPTDERVKLREVPEKLYIVRQFSGNMGTGGGHDASAELERANTEKGVEADGGALAEYVGEDA-----KYLVAKYNPPWTLPFLKTNELWFPL 223
            MG +FGK +S E +P+Y V+   ++YEIR Y P +VA+V         ++D  F  LA YIG LG+P N+      + E I MTAPV+          XXXXXXXXX    G+G  EG   +MQFI+P K+K   E P P DERV +RE  E+ Y V +FSG                  TE+ V    G L E++  D      ++L+ +YNPPWTLP  KTNE+  P+
Sbjct:    1 MGMIFGK-ISVE-TPKYQVVKATTDYEIREYPPCVVAQVTYNPTQFKGNKDGGFMLLANYIGALGNPQNK------KPETIAMTAPVIT----QKXXXXXXXXXXXXTNSGGDGGSEGVI-VMQFILPDKYKKAEEAPEPVDERVVVREQGERKYAVVKFSGTA----------------TEEVVAEKVGKLREWLERDGVKVVGEFLLGRYNPPWTLPRFKTNEVMIPV 201          
BLAST of mRNA_F-serratus_M_contig990.21205.1 vs. uniprot
Match: UPI001FB05A5E (heme-binding-like protein At3g10130, chloroplastic n=1 Tax=Impatiens glandulifera TaxID=253017 RepID=UPI001FB05A5E)

HSP 1 Score: 118 bits (295), Expect = 2.390e-29
Identity = 90/224 (40.18%), Postives = 122/224 (54.46%), Query Frame = 0
Query:    1 MGSVFGK-DVSPELSPEYDVLGQGSNYEIRAYKPYLVAEVETGADPSSEDDRFRTLAKYIGVLGSPANEGKEGEDQGEKIQMTAPVVIGGPPPGGERXXXXXXXXXXXXPGEGAGEGPSKMMQFIMPRKFKSISELPTPTDERVKLREVPEKLYIVRQFSGNMGTGGGHDASAELERANTEKGVEADGGALAEYVGEDAKYLVAKYNPPWTLPFLKTNELWFPL 223
            MG V GK DV    +P+YD++     YEIR Y P ++AEV T      +D  F  LA YIGVLG+P N       + EKI MTAPV+         +   XXXXXXXXX      E     M FI+P K++   + P P DERV ++E+ E+ Y V +FSG        D   + +    +KG+E DG  +   +GE   +L+A+YNPPWTLP  +TNE+  P+
Sbjct:    1 MGLVMGKIDVE---TPKYDIVKSTDEYEIRKYAPSVIAEV-TYDSTGDKDGGFTILANYIGVLGNPQNT------KPEKIAMTAPVIT--------QSAVXXXXXXXXXXXXXXEEEKKSTMGFILPAKYERAEDAPRPVDERVVIKELGERKYGVVKFSGVA-----RDGIVKEKVEKLKKGLERDGFKV---IGE---FLLARYNPPWTLPIFRTNEVMIPV 195          
BLAST of mRNA_F-serratus_M_contig990.21205.1 vs. uniprot
Match: A0A5B6YFW1_DAVIN (Uncharacterized protein n=4 Tax=Davidia involucrata TaxID=16924 RepID=A0A5B6YFW1_DAVIN)

HSP 1 Score: 118 bits (295), Expect = 2.730e-29
Identity = 95/232 (40.95%), Postives = 127/232 (54.74%), Query Frame = 0
Query:    1 MGSVFGKDVSPELSPEYDVLGQGSNYEIRAYKPYLVAEVETGADPSS----EDDRFRTLAKYIGVLGSPANEGKEGEDQGEKIQMTAPVVIGGPPPGGERXXXXXXXXXXXXPGEGAGEGPSKM--MQFIMPRKFKSISELPTPTDERVKLREVPEKLYIVRQFSGNMGTGGGHDASAELERANTEK---GVEADGGALAEYVGEDAKYLVAKYNPPWTLPFLKTNELWFPL 223
            MG VFGK +  E +P+++V+     YEIR Y P +VAEV    DPS     +D  F  L  YIG  G+P N       + EKI MTAPV+         +  XXXXXXXXXX   G GEG  K+  MQFI+P K+    E+P P DERV + E  E+ Y V +F G+        A+ E+     EK    +E DG  +   +GE   +++A+YNPPWTLP  +TNE+  P+
Sbjct:    1 MGMVFGK-ICVE-TPKFEVVQSTDEYEIRKYSPSVVAEVTY--DPSQFNGDKDGGFTVLVNYIGAFGNPQNT------KPEKIAMTAPVIT--------KSSXXXXXXXXXXXXTGGGEGEEKLVTMQFILPSKYTKAEEVPKPVDERVVIGEEGERKYGVVRFGGS--------ATEEVVEGKVEKLKNNLERDGYKV---IGE---FVLARYNPPWTLPAFRTNEIMIPI 200          
BLAST of mRNA_F-serratus_M_contig990.21205.1 vs. uniprot
Match: A0A6P6GM27_ZIZJJ (heme-binding-like protein At3g10130, chloroplastic n=2 Tax=Ziziphus jujuba TaxID=326968 RepID=A0A6P6GM27_ZIZJJ)

HSP 1 Score: 118 bits (295), Expect = 2.950e-29
Identity = 94/227 (41.41%), Postives = 131/227 (57.71%), Query Frame = 0
Query:    1 MGSVFGKDVSPELSPEYDVLGQGSNYEIRAYKPYLVAEVETGADPSS----EDDRFRTLAKYIGVLGSPANEGKEGEDQGEKIQMTAPVVIGGPPPGGERXXXXXXXXXXXXPGEGAGEGPSKMMQFIMPRKFKSISELPTPTDERVKLREVPEKLYIVRQFSGNMGTGGGHDASAELERANTEKGVEADGGALAEYVGEDAKYLVAKYNPPWTLPFLKTNELWFPL 223
            MG VFGK +S E +P+Y+V+   ++YEIR Y P ++A+V    DPS     +D  F  LA YIG LG+P N       + EKI MTAPV+   P    E XXXXXXXXXX   GE   E     MQF++P K++   E P P DERV++ E  E+ Y V +F G + T    +   E +    +K +E +G  +   +G+   +L+A+YNPPWTLP  +TNE+  P+
Sbjct:    1 MGMVFGK-ISVE-TPKYEVIRSFTDYEIRKYAPSVIAQVTY--DPSQFKGDKDGGFTLLANYIGALGNPQNV------KPEKIAMTAPVITKAPQSTAEXXXXXXXXXXXSRGGE---EKKMVTMQFLLPDKYRKAEEAPKPVDERVEIIEEGERKYGVVRFGG-VAT----EKVVEEKVEMLKKSLEREGYKI---IGD---FLLARYNPPWTLPMFRTNEVMIPI 203          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig990.21205.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001262CFA81.790e-2941.41heme-binding-like protein At3g10130, chloroplastic... [more]
A0A166AQM7_DAUCS1.990e-2940.43Uncharacterized protein n=1 Tax=Daucus carota subs... [more]
UPI001FB05A5E2.390e-2940.18heme-binding-like protein At3g10130, chloroplastic... [more]
A0A5B6YFW1_DAVIN2.730e-2940.95Uncharacterized protein n=4 Tax=Davidia involucrat... [more]
A0A6P6GM27_ZIZJJ2.950e-2941.41heme-binding-like protein At3g10130, chloroplastic... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006917SOUL haem-binding proteinPFAMPF04832SOULcoord: 14..222
e-value: 3.8E-39
score: 134.5
IPR006917SOUL haem-binding proteinPANTHERPTHR11220HEME-BINDING PROTEIN-RELATEDcoord: 1..222
IPR011256Regulatory factor, effector binding domain superfamilyGENE3D3.20.80.10coord: 10..94
e-value: 1.0E-8
score: 36.9
coord: 95..231
e-value: 3.9E-23
score: 84.0
IPR011256Regulatory factor, effector binding domain superfamilySUPERFAMILY55136Probable bacterial effector-binding domaincoord: 14..223
NoneNo IPR availablePANTHERPTHR11220:SF58SOUL HEME-BINDING FAMILY PROTEINcoord: 1..222

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig990contigF-serratus_M_contig990:70303..82650 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig990.21205.1mRNA_F-serratus_M_contig990.21205.1Fucus serratus malemRNAF-serratus_M_contig990 70185..82775 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig990.21205.1 ID=prot_F-serratus_M_contig990.21205.1|Name=mRNA_F-serratus_M_contig990.21205.1|organism=Fucus serratus male|type=polypeptide|length=239bp
MGSVFGKDVSPELSPEYDVLGQGSNYEIRAYKPYLVAEVETGADPSSEDD
RFRTLAKYIGVLGSPANEGKEGEDQGEKIQMTAPVVIGGPPPGGEREKIS
MTAPVVQGPGEGAGEGPSKMMQFIMPRKFKSISELPTPTDERVKLREVPE
KLYIVRQFSGNMGTGGGHDASAELERANTEKGVEADGGALAEYVGEDAKY
LVAKYNPPWTLPFLKTNELWFPLPLSREEVAAKLPEKQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006917SOUL_haem-bd
IPR011256Reg_factor_effector_dom_sf