prot_F-serratus_M_contig98.21106.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig98.21106.1
Unique Nameprot_F-serratus_M_contig98.21106.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length1140
Homology
BLAST of mRNA_F-serratus_M_contig98.21106.1 vs. uniprot
Match: D7FU95_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU95_ECTSI)

HSP 1 Score: 214 bits (546), Expect = 5.070e-53
Identity = 373/1197 (31.16%), Postives = 479/1197 (40.02%), Query Frame = 0
Query:  107 VVIPARLAYEVLIIRPQVGEIGSERAGSNHEYLPWVRSSGVVLYHGIREST-----ESMVQLVQGTDG---------HVGGDGDRYNGEASARRSSRRSGSRVLMQVEDEEDSYTYTARTQFYLCAEASVGLDDERLKETVIDEFFPDDDQVDGDSVIVTENPTPKFCSDVSDTEKEAWFVTVTNEADEDRSAATISAEQMEIVRSGNLTEALA-----EDVSAPASDFSYASLGYVVLYDEDQS-----SGGLSSEFQSVSGPDQWWPWWAXLLVALGLLLLCPCVICIYMYRSRYSDPPSPSGSGREGLSGGKFGSRAGESGSGSDKGGWSG---------ESGKDSYPEFSKDFSEKEFDNATGVSMDSPSDYSSRDPIRYEGDDAPRGNLVDVQTREDQGSA-WP-------------------------ATQAAATLSEVPS-EADIAAGLDQA------STSAELSATP----DESPPAPPTPPNVAAPAGQ-EHSFAKAQSGRSLG----GAXXXXXXXXXXXXXLASTAAVLGSSFRPRSILPS---------ITGGEKYNDEEN--------------------------------------------------------------------PDEERNDEIDSFAPALTR--------GLPSATKASESDXXXXXXXXXXXXXXXGAGDRGRHGAGRPRNLSGAGSDRFDERRNLTEEERQVRMQESDAARAASERRGSSSRVALHPDLERKIAVPEQVRRREAARQVDKKLAPGLYSAPSPPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSSAAGTMLSSVGRMFGMGSEAPATVPEDPEEEVPGEEETGLSGVVGAAVDAVTDAAAAVAAWTFG----------------------------DSAQDQGAGAGPEAGGEEVKEDASPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPRDLRPEEVEAYSANVDRTLEELPGVEEGEGDGERAMPMSELLARADMRARGGRPHEMQAQGSSPPSGPVASSQAREASPTTAAAAHGLDLARLIQNMEAG--SLEQIDESLTSPMVATPPALLRPGVGAAARGANS-RGRGLLNRPSASGSYVSSRSTSITED---NPALTEDDLSSDAQT---SRTSSYIAGGSSFEEGLAQAQAASGHF 1106
            VV+P R+AYEVL+ +P V E  S R     E  P + S  V    G   ST      ++V+   G  G           GG  D  +G   ++++  R G RVL    D+  S+TYT RTQF LCA     L+++ L+  ++D F  + +Q +G +  V +    +FC D S    E W + + NE  + +SAA ISA QME+VRS   T  LA      +++   +  +Y+SLGY+VLYDE+Q+     S  L S+F +  GPDQWWP                           ++ PPSPSG+G  G  G   GS  G +G    KGG  G         E G        KDF+    D ATG+S+     YS RD +   G       +V      +  S  WP                         A+Q     + V S EAD AAG+D +      STSA +S  P    D   PA     +   P G    S A  +S R       GA               +  A  G S  P    PS           GGE   DE+                                                                             ID  A  +          GLP + ++S +                   D       R R  S + S     +R+LTEEERQ+R+++S+AARAAS  RGSS +  LHPDLE  IAV +Q RRR+A + ++   AP   +  + P                                            G   AG  +S   R F   S  PA  P             G          A  D+ A  A +                               + A    AGA     G   ++  SP    XXXXXXXXXX                   L PEE  AYS NVDRTLE LP       DG  +MPMSELLARA++ A    P    A      S  VA SQ    SP+       LD+ARL+ N E G  +LE+++  L SP+VATPPALLRPGVGAA  G  + RGRGLL R SASGSY+SSRSTSITED   N  LTEDD+SSDAQT   SRTSS++A GSSFEE  AQ+QAA   F
Sbjct:    2 VVLPTRVAYEVLL-QPPVFE--SHRG----EPPPPLVSLAVPSATGSAASTAGSASRTLVKEGTGEGGGRRRLSDFSRDGGGSDGSDGLILSKKAGWR-GRRVLQT--DDSGSFTYTTRTQFDLCAAPGSELEEDALRAGIMDVFEVEQEQTEGTAGTVEKREVMEFCDDGS----EEWTIAIGNEPSDTQSAAVISAGQMELVRSSEFTTLLAASLEDSNLTVDPAGLTYSSLGYIVLYDEEQAVTAANSDSLDSDFVAFRGPDQWWP--------------------------GHAGPPSPSGAG--GGPGMFGGSTRGGTGKEVGKGGGGGNADWIAQQYEKGXXXXGYGDKDFN----DAATGISV-----YSPRDEVATSGSGVDSATVVQAAESPELASGEWPEAMESGVGMTGVTYTSNSRGGASTVASQQGDEATAVQSAEADRAAGVDPSRREHDTSTSA-ISMNPLVTSDSFNPAASGSGDGRVPGGYIGDSAASLESSRKSSEASWGASRKTVTPGDSGLLETTEEAEEGESPAPLISGPSGRTLGSAAAALGGEDSQDEDGRIGSGSAVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDGPAAVVXXXXXXTAVPGLPPSGRSSSNSSSRIQSV-----------DYPASRVARSRAASNSSSADELSQRDLTEEERQMRVEDSEAARAASVLRGSSFKTPLHPDLEHAIAVEQQDRRRQAVQGLEASRAPDSGTGAAEPVDLGSPADLPAEVVAAAITAAAAGDAEKEGEAAASPSPAATGFMGKVVAGMGMS---RFFAPRS--PANTPSAAXXXXXXXXXDGAEPTAEVEATAAGDSEAVPAQYVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEXANAHKAGASSREEGRPEQKLPSPSEAGXXXXXXXXXXPAAP---------------LGPEEARAYSENVDRTLEGLPI-----DDGGVSMPMSELLARAELEASAEHPAPAAALALLQQS--VAGSQ----SPS-------LDMARLLYNAEEGGMTLEEVEACLASPIVATPPALLRPGVGAARGGPGAPRGRGLLQRNSASGSYISSRSTSITEDMMSNNNLTEDDMSSDAQTTDVSRTSSFVATGSSFEENPAQSQAARNRF 1097          
BLAST of mRNA_F-serratus_M_contig98.21106.1 vs. uniprot
Match: A0A6H5JL50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL50_9PHAE)

HSP 1 Score: 208 bits (530), Expect = 5.660e-51
Identity = 412/1345 (30.63%), Postives = 539/1345 (40.07%), Query Frame = 0
Query:   71 TGGCRDGARGREASKVTPYRPGLVFLGQALLTFFVIVVIPARLAYEVLIIRPQVGEIGSERAGSNHEYLPWVRSSGVVLYHGIRESTESMVQLVQGTDGHVGGDGDRY----------NGEASARRSSRRSGSRVLMQVEDEEDSYTYTARTQFYLCAEASVGLDDERLKETVIDEFFPDDDQVDGDSVIVTENPTPKFCSDVSDTEKEAWFVTVTNEADEDRSAATISAEQMEIVRSGNLTEALAE-----DVSAPASDFSYASLGYVVLYDEDQS-----SGGLSSEFQSVSGPDQWWPWWAXLLVALGLLL-LCPCVICIYMYRSRYSDPPSPSGSGREGLSGGKFGSRAGESGSGSDKGGWSGESGKD-------------SYPEFSKDFSEKEF-DNATGVSMDSPSD---------------YSSRDPIRYEGD-----DAPRGNLVDVQTREDQGSAWP-ATQAAATLSEVPS-EADIAAGLDQA-----STSAELSATPDESPPAPPTPPNVAAPAGQEHSFAKAQSGRSLGGAXXXXXXXXXXXXXLASTAAVLGSSFRPRSIL-----PSITGGEKYNDEENPDEERNDEIDSFAPALT----RGLPSATKA-SESDXXXXXXXXXXXXXXX-------------------------------------------------------------------------------GAGDRGR-------------HGAGRP-RNLSGAGSDRFDE--RRNLTEEERQVRMQESDAARAASERRGSSSRVALHPDLERKIAVPEQVRRREAARQVDKKLAPGLYSAPSPPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSSAAGTMLSSVGRMFGMGS--------EAPATVPEDPEEEVPGEEETGLSGVVGAAVDAVTDAAAAVAAWTFGDSAQDQGAGA--------GPEAGG-----EEVKEDA------------SPPXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------------------------------------SPRD----------------LRPEEVEAYSANVDRTLEELPGVEEGEGDGERAMPMSELLARADMRARGGRP--------------------HEMQAQGSSP----------------------PSGP----VASSQAREASPTTAAAAHGLDLARLIQNMEAG--SLEQIDESLTSPMVATPPALLRPGVGAAARGANSRGRGLLNRPSASGSYVSSRSTSITED---NPALTEDDLSSDAQT---SRTSSYIAGGSSFEEGLAQAQAASGHF 1106
            +GG ++G  GR        RP LVF+ QA+L+F  +VV+P R+AY+VL+ +P+V E  S R                                                         +G  S++++  RS  R ++Q  D+ DS+TYT+RTQF LCA     L+++ L+  ++D F  + +Q +G +  V +    +FC D S    E W + + NE  + +SAA ISA QME+VRS   T  LA      ++S   +  +Y+SLGY+VLYDEDQ+     S  L S+F +  GPDQWWPW  XLL  L LL  +CP   CIY YR   + PPSPSG+G      G FG        GS +GG   E G+                      + +K+F D ATG+S+ SP +                ++  P    G+     ++  G      T   +G A   A+Q     + V S EAD AAG+D +     +T++ LS  P  +                  SF  A SG   G               +  +AA L SS + R         ++T G+    E     E  DE DS AP ++    R L SA  A  E D          XXXXX                                                                               G    GR             H A R  R+ + + S   DE  +R+LTEEE Q+R+++++AARAAS  RGSS +  L PDLER IAV EQ RRR+A + V+  LAP   +  + P                                            G   AG M   + R+FG  S         A AT   D  E    E E   +G   A       AA AVA     + AQ   AGA        GP A G     +E + +             +PP          XXXXXXXXXXXXXXXXXX                                       SP +                L PEE  AYS NVDRTLE LP       DG  +MPMSELLARA++ A    P                      +   G+S                       P+GP    V  S A   SP+       LD+AR +   E G  +L+++D  L SP+VATPPALLRPGVGA       R  GLL R SASGSY+SSRSTSITED   N  LTEDD+SSDAQT   SRTSS++A GSSFEE  AQ+QAA   F
Sbjct:   76 SGGGKEGTGGR--------RPALVFVAQAVLSFVGMVVLPTRVAYDVLL-QPRVFE--SHRGEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGLVSSKKAGWRS--RRVLQT-DDGDSFTYTSRTQFDLCAAPGSELEEDALRAGIMDVFEVEQEQTEGTTGTVEKREVTEFCDDGS----EEWTIAIGNEPSDTQSAAVISAGQMELVRSSEFTTLLASSLEDSNLSVNPAGLTYSSLGYIVLYDEDQAVTTANSDSLDSDFVAFRGPDQWWPWXXXLLFGLVLLCCICPLAACIYYYRPGLAGPPSPSGAGG---GPGMFG--------GSTRGGTRKEIGRGXXXXNADWITQQYEXXXXXXGYGDKDFNDAATGISVYSPQEEVATSASGGDSATVVQAAESPQVASGEWPEAIESGVGTTGVTYTSTSRGGASSVASQQGDEATAVQSAEADRAAGVDPSRREHDTTTSALSIKPLVT----------------SGSFNPAASGSGDG---------RVPGGYMGDSAASLESSQKSREASWGVSRKTVTPGDSGLLEAT---EEADEGDSPAPLISGPSGRTLGSAAAALGEEDSQDEDERIGSXXXXXXXXXXXXQSAVSYRTADGSASVQSTSTLAPLDAKTEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVPGLPPSGRSSSNSSSRIQSVDHPASRAVRSRAASNSSSADELSQRDLTEEEHQMRVEDAEAARAASVLRGSSFKTPLQPDLERAIAVEEQERRRQAVQAVEASLAPDSGTGAAEPVDLGSPADLPAEAVTAAIAASATGDTEKEGGASVSSSPAATGFMGKVVAG-MGMGMSRIFGPRSPANTPSAASAAATAAADGAEPTV-EVEATAAGDSKAVPSQDVAAAGAVAGVPPPEQAQAGDAGADADAAEGEGPAATGVLPPMDEGESEXXXXXXXXXXXXXAPPAAIAAAAAGAXXXXXXXXXXXXXXXXXXXXXXXAGVADSGXXXXXXXXDQKAGASSREEGRPEQVLPSPSEAGAAXXXXXXAVPAAALGPEEARAYSENVDRTLEGLPI-----DDGGVSMPMSELLARAELEASIEHPTPTPTVPPLSAXXXXXXXXXXAVPPMGASXXXXXXXXXXXXXXXXXXXXXXXPAGPRLAMVQQSVAGSPSPS-------LDMARFLHTAEEGGMTLDEVDACLASPIVATPPALLRPGVGAPRA---PRSGGLLQRNSASGSYMSSRSTSITEDVISNNNLTEDDMSSDAQTTDVSRTSSFVATGSSFEENPAQSQAARSRF 1346          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig98.21106.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FU95_ECTSI5.070e-5331.16Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JL50_9PHAE5.660e-5130.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 670..690
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 376..1140
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 352..375
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 116..351
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..92
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 93..115
NoneNo IPR availableTMHMMTMhelixcoord: 93..115

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig98contigF-serratus_M_contig98:588864..630869 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig98.21106.1mRNA_F-serratus_M_contig98.21106.1Fucus serratus malemRNAF-serratus_M_contig98 588807..630869 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig98.21106.1 ID=prot_F-serratus_M_contig98.21106.1|Name=mRNA_F-serratus_M_contig98.21106.1|organism=Fucus serratus male|type=polypeptide|length=1140bp
MDFREKEQGDRRSSPEGAAMRRASLRRRREYQTCFGAIDDFGEAPKWGRV
WDWGAVVAGVNRGRCPRSISTGGCRDGARGREASKVTPYRPGLVFLGQAL
LTFFVIVVIPARLAYEVLIIRPQVGEIGSERAGSNHEYLPWVRSSGVVLY
HGIRESTESMVQLVQGTDGHVGGDGDRYNGEASARRSSRRSGSRVLMQVE
DEEDSYTYTARTQFYLCAEASVGLDDERLKETVIDEFFPDDDQVDGDSVI
VTENPTPKFCSDVSDTEKEAWFVTVTNEADEDRSAATISAEQMEIVRSGN
LTEALAEDVSAPASDFSYASLGYVVLYDEDQSSGGLSSEFQSVSGPDQWW
PWWAWLLVALGLLLLCPCVICIYMYRSRYSDPPSPSGSGREGLSGGKFGS
RAGESGSGSDKGGWSGESGKDSYPEFSKDFSEKEFDNATGVSMDSPSDYS
SRDPIRYEGDDAPRGNLVDVQTREDQGSAWPATQAAATLSEVPSEADIAA
GLDQASTSAELSATPDESPPAPPTPPNVAAPAGQEHSFAKAQSGRSLGGA
AAALGGEDDEESSLASTAAVLGSSFRPRSILPSITGGEKYNDEENPDEER
NDEIDSFAPALTRGLPSATKASESDPDPDDSNQSSSGKSSGAGDRGRHGA
GRPRNLSGAGSDRFDERRNLTEEERQVRMQESDAARAASERRGSSSRVAL
HPDLERKIAVPEQVRRREAARQVDKKLAPGLYSAPSPPPAAPSSGSMSGG
AEGGPDEDVERATERSPVEGSAASSSDSTSPSGSSAAGTMLSSVGRMFGM
GSEAPATVPEDPEEEVPGEEETGLSGVVGAAVDAVTDAAAAVAAWTFGDS
AQDQGAGAGPEAGGEEVKEDASPPPQPLGMGAGAAAAAAGGSRDGSGNGD
SDSPRDLRPEEVEAYSANVDRTLEELPGVEEGEGDGERAMPMSELLARAD
MRARGGRPHEMQAQGSSPPSGPVASSQAREASPTTAAAAHGLDLARLIQN
MEAGSLEQIDESLTSPMVATPPALLRPGVGAAARGANSRGRGLLNRPSAS
GSYVSSRSTSITEDNPALTEDDLSSDAQTSRTSSYIAGGSSFEEGLAQAQ
AASGHFHGAVPQGSGTGGGAHGITGGGGSHGGGGGGGGGG
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