prot_F-serratus_M_contig989.21168.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig989.21168.1
Unique Nameprot_F-serratus_M_contig989.21168.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length1268
Homology
BLAST of mRNA_F-serratus_M_contig989.21168.1 vs. uniprot
Match: A0A6H5JUV2_9PHAE (Ion_trans domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUV2_9PHAE)

HSP 1 Score: 113 bits (283), Expect = 2.940e-22
Identity = 113/384 (29.43%), Postives = 179/384 (46.61%), Query Frame = 0
Query:  621 MRLALDVLVYSGVIIV---FVL---------------KVVVIRDAGVLTPWELLWLIYVVGAIGQQLREVEETGSIRTHFSNPWNNVETATLVAITTALVFRMWAFVCDGHGEHFCGEQSGEVNEVYLAQYFQAASAPFVLGKVLFLTQIHSSLGPLM---------------HSL-FRMFSDLARFGALMLVFILGFALAFYSLFGSPSALLPDGGEISNFETYFSSLLTLFSSMLGTFDF-AVFDGAPMAEAGVVLLVLFLCLMNVTLLNLLIAILTTTHSKVEGNADKEAVLSEALIITQYRRAMRSDSLPSPLNVPQELICHLFWW-----------------NKERAKELFARG-------MFWLITGPVAIAATAVLW 945
            MR+ LD++VY G+I+    FVL               + VV R      P      I++VG + Q+ RE+    +   +  + WN ++  +L+ +T  LV R    V D   +              L   F A +AP ++ + LF  QIH   GP++               HS+ FRM   L +FG +M V +LGF +AF+  F              +F+++  S L LF +MLG  DF  VF G         LLV+ L ++ V LLNLL+AIL+T+H++V  N D+E  +S A ++  Y+  + +D LP+P N+ Q ++  + W                   + R+KE +A G       +FW++ GPVA+   ++LW
Sbjct:    1 MRMVLDLVVYIGMIVALSTFVLFHSQAEKSYVEGSTDEQVVFRTLD--WPEATCAKIFIVGGVFQEGREMAR--NFGRYCEDQWNALDLLSLLFLTVGLVGR----VVDWKSQ--------------LGPAFYALAAPLLVSRALFFVQIHPLQGPIIQASGEFRQVAKRNVSHSVVFRMTRILLKFGFVMAVILLGFIMAFHVQF-------------RDFDSFGESFLDLFKAMLGDNDFFKVFSGDTYDFVATFLLVVGLFIVTVMLLNLLVAILSTSHAQVAENIDREFKVSIARMMDHYQLVVTNDMLPTPFNLLQLVVWPIAWCLHGCCGRNSGVSGNTQQTRNRSKEAYACGSKAIEPVVFWVVLGPVAVNGGSLLW 349          
BLAST of mRNA_F-serratus_M_contig989.21168.1 vs. uniprot
Match: A0A6H5K4M1_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4M1_9PHAE)

HSP 1 Score: 95.1 bits (235), Expect = 5.410e-16
Identity = 88/307 (28.66%), Postives = 142/307 (46.25%), Query Frame = 0
Query:  682 FSNPWNNVETATLVAITTALVFRMWAFVCDGHGEHFCGEQSGEVNEVYLAQYFQAASAPFVLGKVLFLTQIHSSLGPLMHSLFRMFSDLARFGALMLVFILGFALAFYSLFGS------PSALLPDGGEI---SNFETYFSSLLTLFSSMLGTFDFAVFDGAPMAEAGVVLLVLFLCLMNVTLLNLLIAILTTTHSKVEGNADKEAVLSEALIITQYRRAMRSDSLPSPLNVPQELICHLF------------WWNKERAKELFARGM-----------------FWLITGPVAIAATAVLWAVSLP 950
            F + W  ++T T+  I  A +FR+         + F          ++ A++F A SAP +  ++L L+QI ++LGP+   ++RM S   RF A + + +L FALAF+++F +      P     D         F T+  S +T+F+           +GA    AG+ LLV+++  M V LL LLIA+L+TTH KV  NA+KE   + A  I Q  R +     P PLN+ + L+C +             W+ + R++    +                   F    G  A+  +A+LW VS+P
Sbjct:  452 FYDTWKFLDTPTIGCILVAFIFRVTTL-----DDKFF---------LFHARFFYALSAPRLFSRLLVLSQIDATLGPMTQVIWRMMSHTLRFSAFIAMVMLSFALAFHAVFHTCGEHIEPQCTFDDDDAFPIRDAFGTFGDSFVTVFTDCRCNLP----EGAR--NAGIFLLVVYMVTMTVVLLKLLIAVLSTTHGKVYDNAEKEFHHARACFIYQSARVVSRSRPPPPLNLIK-LVCGILLDAGTMLWRAGAWFRRGRSQAKMLKPFSTSHQRKTLEGGLQRLEFAFTFGVAAVGLSAILWIVSVP 737          
BLAST of mRNA_F-serratus_M_contig989.21168.1 vs. uniprot
Match: D7FNX2_ECTSI (Ion_trans domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNX2_ECTSI)

HSP 1 Score: 89.0 bits (219), Expect = 2.710e-14
Identity = 76/230 (33.04%), Postives = 115/230 (50.00%), Query Frame = 0
Query:  763 LFRMFSDLARFGALMLVFILGFALAFYSLFGSPSALLPDGGEISNFETYFSSLLTLFSSMLGTFDFAVF---------DGAP--MAEAGVVLLVLFLCLMNVTLLNLLIAILTTTHSKVEGNADKEAVLSEALIITQYRRAMRSDSLPSPLNVPQ-------ELICHLFWWNKERAKELFARG-----------------------MFWLIT-GPVAIAATAVLWAVSLP 950
            ++RM S   RFG  ++V + GFALAF ++FGS +A    G    +F T F   L++F + LG F F  F         + AP   ++AG  LLV +L ++ V +LNLL+A+LTT H +V  N +KE  L+   +I Q  RA+    +P PLN+ Q       + +  L WW +  A     R                        +F+++T G VA+A  ++LW +SLP
Sbjct:    5 IWRMMSQTLRFGVFIVVVMAGFALAFTTVFGSCNADSLLGESFGSFGTAF---LSVFEAPLGEFSFEDFHDVGTQCPDNPAPGRASDAGTFLLVAYLVVLAVVMLNLLVAVLTTAHGEVNANGEKEFHLARTRLILQSARAVAHRRIPPPLNLVQLIVGLLLDTVGELAWWVRLDAGRCKLRQEGEGFVPITATYGWHTFDGTLQRLFFVLTMGLVAVALNSLLWVLSLP 231          
BLAST of mRNA_F-serratus_M_contig989.21168.1 vs. uniprot
Match: A0A6H5JCX0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCX0_9PHAE)

HSP 1 Score: 85.5 bits (210), Expect = 3.700e-13
Identity = 92/326 (28.22%), Postives = 143/326 (43.87%), Query Frame = 0
Query:  358 VRECFLGAIAASDWPTNPLIPGLNLSVALIEAIRQSPDFRQPLLE-LRADVDALVLSVLEHLPDTVAGFNRFTPTGITPADLPSKGPLRMKKSLTGLGGVEASLSSTVARGQTNKGLGAIETAPVMGSGISFVQEMLEPELAGLRAKNCAGPLAQAVHFRHQEFICSPLVVDYLRLKFSAGLPNPFRETDWRRENGRTDRDLARFMLDEDESKLMVYVLQGG--------------------------CADSPRRVKGG--DKEKYWTFSPGMQFILAGLVSKTAAFFGVPAMRLALDVLVYSGVIIVFVLKVVVIRDAGVLTPWE 654
            + +C L  +AASD   N  I G+ LSVA ++  +++P+  +  LE ++  V AL+L +LE LP TV GFN                           GG+ A  S+ +     +K           G    F     +P LA L   N           + + F  +PL++DYL  KF+ GLP+   + D    NG T+ D+    L      +M  V+ GG                            +SPR +  G  D+    TF PG QF +AG ++K   ++ +PA+R+ LDV+VY  ++++  L ++V RD+G LT  E
Sbjct:   48 LHDCCLRVVAASD---NLFISGMTLSVARVDVTKKAPEGERGTLEAIQGHVHALLLEILERLPQTVNGFN---------------------------GGM-ADCSAVLGPEFDSK----------TGESTGF-----KPPLALLLLANS---------IQTETFCSTPLIMDYLSRKFTHGLPD-VGDKDGVLRNG-TEHDV----LSGSGPGMMSLVIGGGDDEELDERGYHEFRHKDLLVKNGLKASFESPRALLQGANDRLASLTFLPGAQFAIAGFLAKPNNYYRIPAVRMVLDVVVY--LLVIIALSILVFRDSGSLTRGE 310          
BLAST of mRNA_F-serratus_M_contig989.21168.1 vs. uniprot
Match: A0A6H5L4C8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4C8_9PHAE)

HSP 1 Score: 84.7 bits (208), Expect = 1.140e-12
Identity = 125/505 (24.75%), Postives = 208/505 (41.19%), Query Frame = 0
Query:  494 EPELAGLRAKNCAGPLAQAVHFRHQEFICSPLVVDYLRLKFSAGLP--------NPFR-ETDWRRENGRTDRDLAR-----------------------FMLDEDESKLMVYVLQGGCADSPRRVKGGDKEKY--W--TFSPGMQFILAGLVSKTAAFFGVPAMRLALDVLVYSGVIIVFVLKVVVIRDAGVLTPWELLWLIYVVGAIGQQLREVEETGSIRTHFSNPWNNVETATLVAITTALVFRMWAFVCDGHGEHFCGEQSGEVNEVYLAQYFQAASAPFVLGKVLF-LTQIHSSLGPLMHSLFRMFSDLARFGALMLVFILGFALAFYSLFGSPSALLP----DGGEISNFETYFSSLLTLFSSMLGTFDFAVFD-GAPMAEAGVVLLVLFLCLMNVTLLNLLIAILTTTHSKVEGNADKEAVLSEALIITQYRRAMRSDSLPSPLNVPQELI--------CHLFWWNKERAKE----LFARGMFWLITGPVAIAATAVL 944
            E E  G+R     GPLA A+     E +CSPLV+D L  K +AG+         NP +   + R   GR    LAR                                      +    D  R   G  K     W  T +P +Q +L G+ S+   F+ VPA RLALD +VY  ++ ++ + +  + + G + PWE+L  I+V+     +         + T       + +T      T A   R      D  G+   GE      + ++A +  A++AP +L ++L  +      LGP + ++  +  + ++    +   +LG ALA + ++G  S LL      GG +  F T+  S  T+  +  G  D  V D   P  E   VLL +F     + L+++ + +L+          +K   L+ A +I +   A R + LP P N+ Q  +        CH     + +A      +  R +FWL+ GP+A+A+  +L
Sbjct: 1025 ESEAVGMRGAAFEGPLALALQMGWTELVCSPLVLDLLWAKLTAGVELDVHSCGANPAQVPVEKRAREGRRGM-LARSAPAPAVTAATPVHNTAAXXXXXXXXXXXXXXXXATATRVERMDPARSSPGNSKHAAASWDITIAPSLQAVLVGVASRPDVFYRVPAARLALDAVVYLLMLAIYTVALYRV-EPGSIGPWEVLLYIWVLSMCFSE---------VTTGAGGVVGDADTERREGGTPAEPLRQRRR--DYRGDAVDGEWM--CFQGFVALF--ASAAPLLLFRLLRGVAAFLPVLGPAVKAISLLAREASKVLPSLACLLLGTALALHVMYGDGSPLLEGTELSGGFVDGFRTFGVSCRTVARAGFG--DIQVPDEDVPYGEPLYVLLYVFAAAGALALVSIYVGVLSNVKEASPVEMEKNFQLARARLIVRAAEASRRNVLPPPFNLAQGGLALVVSATQCHRHVSERRQAVSGACSVHGRFVFWLVLGPLAVASAMLL 1510          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig989.21168.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JUV2_9PHAE2.940e-2229.43Ion_trans domain-containing protein n=2 Tax=Ectoca... [more]
A0A6H5K4M1_9PHAE5.410e-1628.66Ion_trans domain-containing protein n=1 Tax=Ectoca... [more]
D7FNX2_ECTSI2.710e-1433.04Ion_trans domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JCX0_9PHAE3.700e-1328.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L4C8_9PHAE1.140e-1224.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1160..1201
NoneNo IPR availableGENE3D1.10.287.70coord: 755..871
e-value: 7.5E-9
score: 37.4
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 623..644
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 617..622
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 992..1267
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 770..791
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..593
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 650..669
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 811..830
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 842..863
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 864..927
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 710..728
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 750..769
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 670..688
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 645..649
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 928..953
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 729..749
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 689..709
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 792..810
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 965..991
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 594..616
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 954..964
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 831..841
NoneNo IPR availableTMHMMTMhelixcoord: 686..708
NoneNo IPR availableTMHMMTMhelixcoord: 649..666
NoneNo IPR availableTMHMMTMhelixcoord: 929..951
NoneNo IPR availableTMHMMTMhelixcoord: 627..644
NoneNo IPR availableTMHMMTMhelixcoord: 812..834
NoneNo IPR availableTMHMMTMhelixcoord: 964..986
NoneNo IPR availableTMHMMTMhelixcoord: 598..620
NoneNo IPR availableTMHMMTMhelixcoord: 841..863
NoneNo IPR availableTMHMMTMhelixcoord: 770..792
NoneNo IPR availableTMHMMTMhelixcoord: 728..750
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 158..337
e-value: 5.2E-9
score: 37.9
coord: 14..157
e-value: 2.5E-9
score: 38.9
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 20..276
IPR005821Ion transport domainPFAMPF00520Ion_transcoord: 679..871
e-value: 8.3E-16
score: 57.9
IPR002153Transient receptor potential channel, canonicalPANTHERPTHR10117TRANSIENT RECEPTOR POTENTIAL CHANNELcoord: 75..916

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig989contigF-serratus_M_contig989:130964..187267 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig989.21168.1mRNA_F-serratus_M_contig989.21168.1Fucus serratus malemRNAF-serratus_M_contig989 130375..187357 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig989.21168.1 ID=prot_F-serratus_M_contig989.21168.1|Name=mRNA_F-serratus_M_contig989.21168.1|organism=Fucus serratus male|type=polypeptide|length=1268bp
MPLSERKLVFTTEIETDSEDDNRSAISVAIKRGELSLLEAVLKWIPMGQV
RALFPRSKDNKGRTPLMLAAATGHTALFSAVATRLPPAEMLELLNAQCAM
GNSIFTYGVQSGRAEMIEAVVARFSANQVIPVLCVKNFVGETPLVHAVRA
PGPEAFRVIARILPSDQVIMQLEAKTDEGHTALTIATRTGVFPIWKEVER
RLPTLEVNRQLSMTDVYGENAIMLSIRSGSEVMFITVVQRLKNEQLLAQL
GARNVEGQTPAQVAVICDAKTILATMLRPAWVAACMLDNTDNSEAHLTVL
DLAAKPPAKFDILRCLLASGATATGRMVLRLTRNCCDDGSQEDDTLGGRN
GLAGFASVRECFLGAIAASDWPTNPLIPGLNLSVALIEAIRQSPDFRQPL
LELRADVDALVLSVLEHLPDTVAGFNRFTPTGITPADLPSKGPLRMKKSL
TGLGGVEASLSSTVARGQTNKGLGAIETAPVMGSGISFVQEMLEPELAGL
RAKNCAGPLAQAVHFRHQEFICSPLVVDYLRLKFSAGLPNPFRETDWRRE
NGRTDRDLARFMLDEDESKLMVYVLQGGCADSPRRVKGGDKEKYWTFSPG
MQFILAGLVSKTAAFFGVPAMRLALDVLVYSGVIIVFVLKVVVIRDAGVL
TPWELLWLIYVVGAIGQQLREVEETGSIRTHFSNPWNNVETATLVAITTA
LVFRMWAFVCDGHGEHFCGEQSGEVNEVYLAQYFQAASAPFVLGKVLFLT
QIHSSLGPLMHSLFRMFSDLARFGALMLVFILGFALAFYSLFGSPSALLP
DGGEISNFETYFSSLLTLFSSMLGTFDFAVFDGAPMAEAGVVLLVLFLCL
MNVTLLNLLIAILTTTHSKVEGNADKEAVLSEALIITQYRRAMRSDSLPS
PLNVPQELICHLFWWNKERAKELFARGMFWLITGPVAIAATAVLWAVSLP
LTLAWAARVLRTSGYLMIIPSILGISFNLGVAPFLTASLWLCGVTGIWYM
GDGVMEMSDLNEIEASRAHRRRNYAAGIPNSPVAKIAYLAMAAKGKTSSS
VVAAMEADATANTIQLHTPDDAQGRKGDNDSKGASRLWKEAAMLRGVGPA
GGSDAEGSAGARQHGFNVAMALRASHGLTVQKLREALDDRFKVTDQVDIQ
RREKDWSESLASVTAGQERLEEKIQETEKSRARIEAKLDQLITALQEKEG
SGCAERGSEIEKSPATSSSSSMPSSSEAPEGKEGARGAKDSRGRSGSRPQ
DSVAAAVESPKERRAPL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf
IPR005821Ion_trans_dom
IPR002153TRPC_channel