prot_F-serratus_M_contig989.21163.1 (polypeptide) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig989.21163.1 vs. uniprot
Match: A0A7S2R5B9_9STRA (DNA-directed RNA polymerases I, II, and III subunit RPABC3 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R5B9_9STRA) HSP 1 Score: 152 bits (385), Expect = 6.450e-45 Identity = 67/140 (47.86%), Postives = 102/140 (72.86%), Query Frame = 0 Query: 3 GVLFEDIFEVGKLNPDGKKFDKVNRLECKGLTYDVDILLDINCDIYPVKQGDRLTFVLASTLDLSGKPDDGTYKPMGDEITLADKYEYVMHGRVFRCEHLKDTKVQLFASFGGLLMRLTGDQRHVANIEVDSRVFCLLRQ 142 G+LF + FEV +NP+GK FD++NRL K TY++++L+D+NC+++ V + D+++F LAS+L + G DDGTY D +L D+YEY MHGRV+ H KD +++ SFGGLL+RLTGD RH+ +IE+D ++CL+ + Sbjct: 4 GILFTETFEVVTVNPEGKVFDRINRLMAKAETYNMELLVDVNCELWQVNEHDKISFALASSLAIDGTADDGTYN-QDDGPSLLDQYEYAMHGRVYGFNHKKDDVIEIDVSFGGLLLRLTGDARHLTSIELDQNIYCLMNK 142
BLAST of mRNA_F-serratus_M_contig989.21163.1 vs. uniprot
Match: Q568H8_DANRE (DNA-directed RNA polymerases I, II, and III subunit RPABC3 n=128 Tax=Gnathostomata TaxID=7776 RepID=Q568H8_DANRE) HSP 1 Score: 150 bits (379), Expect = 6.130e-44 Identity = 71/149 (47.65%), Postives = 105/149 (70.47%), Query Frame = 0 Query: 1 MSGVLFEDIFEVGKLNPDGKKFDKVNRLECKGLTYDVDILLDINCDIYPVKQGDRLTFVLASTLDLSGKPDDGTYKPMGDEITLADKYEYVMHGRVFRCEHLKD-----TKVQLFASFGGLLMRLTGDQRHVANIEVDSRVFCLLRQNA 144 M+G+LFEDIF+V ++PDGKKFD+V+RL C+ ++ +D++LD+N IYPV GD+ V+ASTL G PDDG Y P D + AD+++YVM+G+V+R E + T++ + S+GGLLMRL GD ++ EVDSRV+ L+++ A Sbjct: 1 MAGILFEDIFDVKDIDPDGKKFDRVSRLHCESESFKMDLILDVNIQIYPVDLGDKFRLVIASTLYEDGTPDDGEYNPQDDRPSRADQFDYVMYGKVYRIEGDETSTEAATRLSAYVSYGGLLMRLQGDANNLHGFEVDSRVYLLMKKLA 149
BLAST of mRNA_F-serratus_M_contig989.21163.1 vs. uniprot
Match: A0A1Q3C0J1_CEPFO (RNA_pol_Rpb8 domain-containing protein n=1 Tax=Cephalotus follicularis TaxID=3775 RepID=A0A1Q3C0J1_CEPFO) HSP 1 Score: 149 bits (375), Expect = 2.130e-43 Identity = 71/141 (50.35%), Postives = 101/141 (71.63%), Query Frame = 0 Query: 4 VLFEDIFEVGKLNPDGKKFDKVNRLECKGLTYDVDILLDINCDIYPVKQGDRLTFVLASTLDLSGKPDDGTYKPMGDEITLADKYEYVMHGRVFR--CEHLKDTKVQLFASFGGLLMRLTGDQRHVANIEVDSRVFCLLRQ 142 +LFEDIF V K++PDGKKFDKV+R+E K D+ + LD+N +IYP+ QG++ T LA TL+L G PD G Y G TLADKYEYVMHG++++ + K +K +++ S+GGLLM L GDQ +++ E+D R+F L+R+ Sbjct: 5 MLFEDIFNVDKVDPDGKKFDKVSRIEAKSQNCDMFMQLDVNSEIYPMSQGEKFTMALARTLNLDGTPDTGFYT-QGHRKTLADKYEYVMHGKLYKISADEGKGSKAEIYVSYGGLLMMLKGDQNYISKFELDQRLFLLIRK 144
BLAST of mRNA_F-serratus_M_contig989.21163.1 vs. uniprot
Match: A0A3B3ZM06_9GOBI (DNA-directed RNA polymerases I, II, and III subunit RPABC3 n=7 Tax=Euteleostomi TaxID=117571 RepID=A0A3B3ZM06_9GOBI) HSP 1 Score: 149 bits (376), Expect = 2.380e-43 Identity = 70/149 (46.98%), Postives = 105/149 (70.47%), Query Frame = 0 Query: 1 MSGVLFEDIFEVGKLNPDGKKFDKVNRLECKGLTYDVDILLDINCDIYPVKQGDRLTFVLASTLDLSGKPDDGTYKPMGDEITLADKYEYVMHGRVFRCEHLKD-----TKVQLFASFGGLLMRLTGDQRHVANIEVDSRVFCLLRQNA 144 M+G+LFEDIF+V ++PDGKKFD+V+RL C+ ++ +D++LD+N IYPV GD+ V+ASTL G PDDG Y P D + +D++EYVM+G+V++ E + T++ + S+GGLLMRL GD ++ EVDSRV+ L+++ A Sbjct: 11 MAGILFEDIFDVKDIDPDGKKFDRVSRLHCESESFKMDLILDVNIQIYPVDLGDKFRLVIASTLYEDGTPDDGEYNPQDDRPSRSDQFEYVMYGKVYKIEGDETSTEAATRLSAYVSYGGLLMRLQGDANNLHGFEVDSRVYLLMKKLA 159
BLAST of mRNA_F-serratus_M_contig989.21163.1 vs. uniprot
Match: A0A0E0KLI4_ORYPU (Uncharacterized protein n=2 Tax=Oryza TaxID=4527 RepID=A0A0E0KLI4_ORYPU) HSP 1 Score: 148 bits (374), Expect = 3.310e-43 Identity = 75/148 (50.68%), Postives = 102/148 (68.92%), Query Frame = 0 Query: 1 MSGVLFEDIFEVGKLNPDGKKFDKVNRLECKGLTYDVDILLDINCDIYPVKQGDRLTFVLASTLDLSGKPDDGTYKPMGDEITLADKYEYVMHGRVFRCEHLKDT------KVQLFASFGGLLMRLTGDQRHVANIEVDSRVFCLLRQ 142 M+ LFEDIF V +L+PDGKKFD+V+R+E + +D+ + LD+ D+YP+ GDR T VL TL+L G PD G + G + TLADKYEYVMHG++++ KDT KV+++ASFGGLLM L GD AN E+D R+F L+R+ Sbjct: 1 MAEFLFEDIFTVTRLDPDGKKFDRVSRIEARSDQFDMYMQLDVATDVYPMHPGDRFTMVLVPTLNLDGTPDSGFFTQAGRK-TLADKYEYVMHGKLYKISEDKDTSDQNAKKVEMYASFGGLLMMLKGDPSSAANFELDQRLFLLMRK 147 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig989.21163.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pages
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_F-serratus_M_contig989.21163.1 ID=prot_F-serratus_M_contig989.21163.1|Name=mRNA_F-serratus_M_contig989.21163.1|organism=Fucus serratus male|type=polypeptide|length=145bpback to top |