prot_F-serratus_M_contig99.21178.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig99.21178.1
Unique Nameprot_F-serratus_M_contig99.21178.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length1043
Homology
BLAST of mRNA_F-serratus_M_contig99.21178.1 vs. uniprot
Match: A0A6H5KBM8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBM8_9PHAE)

HSP 1 Score: 140 bits (353), Expect = 1.960e-30
Identity = 256/533 (48.03%), Postives = 281/533 (52.72%), Query Frame = 0
Query:   73 GAGNRKQNHGAGAKARKGMGAAGMPVEMGG-VAQPKPSMGGVPSFDHGGDAPFRTTSAPPSEQAQYHYQQVAWRNQMQMQMGPGGQQQQGMPGSLPV----------GGAIPTGPGGGATGPGMLMKGGPAQQGQVHA----------------PQGSQQQQRAXXXXXXXXXXXXXXXXXXXXXXXXXTRNMMPQQGGSRGGSRGVHPGQGQMHMQ-LRGGPGGVQSPRRGGVG-GTPQQIPLMHQAG-QQGGPTS--GAMPHQQHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVPHGHPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMRMQYGPAYMPGMMYGQMGGMYGPPQPYIPQQSLGMTQAMPGQVQALASMPPPSAVGPRGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNRKVLLIIDPATGKPIELPDAGSGGG---GVGSISGVGRMGGPLPGRSPRTTSGAASDVAKEMREKAQAALKSDTPP 570
            G GNRKQNHGAG KARKG GA G   + GG VAQPKPS+GG   F+H  D PFRTTSAPP+EQAQ++YQQ+AWRNQ QMQM                          GG IP GP                                       P G+QQQ +                           R MMPQQ G R G RG    QGQMHMQ +RGGP    SPRR G+  G+ QQ+P+M   G QQG P S  G MP QQ          XXXXXXXXXXXXXXXXXXXXXXXXXXXXX QV    PXXXXXXXXXXXXXXXXXXXX                                 GMY  PQ +IPQQ +GM Q MPGQV  LA +PPP        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                + R  L I+DP+TGKPI+  + G  GG   G  +    G  G   PGRSPR  +   SD AKEMREKAQAALK +T P
Sbjct:   57 GTGNRKQNHGAGGKARKG-GAGG---DAGGSVAQPKPSVGGAQQFEHAMDTPFRTTSAPPAEQAQFNYQQIAWRNQTQMQMNXXXXXXXXXXXXXXXXXXXXXXGMQGGPIPGGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPPGAQQQMQQ--------------------------RGMMPQQAGGRMGPRGTMQ-QGQMHMQQMRGGPTAGGSPRRTGMAAGSSQQMPMMRPGGPQQGAPGSAGGGMPLQQX---------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQV---QPXXXXXXXXXXXXXXXXXXXXM--------------------------------GMY--PQGFIPQQGMGMPQGMPGQVPGLAGVPPPXXX----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVGVPPSPLGGPAAPPKRRAALEIVDPSTGKPIDFSEGGGRGGXXLGPPAXXXXGAAGAVAPGRSPRLGAAGVSDAAKEMREKAQAALKGETLP 508          
BLAST of mRNA_F-serratus_M_contig99.21178.1 vs. uniprot
Match: D7FZS3_ECTSI (MIF4G domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZS3_ECTSI)

HSP 1 Score: 71.6 bits (174), Expect = 7.120e-9
Identity = 50/106 (47.17%), Postives = 56/106 (52.83%), Query Frame = 0
Query:   73 GAGNRKQNHGAGAKARKGM--GAAGMPVEMGGVAQPKPSMGGVPSFDHGG------------------------DAPFRTTSAPPSEQAQYHYQQVAWRNQMQMQM 152
            GAGNRKQNH            G AG     G VAQPKPS+GG   F+H                          D PFRTTSAPP+EQAQ++YQQ+AWRNQ QMQM
Sbjct:   57 GAGNRKQNHXXXXXXXXXXXXGDAG-----GSVAQPKPSVGGAQQFEHANMQYHHRTEPCHGAFEIILRGAALIDTPFRTTSAPPAEQAQFNYQQIAWRNQTQMQM 157          
BLAST of mRNA_F-serratus_M_contig99.21178.1 vs. uniprot
Match: A0A6H5KBU9_9PHAE (MI domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBU9_9PHAE)

HSP 1 Score: 61.6 bits (148), Expect = 9.070e-6
Identity = 79/173 (45.66%), Postives = 100/173 (57.80%), Query Frame = 0
Query:  865 MTLPVQQHGSAPAKSKAIAVGAGPGIVPPAPTTDSWDNDPVVPPQSQPKPPSLRPGGGMAXXXXXXXXXXXXXXXXXXXXXXSAGVGAGSXXVVXXXXSVXXXPGGAAG------NVQRVDPNKRGAPPVPTEFVPLGSKDDAGRMIYTKQELLTYSGLTEKPEGLPDFIISA 1031
            M  P Q    A A++ A+A G  P      PTTDSW ++P VP  +     SLRPGG M        XXXXXXXXXXXXXXX  G GAG XX  XXXX  XXX            ++ + +P +  AP VP E++ +G K + GR IY+K +L+ YSGLT++P GLP F I+A
Sbjct:    1 MMFPAQAAAQA-ARNAAVASGDRP-----PPTTDSWHDEPPVPKPTA----SLRPGGVMGLRPGGPSXXXXXXXXXXXXXXXLGG-GAGXXXXXXXXXXXXXXXXXXXXXXXXXXSLPQCNPARPNAPEVPKEYLAIG-KVENGRRIYSKSDLMKYSGLTKRPAGLPQFPITA 161          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig99.21178.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KBM8_9PHAE1.960e-3048.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZS3_ECTSI7.120e-947.17MIF4G domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KBU9_9PHAE9.070e-645.66MI domain-containing protein n=1 Tax=Ectocarpus sp... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 669..790
NoneNo IPR availablePANTHERPTHR23148SERINE/ARGININE REGULATED NUCLEAR MATRIX PROTEINcoord: 296..818

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig99contigF-serratus_M_contig99:162513..187225 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig99.21178.1mRNA_F-serratus_M_contig99.21178.1Fucus serratus malemRNAF-serratus_M_contig99 162513..187225 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig99.21178.1 ID=prot_F-serratus_M_contig99.21178.1|Name=mRNA_F-serratus_M_contig99.21178.1|organism=Fucus serratus male|type=polypeptide|length=1043bp
AFPIATTWSVRLMSLRPTQPSRGHDAGSHNAVQAVPAPVVTAVAAPQGPH
VSSAVSGVQQASGSTGASGNIPGAGNRKQNHGAGAKARKGMGAAGMPVEM
GGVAQPKPSMGGVPSFDHGGDAPFRTTSAPPSEQAQYHYQQVAWRNQMQM
QMGPGGQQQQGMPGSLPVGGAIPTGPGGGATGPGMLMKGGPAQQGQVHAP
QGSQQQQRAQVAQAQQQPQQHQHPQQPQSQQHQQTRNMMPQQGGSRGGSR
GVHPGQGQMHMQLRGGPGGVQSPRRGGVGGTPQQIPLMHQAGQQGGPTSG
AMPHQQHGHQQHGHQQHGHQQHGHQQHGHQQHGHQQHGHQQHGHQQQVPH
GHPPPQQQPPQQQQQQHVPPSPQHQQQQQQMMFQQQQMRMQYGPAYMPGM
MYGQMGGMYGPPQPYIPQQSLGMTQAMPGQVQALASMPPPSAVGPRGSAA
AAAAAASAAGGAGAPAAGGGVIPGPGTSGGVPPSPLGGPTPPPPAQNRKV
LLIIDPATGKPIELPDAGSGGGGVGSISGVGRMGGPLPGRSPRTTSGAAS
DVAKEMREKAQAALKSDTPPSAIAAAVAAGAAVQAAAKKPSMAAKMSPSA
PVPARAQPPYKGVAAASAPIPAIVREVPWTKASSTGRSGPAKVDGDAPTV
EVSFGSYGDIAIAEVKESREETAAAAAQVKADAAAAEKEKAEAVKRAEEA
RKAAEEEKEARKQAALKEKEARARAEAAAKAKAAAEAEAKAKAKAAAEIE
AKAKAAAEAEAAKKAEADQAAKAAKEKADADAAMEKAAKEQAAVVAREED
NKKAAALSAKKATTNGSARQEDLEEGEIPSSSSSSVSSEKKPAAAISTPA
STSQTAAPLAPAKKMTLPVQQHGSAPAKSKAIAVGAGPGIVPPAPTTDSW
DNDPVVPPQSQPKPPSLRPGGGMALRPGGGGGLRPGGGVGLRPGGGSAGV
GAGSGGVVGLGASVGAAPGGAAGNVQRVDPNKRGAPPVPTEFVPLGSKDD
AGRMIYTKQELLTYSGLTEKPEGLPDFIISAVGGGGGGFSGGG
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