prot_F-serratus_M_contig99.21187.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig99.21187.1
Unique Nameprot_F-serratus_M_contig99.21187.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length247
Homology
BLAST of mRNA_F-serratus_M_contig99.21187.1 vs. uniprot
Match: A0A7S2W819_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W819_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 1.420e-19
Identity = 81/253 (32.02%), Postives = 128/253 (50.59%), Query Frame = 0
Query:    2 WKCLHDDPATSKLLKQIYGGVRPEISYPKVNTAPRTDPPPAFMPGDRGKQRANRVTRTGTRFS-------KEVKAPKFRATKSEAERPAPIDSAVMRRKQEAKIKEEQATNRLKIEHYRPPYVKPVGEDEKLRLAEKFEYGGGKALPDEMTRPAVPI---PSEEKWKKSEAKRISGVLRRRKKDKGFECEDILDKPTDGCAHATNMFDQVASEIEERQKFLLDARESGLRYENEGLIMAEISHKMAELAHLTP 244
            WK         +LL+QIYG   P ++ P    +    PP         +  +NRV +   R S       K V+ P+    ++ A+R       V RRK+   I++E    ++++EHYRPP+++P+G+ EK RLAE   + GGK LP EMT  A+P+   PSE+  +  E +RI    RRR    G   E  L +P+   +H   + + +  EI+ER+K L D +  G+R E+   +  EI+ ++ EL  + P
Sbjct:   23 WKAFDTSSEAGRLLRQIYGSKPPPVNVPLPRRSRNPGPPTEGW-----RPVSNRVGQVDPRRSTRSIDKEKAVQIPR----RARADRSYSKIDLVSRRKRGDVIRDELQDAKMRMEHYRPPHLRPMGQ-EKDRLAEICAFKGGKILPAEMT--AIPLEVTPSEQVARIKERERIEKARRRRA---GLP-EPTLTRPSAPKSHTQMLEETILDEIDERRKHLEDMQGLGMRAEDAKTLAGEIAVRVRELRKVNP 259          
BLAST of mRNA_F-serratus_M_contig99.21187.1 vs. uniprot
Match: A0A7S4MSU8_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MSU8_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 2.030e-18
Identity = 82/263 (31.18%), Postives = 117/263 (44.49%), Query Frame = 0
Query:    2 WKCLHDDPATSKLLKQIYG---GVRPEISYPKVNTAPRTDPPPAFMP----GDRGKQRANRVTRTGTRFSKEVKAPKFRATKSEAERPAPIDSAVMRRKQEAKIKEEQATNRLKIEHYRPPYVKPVGED-EKLRLAEKFEYGGGKALPDEMTRPAVPIPSEEKWKKSEAKRISGVLRRRKKDKGFECEDILDKPTDGCA--------------HATNMFDQVASEIEERQKFLLDARESGLRYENEGLIMAEISHKMAELAHL 242
            W+    D    +LL ++YG   G +P+I+YPK+ T        A       G+  ++RA        R +  V  PK  +     E  + + + + RRK E    E+ A        +RPP       D EK RL E F YGGG ALP+E+T P  P+PSEEK ++ EA+R+     RR+  +    ++  D  +D  +              H   MFDQV  EIEER+ F     E+         I  EIS +M EL  L
Sbjct:   21 WRVFQHDTEAGRLLSRLYGVQPGGKPQINYPKLKTRKSCSTERAHWKSPGQGEVDRKRAG----FDRRRAASVSVPKVGSAVRRGETASAV-TFIPRRKNEVACHEDLACIESVRHTFRPPNRSEYSTDREKDRLNELFTYGGGVALPEELTLPEAPLPSEEKHRRVEARRVEKAKCRRQARRNRGSKEDEDDLSDDSSLSNSRESEAMSDKGHNDRMFDQVLGEIEERRMFQFSMEEASSGALTRAQIADEISSRMKELVKL 278          
BLAST of mRNA_F-serratus_M_contig99.21187.1 vs. uniprot
Match: A0A7S4A5Q9_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A5Q9_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 1.660e-16
Identity = 80/245 (32.65%), Postives = 115/245 (46.94%), Query Frame = 0
Query:    2 WKCLHDDPATSKLLKQIYGGV--RPEISYPKVNTAPRTDPPPAFMPGDRGKQRANRVTRTGTRFS--KEVKAPKFRATKSEAERPA--PIDSAVMRRKQEAKIKEEQATNRLKIEHYRPPYVKPVGED-EKLRLAEKFEYGGGKALPDEMTRPAVPIPSEEKWKKSEAKRISGVLRRRKKDKGFECEDILDKPTDGCAHATNMFDQVASEIEERQKFLLDARESGLRYENEGLIMAEISHKMAEL 239
            W+         ++LK++YG     P I+YPK+ T PR   P  F+PG        ++  T  R +  +  KA      + +  RP   PID  V R++  A I E      ++   YRPP V     D EK RL E  ++GGGKALPDEMT     +PSE + +  E  R+    R+R+   G   E     P       T   +Q++ EIE+R  FL +A+  GL+ E    +  EIS +  EL
Sbjct:    7 WQAFDTSTEAGRMLKKLYGSSAGHPNIAYPKLTTKPRKQMP-KFIPG------GAKLDATDARSNSHRREKASTVEPWRKKYARPTYKPIDF-VARKRNTAAIDEILEDMSMRNAAYRPPRVNGSSTDAEKARLQEIAQFGGGKALPDEMTLGKTTLPSERRAQALEEARVEREWRKRR---GLTEEPAAAAPEPKSLE-TQQIEQISREIEDRAAFLEEAKAMGLKGEPIKRVEFEISTRKHEL 239          
BLAST of mRNA_F-serratus_M_contig99.21187.1 vs. uniprot
Match: A0A7S2FLT0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FLT0_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 1.740e-8
Identity = 49/148 (33.11%), Postives = 74/148 (50.00%), Query Frame = 0
Query:    2 WKCLHDDPATSKLLKQIYGGVRPEISYPKVNTAPRTDPPPA-FMPGDRGKQRANRVTRTGTRFSKEVKAPK-FRATKSEAERPAPIDSAVMRRKQEAKIKEEQATNRLKIEHYRPPYVKPVGEDEKLRLAEKFEYGGGKALPDEMTRP 147
            WK         +LLK++YG   P ++ P    + +T  P   + PG  G+  A    +     + E K  + +R  ++E+   A ID    RR   A IK E     ++   YRP + +P+G+DEK R+AE   Y GG+ALP+EMT P
Sbjct:   37 WKAFDTSTEAGRLLKKLYGNKPPPVNVPLPRRSKKTAAPTGEWRPGG-GRVDAVDPRKASRSKAAEAKVARGYRKVRAESSY-AQIDFVDSRRSG-AVIKSELDDMDMRQRAYRPAHHRPIGDDEKKRMAEICTYKGGRALPEEMTNP 181          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig99.21187.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A7S2W819_9STRA1.420e-1932.02Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7S4MSU8_9STRA2.030e-1831.18Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S4A5Q9_9STRA1.660e-1632.65Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S2FLT0_9STRA1.740e-833.11Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007914Uncharacterised protein family UPF0193PFAMPF05250UPF0193coord: 77..242
e-value: 2.7E-10
score: 40.4
IPR007914Uncharacterised protein family UPF0193PANTHERPTHR28348FAMILY NOT NAMEDcoord: 67..242

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig99contigF-serratus_M_contig99:440398..447090 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig99.21187.1mRNA_F-serratus_M_contig99.21187.1Fucus serratus malemRNAF-serratus_M_contig99 439999..447351 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig99.21187.1 ID=prot_F-serratus_M_contig99.21187.1|Name=mRNA_F-serratus_M_contig99.21187.1|organism=Fucus serratus male|type=polypeptide|length=247bp
MWKCLHDDPATSKLLKQIYGGVRPEISYPKVNTAPRTDPPPAFMPGDRGK
QRANRVTRTGTRFSKEVKAPKFRATKSEAERPAPIDSAVMRRKQEAKIKE
EQATNRLKIEHYRPPYVKPVGEDEKLRLAEKFEYGGGKALPDEMTRPAVP
IPSEEKWKKSEAKRISGVLRRRKKDKGFECEDILDKPTDGCAHATNMFDQ
VASEIEERQKFLLDARESGLRYENEGLIMAEISHKMAELAHLTPPA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007914UPF0193