prot_F-serratus_M_contig986.21152.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig986.21152.1
Unique Nameprot_F-serratus_M_contig986.21152.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length184
Homology
BLAST of mRNA_F-serratus_M_contig986.21152.1 vs. uniprot
Match: D7FUB6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUB6_ECTSI)

HSP 1 Score: 81.6 bits (200), Expect = 8.340e-15
Identity = 67/111 (60.36%), Postives = 81/111 (72.97%), Query Frame = 0
Query:   74 VASFSSGSIWDEENDDYGPSNITGCRFDGNTATDGGAIYTAAGYDMVVDSSFTRNFAAVQGGALLHSGVLVALTXXXXXXXXXXXXXXXXXXXXXXXXXSALSFRNNSFFC 184
            +A FSSGS+     +  GP N T C F+ N+A DGGA Y+AAGYD+V D SF  NFAA+ GGALLHSGVLV + XXXXXXXXXXXXXXXXXXXX     + ++F  N+F+C
Sbjct:  210 MAFFSSGSL-----EGSGPVNTTACVFERNSADDGGAFYSAAGYDLVQDCSFQANFAALSGGALLHSGVLVGVHXXXXXXXXXXXXXXXXXXXXIAENFTDVTFAENTFYC 315          
BLAST of mRNA_F-serratus_M_contig986.21152.1 vs. uniprot
Match: D7FPF6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPF6_ECTSI)

HSP 1 Score: 75.9 bits (185), Expect = 9.440e-13
Identity = 39/68 (57.35%), Postives = 50/68 (73.53%), Query Frame = 0
Query:   80 GSIWDEEN-DDYGPSNITGCRFDGNTATDGGAIYTAAGYDMVVDSSFTRNFAAVQGGALLHSGVLVAL 146
            GS+W+ E+ DD GP+N T C F+ N+A DGGAIY+AAGYD++ DS F  N A    GA LHSG+LV+L
Sbjct:  393 GSVWNVESPDDSGPANTTTCVFERNSAEDGGAIYSAAGYDIISDSWFEDNIAVGSRGAYLHSGLLVSL 460          
BLAST of mRNA_F-serratus_M_contig986.21152.1 vs. uniprot
Match: A0A6H5JWI3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI3_9PHAE)

HSP 1 Score: 68.9 bits (167), Expect = 2.600e-10
Identity = 35/66 (53.03%), Postives = 44/66 (66.67%), Query Frame = 0
Query:   81 SIWDEENDDYGPSNITGCRFDGNTATDGGAIYTAAGYDMVVDSSFTRNFAAVQGGALLHSGVLVAL 146
            S++D+++   G  N T C F GN+A DGGA+Y+AAGYD + D  F  N A   GGA LHSGVLV L
Sbjct:  439 SLFDDDDPGSGSVNATMCVFQGNSAVDGGAMYSAAGYDGIKDCRFEDNLAVGSGGAYLHSGVLVEL 504          
BLAST of mRNA_F-serratus_M_contig986.21152.1 vs. uniprot
Match: A0A843INZ1_9EURY (Right-handed parallel beta-helix repeat-containing protein n=1 Tax=Methanobrevibacter sp. TaxID=66852 RepID=A0A843INZ1_9EURY)

HSP 1 Score: 53.5 bits (127), Expect = 5.390e-5
Identity = 41/111 (36.94%), Postives = 56/111 (50.45%), Query Frame = 0
Query:    8 TVFANNTAEIGGAIY-----SSDSALYVEAGTRFMFNVASTGSGGGVYASKSVMSINNTVFTDNHGVWGGGVASFSSGSIWDEENDDYGPSNITGCRFDGNTATD-GGAIY 112
            TVF NN A+IGGAIY     SS +         F  N A  G GG ++A ++  +I ++ FT+N  +  G  A    G+I+   +D     +I  C F  NTA D G AIY
Sbjct: 1514 TVFRNNKAKIGGAIYATRATSSTTGTLEINNCTFDNNTALQGQGGAIFAGRTPTTIKDSTFTNNQAI-SGSYAKGQGGAIYQTIDDTKSTMSIDNCVFVNNTAGDTGSAIY 1623          
BLAST of mRNA_F-serratus_M_contig986.21152.1 vs. uniprot
Match: A0A6H5JLP6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLP6_9PHAE)

HSP 1 Score: 53.1 bits (126), Expect = 6.910e-5
Identity = 50/136 (36.76%), Postives = 67/136 (49.26%), Query Frame = 0
Query:    3 SFGGETVFANNTAEI-GGAIYSSDSAL--YVEAGTRFMFNVASTGSGG----GVYASKSVMSINNTVFTDNHGVWGGGVASFSSGSIWDEENDDYGPSNITGCRFDGNTAT-DGGAIYTAAGYDMVVDSSFTRNFA 130
            S  G T F NN+ +  GGA+  S S    +    T+F+ NVA +  G     GV    +   I    F  N    GG V S  SG+      +++ P   TGC F GN AT  GGAI +AAG D+V++S+F  N A
Sbjct:  531 SIDGITSFFNNSCQFCGGALMISGSVSLSFASDSTQFLQNVAESSGGAVCLTGVGEGPTFSGIR---FDSNSAQIGGAVRSTGSGTTVLATGEEF-PVTYTGCNFTGNWATASGGAIESAAGKDLVLNSTFLGNTA 662          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig986.21152.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FUB6_ECTSI8.340e-1560.36Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FPF6_ECTSI9.440e-1357.35Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JWI3_9PHAE2.600e-1053.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A843INZ1_9EURY5.390e-536.94Right-handed parallel beta-helix repeat-containing... [more]
A0A6H5JLP6_9PHAE6.910e-536.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003368Polymorphic outer membrane protein repeatPFAMPF02415Chlam_PMPcoord: 8..23
e-value: 0.072
score: 13.6
coord: 98..113
e-value: 0.0079
score: 16.6
IPR003368Polymorphic outer membrane protein repeatTIGRFAMTIGR01376TIGR01376coord: 98..114
e-value: 6.2E-4
score: 17.5
coord: 6..25
e-value: 4.9E-5
score: 21.0
NoneNo IPR availablePANTHERPTHR19862FAMILY NOT NAMEDcoord: 3..181
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 93..182

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig986contigF-serratus_M_contig986:292376..293653 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig986.21152.1mRNA_F-serratus_M_contig986.21152.1Fucus serratus malemRNAF-serratus_M_contig986 292376..293653 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig986.21152.1 ID=prot_F-serratus_M_contig986.21152.1|Name=mRNA_F-serratus_M_contig986.21152.1|organism=Fucus serratus male|type=polypeptide|length=184bp
NASFGGETVFANNTAEIGGAIYSSDSALYVEAGTRFMFNVASTGSGGGVY
ASKSVMSINNTVFTDNHGVWGGGVASFSSGSIWDEENDDYGPSNITGCRF
DGNTATDGGAIYTAAGYDMVVDSSFTRNFAAVQGGALLHSGVLVALTGCT
FESNMAGEDGLAVMSLGIAENISALSFRNNSFFC
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003368POMP_repeat
IPR011050Pectin_lyase_fold/virulence