prot_F-serratus_M_contig98.21110.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig98.21110.1
Unique Nameprot_F-serratus_M_contig98.21110.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length380
Homology
BLAST of mRNA_F-serratus_M_contig98.21110.1 vs. uniprot
Match: A0A6H5L1F7_9PHAE (MMR_HSR1_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1F7_9PHAE)

HSP 1 Score: 393 bits (1010), Expect = 3.310e-132
Identity = 222/402 (55.22%), Postives = 273/402 (67.91%), Query Frame = 0
Query:    5 GVDIALIGRKSSCKTYFLKAASADD--LVDDALEARVWWTSSFAPNRADLIQAPEHGFCPSGNRLLPARLRHLTAADVAETEKE---------------RRGA------ILLVLSADFIFHKGKPRAGGSGI---HTAASRTKERLGL-QVPFAIAVSVDMDEIGEQQVASTVKTFLTSVKEDLAVEGIPVIAITPRTELWLREQVSEGGRVSYIPGGKQFRIPSAFETMMDRNAIAKARAAFDVCDGTGIVAAVSAAVALSPPTLVFPVGDFGTLQSLGWAGEGSPPAQLRTCRLLRASCTPRDVFEVEKKGGIYAGGDVTGAEAVPASADADARAVPATIELDAPIGPGAWAMRLTASQKAVKVWRVGEVAAGSRAKGDRPLASVQLGDLRSKERRRGRS 379
            GV +ALIGR S+CK+ FLKAAS+ D  L D A +A VWWTS  AP  ADL  APEHGF PSG RLLPA+L H + A V   E +               R+GA      +L+V+ A+  FHKG PR    G+     A SR +ERLG  QVP A+AVS D++  G    +S +K FL SVK+++A+EG+PV+AI+PRTELWLREQ SEGGRVSY  G  QFRI  AF+++MD+  I  ARAAFDVC GTGI+AA S A+ L PPTLVFPVGDF TLQS GW G+G+P A LRTCRL+R + + RD+F VEKK GI AG ++ GAEA  A  ++  RA P  ++LDAPIG GAW +RL  S+KA K+W     AA    KG +PLASVQ GDLRSK+RRRG+S
Sbjct:    7 GVRVALIGRNSTCKSLFLKAASSSDKLLPDTASDAEVWWTSPLAPREADLAHAPEHGFAPSGERLLPAQLNHASVASVLGEESKKSDGDRCEQAVADAARQGADEATPAVLMVVGAEISFHKGYPRPNRGGVTPVKAAVSRVRERLGGGQVPLAVAVSFDVEWDGGPSQSSAMKAFLQSVKDEMALEGVPVVAISPRTELWLREQESEGGRVSYRRGDSQFRIHPAFQSLMDKKEITNARAAFDVCGGTGILAAASTAIGLDPPTLVFPVGDFLTLQSSGWCGDGAPVATLRTCRLMRRNSSARDLFAVEKKEGILAG-ELVGAEASLAPTNSAGRAGPLPLDLDAPIGNGAWLVRLAGSRKAAKMWNAAPAAATG-GKGGKPLASVQFGDLRSKDRRRGKS 406          
BLAST of mRNA_F-serratus_M_contig98.21110.1 vs. uniprot
Match: A0A836CLS2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLS2_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 4.500e-17
Identity = 82/228 (35.96%), Postives = 109/228 (47.81%), Query Frame = 0
Query:  168 VIAITPRTELWLREQVSEGGRVSYIPGGKQF---RIPSAFETMMDRNAIAKARAAFDVCDGTGIVAAVSAAVAL-SPP-TLVFPVGDFGTLQSLGWAGEGSPPAQLRTCRLLRASCTPRDVFEVEKKGGIYA-GGDVTGAEAVPASADADARA--------------VPATIELDAPIGPGAWAMRLTASQKAVKVWRVGEVAAGSRAKGDRPLASVQLGDLRSKERR 375
            V A++P  E WL EQ  EGGR+S+  G   F    I  AF +++      +A AA   C G+GI AA+ AAV L SPP TLV PVGD  TLQSLGW G G+P A LR C  +    T   + E+ K        G++  A A+  S    A                V   +  +  IG G   + +  +++ V +W+ GE            L SVQ GDLRSK R+
Sbjct:   82 VFAVSPWLERWLAEQ-QEGGRLSHRRGSDSFVASAIKPAFASVIPAAEAWRAAAACRACGGSGIPAAIVAAVGLCSPPLTLVLPVGDLATLQSLGWEGVGAPRAALRDCLQVWPGTTAAQLCEILKSPPHERLSGELVQATALSVSWSRAAAXXXXXXXXXXXXXXXVVRQLRSNEAIGAGCHVVAIETTRRPVPMWQ-GEXXXXXXXXXXAKLPSVQFGDLRSKNRK 307          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig98.21110.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L1F7_9PHAE3.310e-13255.22MMR_HSR1_C domain-containing protein n=1 Tax=Ectoc... [more]
A0A836CLS2_9STRA4.500e-1735.96Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013646Uncharacterised GTP-binding protein, C-terminalPFAMPF08438MMR_HSR1_Ccoord: 167..249
e-value: 1.2E-7
score: 32.3
NoneNo IPR availablePANTHERPTHR23305:SF1coord: 167..289
NoneNo IPR availablePANTHERPTHR23305GTP-BINDING PROTEIN-RELATEDcoord: 167..289

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig98contigF-serratus_M_contig98:710642..716075 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig98.21110.1mRNA_F-serratus_M_contig98.21110.1Fucus serratus malemRNAF-serratus_M_contig98 710342..716097 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig98.21110.1 ID=prot_F-serratus_M_contig98.21110.1|Name=mRNA_F-serratus_M_contig98.21110.1|organism=Fucus serratus male|type=polypeptide|length=380bp
MDYTGVDIALIGRKSSCKTYFLKAASADDLVDDALEARVWWTSSFAPNRA
DLIQAPEHGFCPSGNRLLPARLRHLTAADVAETEKERRGAILLVLSADFI
FHKGKPRAGGSGIHTAASRTKERLGLQVPFAIAVSVDMDEIGEQQVASTV
KTFLTSVKEDLAVEGIPVIAITPRTELWLREQVSEGGRVSYIPGGKQFRI
PSAFETMMDRNAIAKARAAFDVCDGTGIVAAVSAAVALSPPTLVFPVGDF
GTLQSLGWAGEGSPPAQLRTCRLLRASCTPRDVFEVEKKGGIYAGGDVTG
AEAVPASADADARAVPATIELDAPIGPGAWAMRLTASQKAVKVWRVGEVA
AGSRAKGDRPLASVQLGDLRSKERRRGRS*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013646MMR_HSR1_C