prot_F-serratus_M_contig98.21095.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig98.21095.1
Unique Nameprot_F-serratus_M_contig98.21095.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length341
Homology
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BLAST of mRNA_F-serratus_M_contig98.21095.1 vs. uniprot
Match: D8LSY1_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSY1_ECTSI)

HSP 1 Score: 319 bits (818), Expect = 7.320e-104
Identity = 183/357 (51.26%), Postives = 230/357 (64.43%), Query Frame = 0 
Query:    1 MFDWEDERLEDRCLDLEGK--RHAGPLAALSDTLTKLPRLKVLDLSRCTLLGRTGHRYRGLITLGRALAY-KRITRLRISDNSLHSEAALIVGGWLREMPKLRYLDISDRAGFVALCGSLVDLFYLRTLLMRDVGIDDVGAEEMAAYISSSVCIQCLNLSSNQIHVGGARYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLSSNGLTVG-------------VKDSLVGAALASSTIEIYGLAGNDIPPVDVEEIQEHASANVELRAVAQDPESYDLSKVSSIVRESLVTKFDLLPEGVAQVLKGNRSFVDKDGPIRDAVFSAAPPPTKAELMTNSAGKQQVA 341
            MFDWEDE LE+RCLD++ K  R+ GPL AL+DTLT L RLKVLDLS CTL+G  G+RY GL  LG   A  K++T LRIS NSLHSEAALIVGGWL  +PKLRYLD+S R+GF +LCG+     +LRTLL+RDVG+DD  AE +A++++ S  ++ L+LS NQ+HV GARY                                          D+SSNGLT G             VK+  + AALAS +IE + L+GNDIPP DVEE+Q +AS+NVELRAVA  PESYDL + S IV   LV KFD LP GVA  LK N +F++++GP+R+AV +A+P  TK EL+ NS G   +A
Sbjct:    7 MFDWEDEALEERCLDIQDKEQRYVGPLVALADTLTSLSRLKVLDLSNCTLIGLAGNRYHGLNALGNTFASGKKLTHLRISGNSLHSEAALIVGGWLPSLPKLRYLDLSSRSGFDSLCGAFRTSLHLRTLLLRDVGMDDGEAEGVASFLALSARLEKLDLSDNQLHVRGARYLAGALRSNGSLSSLLLGHNRIGNEGALLLAASVPHAASLVELDVSSNGLTGGXXXXXXXXYTKKSVKEGFIEAALASYSIETFRLSGNDIPPSDVEEMQGYASSNVELRAVADAPESYDLWQASEIVETCLVAKFDRLPPGVADALKKNPTFIEEEGPMREAVLAASPL-TKQELLRNSPGADDIA 362
[Close]
BLAST of mRNA_F-serratus_M_contig98.21095.1 vs. uniprot
Match: A0A6H5LDS7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDS7_9PHAE)

HSP 1 Score: 248 bits (632), Expect = 1.720e-76
Identity = 164/410 (40.00%), Postives = 205/410 (50.00%), Query Frame = 0 
Query:    1 MFDWEDERLEDRCLDLEGK--------------------------------------------------------------------RHAGPLAALSDTLTKLPRLKVLDLSRCTLLGRTGHRYRGLITLGRALAY-KRITRLRISDNSLHSEAALIVGGWLREMPKLRYLDISDRAGFVALCGSLVDLFYLRTLLMRDVGIDDVGAEEMAAYISSSVCIQCLNLSSNQIHVGGARYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLSSNGLTVGVKDSLVGAALASSTIEIYGLAGNDIPPVDVEEIQEHASANVELRAVAQDPESYDLSKVSSIVRESLVTKFDLLPEGVAQVLKGNRSFVDKDGPIRDAVFSAAPPPTKAELMTNSAGKQQVA 341
            MFDWEDE LE+RCLDL+ K                                                                    R+ GPL AL+DTLT L RLKVLDLS CTL+G +G+RY GL  LG  LA  K++T LRIS N LHSEAALIVGGWL  +PKLRYLD+S R+GF  LCG+     +LRTLL+RDVG+DD+ AE +A++++ SV ++ L+LS NQ                                                                               L+GNDIPP DVEE+QE+AS+NVELRAVA  PESYDL + S IV   LV KFD LP GVA  LK N +FV+++GP+R+AV +A+P  TK EL+ NS G + +A
Sbjct:    7 MFDWEDEALEERCLDLQDKNISTSDIGAFLQSLDGLHDVSSLKVVNLAGNRVGSKRESMVPIDTLLTASARSLTALNFCGNPLGEEQRYVGPLVALADTLTSLSRLKVLDLSNCTLIGLSGNRYHGLNALGNTLASGKKLTHLRISGNRLHSEAALIVGGWLPSLPKLRYLDLSSRSGFDPLCGAFRTSLHLRTLLLRDVGMDDLEAEGVASFLALSVRLEKLDLSENQER-----------------------------------------------------------------------------LSGNDIPPSDVEEMQEYASSNVELRAVADAPESYDLWQASEIVETCLVAKFDRLPPGVADALKKNPTFVEEEGPMREAVLAASPL-TKQELLRNSPGAEDIA 338
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig98.21095.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LSY1_ECTSI7.320e-10451.26Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5LDS7_9PHAE1.720e-7640.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00368LRR_RI_2coord: 176..203
e-value: 0.027
score: 23.6
coord: 68..95
e-value: 140.0
score: 1.9
coord: 148..175
e-value: 1.0
score: 17.0
coord: 204..232
e-value: 39.0
score: 5.9
NoneNo IPR availablePANTHERPTHR24113FAMILY NOT NAMEDcoord: 108..265
coord: 25..106
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 26..263
IPR001611Leucine-rich repeatPFAMPF13516LRR_6coord: 205..218
e-value: 0.3
score: 11.3
coord: 178..198
e-value: 0.003
score: 17.5
coord: 150..170
e-value: 0.45
score: 10.7
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 6..278
e-value: 1.5E-39
score: 137.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig98contigF-serratus_M_contig98:393446..416086 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig98.21095.1mRNA_F-serratus_M_contig98.21095.1Fucus serratus malemRNAF-serratus_M_contig98 393446..416086 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig98.21095.1 ID=prot_F-serratus_M_contig98.21095.1|Name=mRNA_F-serratus_M_contig98.21095.1|organism=Fucus serratus male|type=polypeptide|length=341bp
MFDWEDERLEDRCLDLEGKRHAGPLAALSDTLTKLPRLKVLDLSRCTLLG
RTGHRYRGLITLGRALAYKRITRLRISDNSLHSEAALIVGGWLREMPKLR
YLDISDRAGFVALCGSLVDLFYLRTLLMRDVGIDDVGAEEMAAYISSSVC
IQCLNLSSNQIHVGGARYLATAMRSNGTLRSLILARNRIGDSGGQLLATS
IPHAASLTELDLSSNGLTVGVKDSLVGAALASSTIEIYGLAGNDIPPVDV
EEIQEHASANVELRAVAQDPESYDLSKVSSIVRESLVTKFDLLPEGVAQV
LKGNRSFVDKDGPIRDAVFSAAPPPTKAELMTNSAGKQQVA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf